RNA–Protein interactions for RNA: ENST00000555379.1

LINC00641-201, long intergenic non-protein coding RNA 641, humanhuman

Gene LINC00641, Length 5,425 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00641-201ENST00000555379 NISCHQ9Y2I1 1504 aa14.78□□□□□ -0.04
LINC00641-201ENST00000555379 DCAF8L2P0C7V8 631 aa14.43□□□□□ -0.1
LINC00641-201ENST00000555379 MYT1Q01538 1121 aa14□□□□□ -0.17
LINC00641-201ENST00000555379 PELP1Q8IZL8 1130 aaKnown RBP13.77□□□□□ -0.21
LINC00641-201ENST00000555379 FAM9AQ8IZU1 332 aaPredicted RBP13.75□□□□□ -0.21
LINC00641-201ENST00000555379 SUPT5HO00267 1087 aaKnown RBP13.39□□□□□ -0.27
LINC00641-201ENST00000555379 APLP2Q06481 763 aa13.31□□□□□ -0.28
LINC00641-201ENST00000555379 SHROOM4Q9ULL8 1493 aa13.18□□□□□ -0.3
LINC00641-201ENST00000555379 TTBK1Q5TCY1 1321 aaPredicted RBP12.96□□□□□ -0.33
LINC00641-201ENST00000555379 TRIM41Q8WV44 630 aa12.79□□□□□ -0.36
LINC00641-201ENST00000555379 ERICH6Q7L0X2 663 aa12.74□□□□□ -0.37
LINC00641-201ENST00000555379 ZEB1P37275 1124 aaPredicted RBP12.71□□□□□ -0.37
LINC00641-201ENST00000555379 CCDC180Q9P1Z9 1646 aa12.67□□□□□ -0.38
LINC00641-201ENST00000555379 UBTFP17480 764 aaKnown RBP12.6□□□□□ -0.39
LINC00641-201ENST00000555379 CCER1Q8TC90 406 aaPredicted RBP12.59□□□□□ -0.39
LINC00641-201ENST00000555379 ABCC9O60706 1549 aa12.59□□□□□ -0.39
LINC00641-201ENST00000555379 CENPBP07199 599 aaPredicted RBP12.53□□□□□ -0.4
LINC00641-201ENST00000555379 ATP1B4Q9UN42 357 aaPredicted RBP12.49□□□□□ -0.41
LINC00641-201ENST00000555379 EHMT2Q96KQ7 1210 aa12.41□□□□□ -0.42
LINC00641-201ENST00000555379 YTHDC1Q96MU7 727 aaKnown RBP12.4□□□□□ -0.42
LINC00641-201ENST00000555379 RB1CC1Q8TDY2 1594 aa12.36□□□□□ -0.43
LINC00641-201ENST00000555379 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.3□□□□□ -0.44
LINC00641-201ENST00000555379 HNRNPUL2Q1KMD3 747 aaKnown RBP12.3□□□□□ -0.44
LINC00641-201ENST00000555379 MYT1LQ9UL68 1186 aa12.3□□□□□ -0.44
LINC00641-201ENST00000555379 NACADO15069 1562 aa12.28□□□□□ -0.44
LINC00641-201ENST00000555379 ZCCHC6Q5VYS8 1495 aaKnown RBP12.25□□□□□ -0.45
LINC00641-201ENST00000555379 RANGAP1P46060 587 aaPredicted RBP12.24□□□□□ -0.45
LINC00641-201ENST00000555379 PABPN1Q86U42 306 aaKnown RBP eCLIP12.19□□□□□ -0.46
LINC00641-201ENST00000555379 PCGF6Q9BYE7 350 aa12.15□□□□□ -0.46
LINC00641-201ENST00000555379 NEFLP07196 543 aa12.15□□□□□ -0.46
LINC00641-201ENST00000555379 CDK11AQ9UQ88 783 aaPredicted RBP12.14□□□□□ -0.47
LINC00641-201ENST00000555379 ACIN1Q9UKV3 1341 aaKnown RBP12.14□□□□□ -0.47
LINC00641-201ENST00000555379 SCRIBQ14160 1630 aa12.12□□□□□ -0.47
LINC00641-201ENST00000555379 TRIM26Q12899 539 aaPredicted RBP12.12□□□□□ -0.47
LINC00641-201ENST00000555379 DCAF1Q9Y4B6 1507 aa12.09□□□□□ -0.47
LINC00641-201ENST00000555379 NPM1P06748 294 aaKnown RBP eCLIP12.02□□□□□ -0.49
LINC00641-201ENST00000555379 CHIC1Q5VXU3 224 aa12.01□□□□□ -0.49
LINC00641-201ENST00000555379 GLIPR1L2Q4G1C9 344 aa11.96□□□□□ -0.49
LINC00641-201ENST00000555379 EEA1Q15075 1411 aa11.94□□□□□ -0.5
LINC00641-201ENST00000555379 MYO15BQ96JP2 1530 aa11.92□□□□□ -0.5
LINC00641-201ENST00000555379 ESF1Q9H501 851 aaKnown RBP11.91□□□□□ -0.5
LINC00641-201ENST00000555379 FBLN2P98095 1184 aa11.9□□□□□ -0.5
LINC00641-201ENST00000555379 CSRNP3Q8WYN3 585 aa11.89□□□□□ -0.51
LINC00641-201ENST00000555379 FAM50AQ14320 339 aaKnown RBP11.84□□□□□ -0.51
LINC00641-201ENST00000555379 RTL5Q5HYW3 569 aaPredicted RBP11.84□□□□□ -0.51
LINC00641-201ENST00000555379 BAZ1AQ9NRL2 1556 aaPredicted RBP11.83□□□□□ -0.52
LINC00641-201ENST00000555379 BAZ1BQ9UIG0 1483 aaKnown RBP11.82□□□□□ -0.52
LINC00641-201ENST00000555379 TRIM52Q96A61 297 aa11.82□□□□□ -0.52
LINC00641-201ENST00000555379 ITGAEP38570 1179 aa11.81□□□□□ -0.52
LINC00641-201ENST00000555379 NEFMP07197 916 aa11.8□□□□□ -0.52
LINC00641-201ENST00000555379 HRCP23327 699 aa11.78□□□□□ -0.52
LINC00641-201ENST00000555379 DAXXQ9UER7 740 aaPredicted RBP11.77□□□□□ -0.53
LINC00641-201ENST00000555379 RSF1Q96T23 1441 aaPredicted RBP11.75□□□□□ -0.53
LINC00641-201ENST00000555379 SMARCA2P51531 1590 aa11.73□□□□□ -0.53
LINC00641-201ENST00000555379 CHMP7Q8WUX9 453 aaPredicted RBP11.73□□□□□ -0.53
LINC00641-201ENST00000555379 SLC4A1APQ9BWU0 796 aaKnown RBP11.71□□□□□ -0.53
LINC00641-201ENST00000555379 ERCC6Q03468 1493 aa11.7□□□□□ -0.54
LINC00641-201ENST00000555379 SLC24A1O60721 1099 aa11.69□□□□□ -0.54
LINC00641-201ENST00000555379 POLR3GLQ9BT43 218 aa11.69□□□□□ -0.54
LINC00641-201ENST00000555379 KIF27Q86VH2 1401 aa11.67□□□□□ -0.54
LINC00641-201ENST00000555379 ZBTB47Q9UFB7 747 aaPredicted RBP11.66□□□□□ -0.54
LINC00641-201ENST00000555379 PDS5BQ9NTI5 1447 aa11.65□□□□□ -0.55
LINC00641-201ENST00000555379 TSPY4P0CV99 314 aa11.64□□□□□ -0.55
LINC00641-201ENST00000555379 TSPY10P0CW01 314 aa11.64□□□□□ -0.55
LINC00641-201ENST00000555379 STAG3Q9UJ98 1225 aa11.62□□□□□ -0.55
LINC00641-201ENST00000555379 BCANQ96GW7 911 aa11.62□□□□□ -0.55
LINC00641-201ENST00000555379 GOLGA3Q08378 1498 aa11.6□□□□□ -0.55
LINC00641-201ENST00000555379 WRNQ14191 1432 aaPredicted RBP eCLIP11.59□□□□□ -0.55
LINC00641-201ENST00000555379 MTUS2Q5JR59 1369 aa11.59□□□□□ -0.55
LINC00641-201ENST00000555379 ANP32CO43423 234 aa11.58□□□□□ -0.56
LINC00641-201ENST00000555379 PLEKHD1A6NEE1 506 aa11.57□□□□□ -0.56
LINC00641-201ENST00000555379 LOC105371045A0A1W2PR82 267 aa11.56□□□□□ -0.56
LINC00641-201ENST00000555379 EIF5BO60841 1220 aaKnown RBP11.56□□□□□ -0.56
LINC00641-201ENST00000555379 CEP164Q9UPV0 1460 aa11.56□□□□□ -0.56
LINC00641-201ENST00000555379 ABCC8Q09428 1581 aa11.54□□□□□ -0.56
LINC00641-201ENST00000555379 ZNF777Q9ULD5 760 aaPredicted RBP11.54□□□□□ -0.56
LINC00641-201ENST00000555379 FHAD1B1AJZ9 1412 aa11.53□□□□□ -0.56
LINC00641-201ENST00000555379 CLSPNQ9HAW4 1339 aa11.52□□□□□ -0.57
LINC00641-201ENST00000555379 PPARGC1BQ86YN6 1023 aaKnown RBP11.51□□□□□ -0.57
LINC00641-201ENST00000555379 TONSLQ96HA7 1378 aa11.51□□□□□ -0.57
LINC00641-201ENST00000555379 CARMIL2Q6F5E8 1435 aa11.5□□□□□ -0.57
LINC00641-201ENST00000555379 CLIP1P30622 1438 aa11.49□□□□□ -0.57
LINC00641-201ENST00000555379 HDGFP51858 240 aaKnown RBP11.47□□□□□ -0.57
LINC00641-201ENST00000555379 P3H3Q8IVL6 736 aa11.46□□□□□ -0.57
LINC00641-201ENST00000555379 CDCA8Q53HL2 280 aa11.46□□□□□ -0.58
LINC00641-201ENST00000555379 GTF3C3Q9Y5Q9 886 aa11.45□□□□□ -0.58
LINC00641-201ENST00000555379 BCL11AQ9H165 835 aa11.45□□□□□ -0.58
LINC00641-201ENST00000555379 NEUROD1Q13562 356 aa11.44□□□□□ -0.58
LINC00641-201ENST00000555379 ZNF326Q5BKZ1 582 aaKnown RBP11.43□□□□□ -0.58
LINC00641-201ENST00000555379 ZNF316A6NFI3 1004 aaPredicted RBP11.42□□□□□ -0.58
LINC00641-201ENST00000555379 TNIKQ9UKE5 1360 aa11.41□□□□□ -0.58
LINC00641-201ENST00000555379 CEP162Q5TB80 1403 aa11.41□□□□□ -0.58
LINC00641-201ENST00000555379 KANK1Q14678 1352 aa11.4□□□□□ -0.58
LINC00641-201ENST00000555379 CANXP27824 592 aaKnown RBP11.4□□□□□ -0.59
LINC00641-201ENST00000555379 TOP2AP11388 1531 aaKnown RBP11.38□□□□□ -0.59
LINC00641-201ENST00000555379 DIEXFQ68CQ4 756 aaKnown RBP11.38□□□□□ -0.59
LINC00641-201ENST00000555379 CHGAP10645 457 aaKnown RBP11.37□□□□□ -0.59
LINC00641-201ENST00000555379 PPP1R15AO75807 674 aaPredicted RBP11.35□□□□□ -0.59
LINC00641-201ENST00000555379 GOLGA6L2Q8N9W4 650 aaPredicted RBP11.34□□□□□ -0.59
LINC00641-201ENST00000555379 CADPSQ9ULU8 1353 aa11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 84.2 ms