RNA–Protein interactions for RNA: ENST00000555169.1

LGMN-210, Transcript of legumain, humanhuman

TSL 2

Gene LGMN, Length 543 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LGMN-210ENST00000555169 MYOM3Q5VTT5 1437 aa25.9■■□□□ 1.74
LGMN-210ENST00000555169 GPATCH8Q9UKJ3 1502 aaKnown RBP25.9■■□□□ 1.74
LGMN-210ENST00000555169 FANCAO15360 1455 aa25.9■■□□□ 1.74
LGMN-210ENST00000555169 NEO1Q92859 1461 aa25.88■■□□□ 1.73
LGMN-210ENST00000555169 PPARGC1BQ86YN6 1023 aaKnown RBP25.88■■□□□ 1.73
LGMN-210ENST00000555169 EFCAB2Q5VUJ9 269 aa25.84■■□□□ 1.73
LGMN-210ENST00000555169 CFDP1Q9UEE9 299 aaPredicted RBP25.84■■□□□ 1.73
LGMN-210ENST00000555169 MIA2Q96PC5 1412 aa25.83■■□□□ 1.73
LGMN-210ENST00000555169 PHLDB1Q86UU1 1377 aa25.82■■□□□ 1.72
LGMN-210ENST00000555169 PLEKHH2Q8IVE3 1493 aa25.82■■□□□ 1.72
LGMN-210ENST00000555169 PTPN23Q9H3S7 1636 aa25.81■■□□□ 1.72
LGMN-210ENST00000555169 SAMD9LQ8IVG5 1584 aa25.8■■□□□ 1.72
LGMN-210ENST00000555169 FGD6Q6ZV73 1430 aa25.79■■□□□ 1.72
LGMN-210ENST00000555169 ADGRL1O94910 1474 aa25.79■■□□□ 1.72
LGMN-210ENST00000555169 ABCC1P33527 1531 aa25.78■■□□□ 1.72
LGMN-210ENST00000555169 ZNF777Q9ULD5 760 aaPredicted RBP25.78■■□□□ 1.72
LGMN-210ENST00000555169 AKNAQ7Z591 1439 aa25.78■■□□□ 1.72
LGMN-210ENST00000555169 CAMSAP2Q08AD1 1489 aa25.78■■□□□ 1.72
LGMN-210ENST00000555169 KDM6BO15054 1643 aa25.77■■□□□ 1.72
LGMN-210ENST00000555169 SYCP2Q9BX26 1530 aa25.73■■□□□ 1.71
LGMN-210ENST00000555169 TCOF1Q13428 1488 aaKnown RBP25.7■■□□□ 1.7
LGMN-210ENST00000555169 DENND4BO75064 1496 aaPredicted RBP25.69■■□□□ 1.7
LGMN-210ENST00000555169 SCAPERQ9BY12 1400 aa25.68■■□□□ 1.7
LGMN-210ENST00000555169 KIAA1107Q9UPP5 1409 aa25.68■■□□□ 1.7
LGMN-210ENST00000555169 RICTORQ6R327 1708 aa25.67■■□□□ 1.7
LGMN-210ENST00000555169 ZNF518AQ6AHZ1 1483 aa25.66■■□□□ 1.7
LGMN-210ENST00000555169 ARHGEF5Q12774 1597 aa25.66■■□□□ 1.7
LGMN-210ENST00000555169 CROCC2H7BZ55 1655 aa25.64■■□□□ 1.7
LGMN-210ENST00000555169 POGZQ7Z3K3 1410 aa25.64■■□□□ 1.7
LGMN-210ENST00000555169 RRBP1Q9P2E9 1410 aaKnown RBP25.64■■□□□ 1.7
LGMN-210ENST00000555169 FAM50AQ14320 339 aaKnown RBP25.64■■□□□ 1.7
LGMN-210ENST00000555169 DNMT1P26358 1616 aaKnown RBP25.63■■□□□ 1.69
LGMN-210ENST00000555169 CCDC141Q6ZP82 1450 aa25.63■■□□□ 1.69
LGMN-210ENST00000555169 ZNF644Q9H582 1327 aaPredicted RBP25.6■■□□□ 1.69
LGMN-210ENST00000555169 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP25.59■■□□□ 1.69
LGMN-210ENST00000555169 RSPH4AQ5TD94 716 aa25.59■■□□□ 1.69
LGMN-210ENST00000555169 FRMPD1Q5SYB0 1578 aa25.59■■□□□ 1.69
LGMN-210ENST00000555169 HECW2Q9P2P5 1572 aa25.59■■□□□ 1.69
LGMN-210ENST00000555169 KDM5CP41229 1560 aa25.58■■□□□ 1.69
LGMN-210ENST00000555169 ZMYM4Q5VZL5 1548 aa25.58■■□□□ 1.68
LGMN-210ENST00000555169 ARHGEF12Q9NZN5 1544 aa25.58■■□□□ 1.68
LGMN-210ENST00000555169 ADGBQ8N7X0 1667 aa25.55■■□□□ 1.68
LGMN-210ENST00000555169 MBD5Q9P267 1494 aa25.55■■□□□ 1.68
LGMN-210ENST00000555169 HNRNPMP52272 730 aaKnown RBP eCLIP25.55■■□□□ 1.68
LGMN-210ENST00000555169 SHANK2Q9UPX8 1470 aa25.54■■□□□ 1.68
LGMN-210ENST00000555169 MYT1LQ9UL68 1186 aa25.54■■□□□ 1.68
LGMN-210ENST00000555169 DAPK1P53355 1430 aa25.54■■□□□ 1.68
LGMN-210ENST00000555169 TRAPPC8Q9Y2L5 1435 aa25.54■■□□□ 1.68
LGMN-210ENST00000555169 MAST1Q9Y2H9 1570 aa25.52■■□□□ 1.68
LGMN-210ENST00000555169 TSPY4P0CV99 314 aa25.52■■□□□ 1.68
LGMN-210ENST00000555169 TSPY10P0CW01 314 aa25.52■■□□□ 1.68
LGMN-210ENST00000555169 ATP7AQ04656 1500 aa25.52■■□□□ 1.68
LGMN-210ENST00000555169 INO80Q9ULG1 1556 aaPredicted RBP25.52■■□□□ 1.68
LGMN-210ENST00000555169 RAPGEF3O95398 923 aa25.5■■□□□ 1.67
LGMN-210ENST00000555169 ZFYVE16Q7Z3T8 1539 aa25.5■■□□□ 1.67
LGMN-210ENST00000555169 MAGI2Q86UL8 1455 aa25.5■■□□□ 1.67
LGMN-210ENST00000555169 COL17A1Q9UMD9 1497 aaPredicted RBP25.49■■□□□ 1.67
LGMN-210ENST00000555169 SPAG9O60271 1321 aaKnown RBP25.49■■□□□ 1.67
LGMN-210ENST00000555169 C9orf84Q5VXU9 1444 aa25.48■■□□□ 1.67
LGMN-210ENST00000555169 ARHGEF40Q8TER5 1519 aa25.47■■□□□ 1.67
LGMN-210ENST00000555169 MLH3Q9UHC1 1453 aa25.47■■□□□ 1.67
LGMN-210ENST00000555169 KIDINS220Q9ULH0 1771 aa25.46■■□□□ 1.67
LGMN-210ENST00000555169 AFAP1Q8N556 730 aa25.46■■□□□ 1.67
LGMN-210ENST00000555169 ABCC5O15440 1437 aa25.46■■□□□ 1.67
LGMN-210ENST00000555169 PLXNC1O60486 1568 aa25.45■■□□□ 1.66
LGMN-210ENST00000555169 RTEL1-TNFRSF6BF6WH68 1400 aa25.44■■□□□ 1.66
LGMN-210ENST00000555169 ITGAEP38570 1179 aa25.43■■□□□ 1.66
LGMN-210ENST00000555169 ABCA6Q8N139 1617 aa25.42■■□□□ 1.66
LGMN-210ENST00000555169 DIP2CQ9Y2E4 1556 aa25.4■■□□□ 1.66
LGMN-210ENST00000555169 ANKRD30AQ9BXX3 1397 aa25.39■■□□□ 1.65
LGMN-210ENST00000555169 ADGRL2O95490 1459 aa25.38■■□□□ 1.65
LGMN-210ENST00000555169 GCC2Q8IWJ2 1684 aa25.33■■□□□ 1.65
LGMN-210ENST00000555169 REREQ9P2R6 1566 aa25.33■■□□□ 1.65
LGMN-210ENST00000555169 CHIC2Q9UKJ5 165 aa25.33■■□□□ 1.65
LGMN-210ENST00000555169 YEATS2Q9ULM3 1422 aa25.33■■□□□ 1.65
LGMN-210ENST00000555169 ROCK1Q13464 1354 aa25.32■■□□□ 1.64
LGMN-210ENST00000555169 TRIM26Q12899 539 aaPredicted RBP25.32■■□□□ 1.64
LGMN-210ENST00000555169 ATP10AO60312 1499 aa25.32■■□□□ 1.64
LGMN-210ENST00000555169 DUOX2Q9NRD8 1548 aa25.32■■□□□ 1.64
LGMN-210ENST00000555169 KIF15Q9NS87 1388 aa25.31■■□□□ 1.64
LGMN-210ENST00000555169 A2MP01023 1474 aa25.3■■□□□ 1.64
LGMN-210ENST00000555169 EIF2AK4Q9P2K8 1649 aaKnown RBP25.29■■□□□ 1.64
LGMN-210ENST00000555169 PTPRKQ15262 1439 aa25.28■■□□□ 1.64
LGMN-210ENST00000555169 NCOA1Q15788 1441 aa25.28■■□□□ 1.64
LGMN-210ENST00000555169 ERBINQ96RT1 1412 aa25.25■■□□□ 1.63
LGMN-210ENST00000555169 RRP7BPQ9NSQ0 103 aa25.24■■□□□ 1.63
LGMN-210ENST00000555169 BCORL1Q5H9F3 1711 aa25.21■■□□□ 1.63
LGMN-210ENST00000555169 AGLP35573 1532 aa25.21■■□□□ 1.63
LGMN-210ENST00000555169 HFM1A2PYH4 1435 aa25.2■■□□□ 1.63
LGMN-210ENST00000555169 DHX29Q7Z478 1369 aaKnown RBP25.2■■□□□ 1.63
LGMN-210ENST00000555169 ARID4BQ4LE39 1312 aaPredicted RBP25.18■■□□□ 1.62
LGMN-210ENST00000555169 ANKRD50Q9ULJ7 1429 aa25.18■■□□□ 1.62
LGMN-210ENST00000555169 RNF17Q9BXT8 1623 aaKnown RBP25.15■■□□□ 1.62
LGMN-210ENST00000555169 NAIPQ13075 1403 aa25.14■■□□□ 1.62
LGMN-210ENST00000555169 SIGLEC1Q9BZZ2 1709 aa25.14■■□□□ 1.61
LGMN-210ENST00000555169 DEPDC5O75140 1603 aa25.11■■□□□ 1.61
LGMN-210ENST00000555169 UNC13BO14795 1591 aa25.1■■□□□ 1.61
LGMN-210ENST00000555169 KIF3BO15066 747 aa25.09■■□□□ 1.61
LGMN-210ENST00000555169 ZC3H13Q5T200 1668 aaKnown RBP25.09■■□□□ 1.61
LGMN-210ENST00000555169 SETD5Q9C0A6 1442 aa25.09■■□□□ 1.61
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms