RNA–Protein interactions for RNA: ENST00000555246.5

LINC00871-201, long intergenic non-protein coding RNA 871, humanhuman

TSL 5 BASIC

Gene LINC00871, Length 408 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00871-201ENST00000555246 FRMPD1Q5SYB0 1578 aa8.44□□□□□ -1.06
LINC00871-201ENST00000555246 FHOD3Q2V2M9 1422 aa8.44□□□□□ -1.06
LINC00871-201ENST00000555246 HECW2Q9P2P5 1572 aa8.44□□□□□ -1.06
LINC00871-201ENST00000555246 KCNH8Q96L42 1107 aa8.43□□□□□ -1.06
LINC00871-201ENST00000555246 ZMYM4Q5VZL5 1548 aa8.42□□□□□ -1.06
LINC00871-201ENST00000555246 ARHGEF40Q8TER5 1519 aa8.42□□□□□ -1.06
LINC00871-201ENST00000555246 CFAP74Q9C0B2 1584 aa8.42□□□□□ -1.06
LINC00871-201ENST00000555246 ADAMTSL3P82987 1691 aa8.41□□□□□ -1.06
LINC00871-201ENST00000555246 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP8.41□□□□□ -1.06
LINC00871-201ENST00000555246 P3H3Q8IVL6 736 aa8.4□□□□□ -1.06
LINC00871-201ENST00000555246 FANCAO15360 1455 aa8.39□□□□□ -1.07
LINC00871-201ENST00000555246 RICTORQ6R327 1708 aa8.39□□□□□ -1.07
LINC00871-201ENST00000555246 TTC37Q6PGP7 1564 aa8.39□□□□□ -1.07
LINC00871-201ENST00000555246 PTPRMP28827 1452 aa8.38□□□□□ -1.07
LINC00871-201ENST00000555246 MAGI2Q86UL8 1455 aa8.38□□□□□ -1.07
LINC00871-201ENST00000555246 FMN1Q68DA7 1419 aa8.38□□□□□ -1.07
LINC00871-201ENST00000555246 DENND4BO75064 1496 aaPredicted RBP8.38□□□□□ -1.07
LINC00871-201ENST00000555246 AKNAQ7Z591 1439 aa8.37□□□□□ -1.07
LINC00871-201ENST00000555246 BCORL1Q5H9F3 1711 aa8.37□□□□□ -1.07
LINC00871-201ENST00000555246 HECW1Q76N89 1606 aa8.37□□□□□ -1.07
LINC00871-201ENST00000555246 PLEKHD1A6NEE1 506 aa8.37□□□□□ -1.07
LINC00871-201ENST00000555246 RAPGEF3O95398 923 aa8.37□□□□□ -1.07
LINC00871-201ENST00000555246 ARHGAP35Q9NRY4 1499 aa8.37□□□□□ -1.07
LINC00871-201ENST00000555246 PLCH2O75038 1416 aa8.37□□□□□ -1.07
LINC00871-201ENST00000555246 CDK13Q14004 1512 aaKnown RBP8.36□□□□□ -1.07
LINC00871-201ENST00000555246 ARID3CA6NKF2 412 aa8.36□□□□□ -1.07
LINC00871-201ENST00000555246 POGZQ7Z3K3 1410 aa8.36□□□□□ -1.07
LINC00871-201ENST00000555246 MADDQ8WXG6 1647 aa8.34□□□□□ -1.07
LINC00871-201ENST00000555246 ZNF219Q9P2Y4 722 aaPredicted RBP8.34□□□□□ -1.07
LINC00871-201ENST00000555246 PCF11O94913 1555 aaKnown RBP8.34□□□□□ -1.07
LINC00871-201ENST00000555246 ZFYVE16Q7Z3T8 1539 aa8.34□□□□□ -1.08
LINC00871-201ENST00000555246 KDM5CP41229 1560 aa8.33□□□□□ -1.08
LINC00871-201ENST00000555246 KIF14Q15058 1648 aa8.32□□□□□ -1.08
LINC00871-201ENST00000555246 LMTK3Q96Q04 1460 aa8.32□□□□□ -1.08
LINC00871-201ENST00000555246 TROQ12816 1431 aaPredicted RBP8.32□□□□□ -1.08
LINC00871-201ENST00000555246 ZNF518AQ6AHZ1 1483 aa8.32□□□□□ -1.08
LINC00871-201ENST00000555246 REREQ9P2R6 1566 aa8.31□□□□□ -1.08
LINC00871-201ENST00000555246 YEATS2Q9ULM3 1422 aa8.31□□□□□ -1.08
LINC00871-201ENST00000555246 ILDR1Q86SU0 546 aaPredicted RBP8.31□□□□□ -1.08
LINC00871-201ENST00000555246 SPINK5Q9NQ38 1064 aaPredicted RBP8.31□□□□□ -1.08
LINC00871-201ENST00000555246 SIGLEC1Q9BZZ2 1709 aa8.31□□□□□ -1.08
LINC00871-201ENST00000555246 SCAPERQ9BY12 1400 aa8.3□□□□□ -1.08
LINC00871-201ENST00000555246 ARHGEF12Q9NZN5 1544 aa8.3□□□□□ -1.08
LINC00871-201ENST00000555246 MYO5CQ9NQX4 1742 aa8.3□□□□□ -1.08
LINC00871-201ENST00000555246 CAPN15O75808 1086 aa8.3□□□□□ -1.08
LINC00871-201ENST00000555246 CDK11AQ9UQ88 783 aaPredicted RBP8.3□□□□□ -1.08
LINC00871-201ENST00000555246 CCDC18Q5T9S5 1454 aa8.3□□□□□ -1.08
LINC00871-201ENST00000555246 C9orf84Q5VXU9 1444 aa8.29□□□□□ -1.08
LINC00871-201ENST00000555246 CASKIN1Q8WXD9 1431 aa8.29□□□□□ -1.08
LINC00871-201ENST00000555246 CLIP1P30622 1438 aa8.29□□□□□ -1.08
LINC00871-201ENST00000555246 ATP10AO60312 1499 aa8.28□□□□□ -1.08
LINC00871-201ENST00000555246 RIMS1Q86UR5 1692 aaKnown RBP8.27□□□□□ -1.08
LINC00871-201ENST00000555246 FYCO1Q9BQS8 1478 aa8.27□□□□□ -1.09
LINC00871-201ENST00000555246 MLH3Q9UHC1 1453 aa8.27□□□□□ -1.09
LINC00871-201ENST00000555246 LRRIQ1Q96JM4 1722 aa8.27□□□□□ -1.09
LINC00871-201ENST00000555246 UBTFP17480 764 aaKnown RBP8.27□□□□□ -1.09
LINC00871-201ENST00000555246 RANGAP1P46060 587 aaPredicted RBP8.27□□□□□ -1.09
LINC00871-201ENST00000555246 EFCAB2Q5VUJ9 269 aa8.27□□□□□ -1.09
LINC00871-201ENST00000555246 PREX2Q70Z35 1606 aa8.27□□□□□ -1.09
LINC00871-201ENST00000555246 ABCC1P33527 1531 aa8.27□□□□□ -1.09
LINC00871-201ENST00000555246 AGLP35573 1532 aa8.26□□□□□ -1.09
LINC00871-201ENST00000555246 ARHGAP5Q13017 1502 aa8.26□□□□□ -1.09
LINC00871-201ENST00000555246 DSG3P32926 999 aa8.26□□□□□ -1.09
LINC00871-201ENST00000555246 APLP2Q06481 763 aa8.26□□□□□ -1.09
LINC00871-201ENST00000555246 DIP2CQ9Y2E4 1556 aa8.26□□□□□ -1.09
LINC00871-201ENST00000555246 ARID4BQ4LE39 1312 aaPredicted RBP8.25□□□□□ -1.09
LINC00871-201ENST00000555246 FER1L4A9Z1Z3 1794 aa8.25□□□□□ -1.09
LINC00871-201ENST00000555246 CDC42BPBQ9Y5S2 1711 aa8.24□□□□□ -1.09
LINC00871-201ENST00000555246 ABCA6Q8N139 1617 aa8.23□□□□□ -1.09
LINC00871-201ENST00000555246 ITSN2Q9NZM3 1697 aa8.22□□□□□ -1.09
LINC00871-201ENST00000555246 SPDYE4A6NLX3 237 aa8.22□□□□□ -1.09
LINC00871-201ENST00000555246 MKRN4PQ13434 485 aaPredicted RBP8.22□□□□□ -1.09
LINC00871-201ENST00000555246 FBXO41Q8TF61 875 aa8.22□□□□□ -1.09
LINC00871-201ENST00000555246 PREX1Q8TCU6 1659 aa8.21□□□□□ -1.09
LINC00871-201ENST00000555246 KIAA1107Q9UPP5 1409 aa8.2□□□□□ -1.1
LINC00871-201ENST00000555246 TRAPPC8Q9Y2L5 1435 aa8.2□□□□□ -1.1
LINC00871-201ENST00000555246 CDC42BPAQ5VT25 1732 aa8.2□□□□□ -1.1
LINC00871-201ENST00000555246 FBXO3Q9UK99 471 aa8.2□□□□□ -1.1
LINC00871-201ENST00000555246 KIDINS220Q9ULH0 1771 aa8.2□□□□□ -1.1
LINC00871-201ENST00000555246 GPATCH8Q9UKJ3 1502 aaKnown RBP8.19□□□□□ -1.1
LINC00871-201ENST00000555246 PLXNC1O60486 1568 aa8.19□□□□□ -1.1
LINC00871-201ENST00000555246 SAMD9LQ8IVG5 1584 aa8.19□□□□□ -1.1
LINC00871-201ENST00000555246 AFAP1Q8N556 730 aa8.19□□□□□ -1.1
LINC00871-201ENST00000555246 CNTLNQ9NXG0 1405 aa8.19□□□□□ -1.1
LINC00871-201ENST00000555246 PLEKHH2Q8IVE3 1493 aa8.19□□□□□ -1.1
LINC00871-201ENST00000555246 INO80Q9ULG1 1556 aaPredicted RBP8.18□□□□□ -1.1
LINC00871-201ENST00000555246 SYCP2Q9BX26 1530 aa8.18□□□□□ -1.1
LINC00871-201ENST00000555246 PROM2Q8N271 834 aa8.17□□□□□ -1.1
LINC00871-201ENST00000555246 ATP1B4Q9UN42 357 aaPredicted RBP8.17□□□□□ -1.1
LINC00871-201ENST00000555246 NPATQ14207 1427 aa8.17□□□□□ -1.1
LINC00871-201ENST00000555246 UHRF1BP1Q6BDS2 1440 aa8.17□□□□□ -1.1
LINC00871-201ENST00000555246 MROH2AA6NES4 1674 aa8.17□□□□□ -1.1
LINC00871-201ENST00000555246 HSPA2P54652 639 aa8.16□□□□□ -1.1
LINC00871-201ENST00000555246 ATP7AQ04656 1500 aa8.16□□□□□ -1.1
LINC00871-201ENST00000555246 EHBP1L1Q8N3D4 1523 aa8.16□□□□□ -1.1
LINC00871-201ENST00000555246 C3P01024 1663 aa8.15□□□□□ -1.1
LINC00871-201ENST00000555246 CEP162Q5TB80 1403 aa8.15□□□□□ -1.1
LINC00871-201ENST00000555246 MBD5Q9P267 1494 aa8.14□□□□□ -1.11
LINC00871-201ENST00000555246 PTPRTO14522 1441 aa8.14□□□□□ -1.11
LINC00871-201ENST00000555246 MLECQ14165 292 aa8.14□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms