RNA–Protein interactions for RNA: ENST00000554005.1

FOXN3-206, Transcript of forkhead box N3, humanhuman

TSL 5

Gene FOXN3, Length 450 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-206ENST00000554005 BOLA1Q9Y3E2 137 aa11.97□□□□□ -0.49
FOXN3-206ENST00000554005 TMEM121BQ9BXQ6 578 aaPredicted RBP11.96□□□□□ -0.49
FOXN3-206ENST00000554005 SEC24BO95487 1268 aa11.95□□□□□ -0.5
FOXN3-206ENST00000554005 GPHNQ9NQX3 736 aaPredicted RBP11.94□□□□□ -0.5
FOXN3-206ENST00000554005 POTEFA5A3E0 1075 aa11.93□□□□□ -0.5
FOXN3-206ENST00000554005 C7P10643 843 aa11.93□□□□□ -0.5
FOXN3-206ENST00000554005 PRKCSHP14314 528 aaPredicted RBP11.92□□□□□ -0.5
FOXN3-206ENST00000554005 ARHGEF1Q92888 912 aaKnown RBP11.92□□□□□ -0.5
FOXN3-206ENST00000554005 G3V3G9 751 aa11.91□□□□□ -0.5
FOXN3-206ENST00000554005 L3MBTL3Q96JM7 780 aaPredicted RBP11.91□□□□□ -0.5
FOXN3-206ENST00000554005 METRNQ9UJH8 293 aa11.91□□□□□ -0.5
FOXN3-206ENST00000554005 PPP1R15BQ5SWA1 713 aa11.9□□□□□ -0.5
FOXN3-206ENST00000554005 CAMK2BQ13554 666 aa11.89□□□□□ -0.51
FOXN3-206ENST00000554005 TPRNQ4KMQ1 711 aa11.89□□□□□ -0.51
FOXN3-206ENST00000554005 TMC2Q8TDI7 906 aa11.88□□□□□ -0.51
FOXN3-206ENST00000554005 DSG2Q14126 1118 aa11.87□□□□□ -0.51
FOXN3-206ENST00000554005 KIF3CO14782 793 aa11.85□□□□□ -0.51
FOXN3-206ENST00000554005 C2orf72A6NCS6 295 aa11.84□□□□□ -0.51
FOXN3-206ENST00000554005 FOXK1P85037 733 aa11.84□□□□□ -0.51
FOXN3-206ENST00000554005 ARIH1Q9Y4X5 557 aaPredicted RBP11.84□□□□□ -0.51
FOXN3-206ENST00000554005 TMEM92Q6UXU6 159 aa11.82□□□□□ -0.52
FOXN3-206ENST00000554005 PLPP6Q8IY26 295 aa11.79□□□□□ -0.52
FOXN3-206ENST00000554005 EMILIN3Q9NT22 766 aa11.79□□□□□ -0.52
FOXN3-206ENST00000554005 SEMA3EO15041 775 aa11.78□□□□□ -0.52
FOXN3-206ENST00000554005 TESPA1A2RU30 521 aaPredicted RBP11.76□□□□□ -0.53
FOXN3-206ENST00000554005 C3orf67Q6ZVT6 689 aa11.75□□□□□ -0.53
FOXN3-206ENST00000554005 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.74□□□□□ -0.53
FOXN3-206ENST00000554005 DPYSL4O14531 572 aa11.73□□□□□ -0.53
FOXN3-206ENST00000554005 LMOD2Q6P5Q4 547 aa11.73□□□□□ -0.53
FOXN3-206ENST00000554005 TULP1O00294 542 aaPredicted RBP11.7□□□□□ -0.54
FOXN3-206ENST00000554005 PDIA6Q15084 440 aa11.68□□□□□ -0.54
FOXN3-206ENST00000554005 SPDYE16A6NNV3 312 aaPredicted RBP11.66□□□□□ -0.54
FOXN3-206ENST00000554005 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.66□□□□□ -0.54
FOXN3-206ENST00000554005 OXER1Q8TDS5 423 aa11.65□□□□□ -0.54
FOXN3-206ENST00000554005 UPF1Q92900 1129 aaKnown RBP eCLIP11.65□□□□□ -0.54
FOXN3-206ENST00000554005 MLLT3P42568 568 aaPredicted RBP11.64□□□□□ -0.55
FOXN3-206ENST00000554005 SMYD5Q6GMV2 418 aa11.64□□□□□ -0.55
FOXN3-206ENST00000554005 POTEJP0CG39 1038 aa11.62□□□□□ -0.55
FOXN3-206ENST00000554005 MAP3K9P80192 1104 aa11.62□□□□□ -0.55
FOXN3-206ENST00000554005 POTEB2H3BUK9 544 aa11.6□□□□□ -0.55
FOXN3-206ENST00000554005 PTCD2Q8WV60 388 aaKnown RBP11.57□□□□□ -0.56
FOXN3-206ENST00000554005 SLC34A2O95436 690 aa11.56□□□□□ -0.56
FOXN3-206ENST00000554005 ZC3H15Q8WU90 426 aaKnown RBP11.56□□□□□ -0.56
FOXN3-206ENST00000554005 RBM26Q5T8P6 1007 aaKnown RBP11.55□□□□□ -0.56
FOXN3-206ENST00000554005 TBC1D12O60347 775 aa11.53□□□□□ -0.56
FOXN3-206ENST00000554005 EVI5O60447 810 aa11.52□□□□□ -0.57
FOXN3-206ENST00000554005 GRXCR2A6NFK2 248 aa11.5□□□□□ -0.57
FOXN3-206ENST00000554005 PTGER2P43116 358 aa11.5□□□□□ -0.57
FOXN3-206ENST00000554005 SCUBE2Q9NQ36 999 aa11.49□□□□□ -0.57
FOXN3-206ENST00000554005 MAMSTRQ6ZN01 415 aa11.48□□□□□ -0.57
FOXN3-206ENST00000554005 GPIHBP1Q8IV16 184 aa11.48□□□□□ -0.57
FOXN3-206ENST00000554005 SLAIN1Q8ND83 568 aa11.48□□□□□ -0.57
FOXN3-206ENST00000554005 DDX12PQ92771 950 aa11.48□□□□□ -0.57
FOXN3-206ENST00000554005 PCDHGA4Q9Y5G9 962 aa11.48□□□□□ -0.57
FOXN3-206ENST00000554005 ZNF316A6NFI3 1004 aaPredicted RBP11.47□□□□□ -0.57
FOXN3-206ENST00000554005 ZMYND10O75800 440 aa11.46□□□□□ -0.57
FOXN3-206ENST00000554005 OSBPP22059 807 aa11.46□□□□□ -0.57
FOXN3-206ENST00000554005 ANO8Q9HCE9 1232 aaPredicted RBP11.46□□□□□ -0.57
FOXN3-206ENST00000554005 HOXB3P14651 431 aaPredicted RBP11.44□□□□□ -0.58
FOXN3-206ENST00000554005 KDM4FA0A1W2PPD8 638 aa11.41□□□□□ -0.58
FOXN3-206ENST00000554005 GPR37O15354 613 aa11.41□□□□□ -0.58
FOXN3-206ENST00000554005 PRIM1P49642 420 aaKnown RBP11.41□□□□□ -0.58
FOXN3-206ENST00000554005 DOK7Q18PE1 504 aa11.41□□□□□ -0.58
FOXN3-206ENST00000554005 BARGINQ6ZT62 677 aa11.41□□□□□ -0.58
FOXN3-206ENST00000554005 SLC24A3Q9HC58 644 aa11.4□□□□□ -0.58
FOXN3-206ENST00000554005 NUTM2FA1L443 756 aa11.38□□□□□ -0.59
FOXN3-206ENST00000554005 PHF14O94880 888 aa11.37□□□□□ -0.59
FOXN3-206ENST00000554005 RIMBP2O15034 1052 aa11.36□□□□□ -0.59
FOXN3-206ENST00000554005 ARSIQ5FYB1 569 aa11.36□□□□□ -0.59
FOXN3-206ENST00000554005 KHSRPQ92945 711 aaKnown RBP eCLIP11.36□□□□□ -0.595e-7■■■■□ 21.2
FOXN3-206ENST00000554005 ZSWIM6Q9HCJ5 1215 aa11.36□□□□□ -0.59
FOXN3-206ENST00000554005 PCDHGA10Q9Y5H3 936 aa11.35□□□□□ -0.59
FOXN3-206ENST00000554005 NUDT7P0C024 238 aa11.34□□□□□ -0.59
FOXN3-206ENST00000554005 GPR153Q6NV75 609 aa11.34□□□□□ -0.59
FOXN3-206ENST00000554005 EPAS1Q99814 870 aa11.34□□□□□ -0.59
FOXN3-206ENST00000554005 EN1Q05925 392 aaPredicted RBP11.33□□□□□ -0.6
FOXN3-206ENST00000554005 OTUD5Q96G74 571 aa11.33□□□□□ -0.6
FOXN3-206ENST00000554005 ZNF710Q8N1W2 664 aa11.32□□□□□ -0.6
FOXN3-206ENST00000554005 JPH4Q96JJ6 628 aa11.32□□□□□ -0.6
FOXN3-206ENST00000554005 TYW1BQ6NUM6 668 aa11.31□□□□□ -0.6
FOXN3-206ENST00000554005 FCHSD2O94868 740 aa11.3□□□□□ -0.6
FOXN3-206ENST00000554005 FOSBP53539 338 aa11.3□□□□□ -0.6
FOXN3-206ENST00000554005 KRI1Q8N9T8 703 aaKnown RBP11.3□□□□□ -0.6
FOXN3-206ENST00000554005 MAP3K7O43318 606 aa11.29□□□□□ -0.6
FOXN3-206ENST00000554005 PTGDRQ13258 359 aa11.29□□□□□ -0.6
FOXN3-206ENST00000554005 RBM33Q96EV2 1170 aaKnown RBP11.29□□□□□ -0.6
FOXN3-206ENST00000554005 CDHR5Q9HBB8 845 aa11.29□□□□□ -0.6
FOXN3-206ENST00000554005 SNPHO15079 494 aa11.28□□□□□ -0.6
FOXN3-206ENST00000554005 GNPATO15228 680 aa11.28□□□□□ -0.6
FOXN3-206ENST00000554005 BRPF1P55201 1214 aaPredicted RBP11.28□□□□□ -0.6
FOXN3-206ENST00000554005 HIC1Q14526 733 aa11.28□□□□□ -0.6
FOXN3-206ENST00000554005 FBXW7Q969H0 707 aa11.28□□□□□ -0.6
FOXN3-206ENST00000554005 AK7Q96M32 723 aa11.28□□□□□ -0.6
FOXN3-206ENST00000554005 LHX8Q68G74 356 aa11.27□□□□□ -0.61
FOXN3-206ENST00000554005 ZNF454Q8N9F8 522 aa11.27□□□□□ -0.61
FOXN3-206ENST00000554005 TSR1Q2NL82 804 aaKnown RBP11.26□□□□□ -0.61
FOXN3-206ENST00000554005 FECHP22830 423 aa11.25□□□□□ -0.61
FOXN3-206ENST00000554005 MAP2K5Q13163 448 aa11.25□□□□□ -0.61
FOXN3-206ENST00000554005 NPDC1Q9NQX5 325 aaPredicted RBP11.25□□□□□ -0.61
FOXN3-206ENST00000554005 LHX6Q9UPM6 363 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms