RNA–Protein interactions for RNA: ENST00000553699.5

GSKIP-202, Transcript of GSK3B interacting protein, humanhuman

TSL 4

Gene GSKIP, Length 501 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GSKIP-202ENST00000553699 LTBP4Q8N2S1 1624 aa15.65■□□□□ 0.1
GSKIP-202ENST00000553699 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP15.63■□□□□ 0.09
GSKIP-202ENST00000553699 CFAP74Q9C0B2 1584 aa15.62■□□□□ 0.09
GSKIP-202ENST00000553699 STRCQ7RTU9 1775 aa15.62■□□□□ 0.09
GSKIP-202ENST00000553699 TTC37Q6PGP7 1564 aa15.62■□□□□ 0.09
GSKIP-202ENST00000553699 ATP1B4Q9UN42 357 aaPredicted RBP15.61■□□□□ 0.09
GSKIP-202ENST00000553699 POGZQ7Z3K3 1410 aa15.6■□□□□ 0.09
GSKIP-202ENST00000553699 HSPA1LP34931 641 aa15.59■□□□□ 0.09
GSKIP-202ENST00000553699 CDK11AQ9UQ88 783 aaPredicted RBP15.58■□□□□ 0.08
GSKIP-202ENST00000553699 CLIP1P30622 1438 aa15.58■□□□□ 0.08
GSKIP-202ENST00000553699 FANCAO15360 1455 aa15.58■□□□□ 0.08
GSKIP-202ENST00000553699 KIF14Q15058 1648 aa15.57■□□□□ 0.08
GSKIP-202ENST00000553699 CASKIN1Q8WXD9 1431 aa15.57■□□□□ 0.08
GSKIP-202ENST00000553699 CCDC18Q5T9S5 1454 aa15.57■□□□□ 0.08
GSKIP-202ENST00000553699 LRRIQ1Q96JM4 1722 aa15.57■□□□□ 0.08
GSKIP-202ENST00000553699 FRMPD1Q5SYB0 1578 aa15.56■□□□□ 0.08
GSKIP-202ENST00000553699 FYCO1Q9BQS8 1478 aa15.55■□□□□ 0.08
GSKIP-202ENST00000553699 TROQ12816 1431 aaPredicted RBP15.55■□□□□ 0.08
GSKIP-202ENST00000553699 AKNAQ7Z591 1439 aa15.53■□□□□ 0.08
GSKIP-202ENST00000553699 MYO5CQ9NQX4 1742 aa15.53■□□□□ 0.08
GSKIP-202ENST00000553699 DENND4BO75064 1496 aaPredicted RBP15.52■□□□□ 0.08
GSKIP-202ENST00000553699 PLCH2O75038 1416 aa15.52■□□□□ 0.08
GSKIP-202ENST00000553699 RICTORQ6R327 1708 aa15.52■□□□□ 0.08
GSKIP-202ENST00000553699 PREX1Q8TCU6 1659 aa15.52■□□□□ 0.08
GSKIP-202ENST00000553699 MLECQ14165 292 aa15.51■□□□□ 0.07
GSKIP-202ENST00000553699 UHRF1BP1Q6BDS2 1440 aa15.5■□□□□ 0.07
GSKIP-202ENST00000553699 SCAF1Q9H7N4 1312 aaKnown RBP15.49■□□□□ 0.07
GSKIP-202ENST00000553699 ARHGEF40Q8TER5 1519 aa15.49■□□□□ 0.07
GSKIP-202ENST00000553699 ZMYM4Q5VZL5 1548 aa15.48■□□□□ 0.07
GSKIP-202ENST00000553699 CEBPAP49715 358 aaPredicted RBP15.48■□□□□ 0.07
GSKIP-202ENST00000553699 ARHGAP5Q13017 1502 aa15.46■□□□□ 0.07
GSKIP-202ENST00000553699 CEP162Q5TB80 1403 aa15.45■□□□□ 0.06
GSKIP-202ENST00000553699 PIP4K2BP78356 416 aa15.45■□□□□ 0.06
GSKIP-202ENST00000553699 SCAPERQ9BY12 1400 aa15.44■□□□□ 0.06
GSKIP-202ENST00000553699 PREX2Q70Z35 1606 aa15.44■□□□□ 0.06
GSKIP-202ENST00000553699 EFCAB2Q5VUJ9 269 aa15.44■□□□□ 0.06
GSKIP-202ENST00000553699 MAGI2Q86UL8 1455 aa15.44■□□□□ 0.06
GSKIP-202ENST00000553699 ZFYVE16Q7Z3T8 1539 aa15.43■□□□□ 0.06
GSKIP-202ENST00000553699 TOM1O60784 492 aa15.42■□□□□ 0.06
GSKIP-202ENST00000553699 ZNF335Q9H4Z2 1342 aaPredicted RBP15.42■□□□□ 0.06
GSKIP-202ENST00000553699 RGS17Q9UGC6 210 aaPredicted RBP15.41■□□□□ 0.06
GSKIP-202ENST00000553699 ZNF518AQ6AHZ1 1483 aa15.4■□□□□ 0.06
GSKIP-202ENST00000553699 CDC42BPBQ9Y5S2 1711 aa15.4■□□□□ 0.06
GSKIP-202ENST00000553699 SETD1BQ9UPS6 1966 aaKnown RBP15.4■□□□□ 0.06
GSKIP-202ENST00000553699 FER1L4A9Z1Z3 1794 aa15.39■□□□□ 0.05
GSKIP-202ENST00000553699 ABCC1P33527 1531 aa15.38■□□□□ 0.05
GSKIP-202ENST00000553699 CDC42BPAQ5VT25 1732 aa15.37■□□□□ 0.05
GSKIP-202ENST00000553699 KDM5CP41229 1560 aa15.37■□□□□ 0.05
GSKIP-202ENST00000553699 MTUS2Q5JR59 1369 aa15.36■□□□□ 0.05
GSKIP-202ENST00000553699 NCOA1Q15788 1441 aa15.35■□□□□ 0.05
GSKIP-202ENST00000553699 EHBP1L1Q8N3D4 1523 aa15.35■□□□□ 0.05
GSKIP-202ENST00000553699 ITSN2Q9NZM3 1697 aa15.35■□□□□ 0.05
GSKIP-202ENST00000553699 C9orf84Q5VXU9 1444 aa15.33■□□□□ 0.04
GSKIP-202ENST00000553699 ATP10AO60312 1499 aa15.33■□□□□ 0.04
GSKIP-202ENST00000553699 ARHGEF12Q9NZN5 1544 aa15.33■□□□□ 0.04
GSKIP-202ENST00000553699 GPATCH8Q9UKJ3 1502 aaKnown RBP15.33■□□□□ 0.04
GSKIP-202ENST00000553699 SIGLEC1Q9BZZ2 1709 aa15.32■□□□□ 0.04
GSKIP-202ENST00000553699 SAMD9LQ8IVG5 1584 aa15.31■□□□□ 0.04
GSKIP-202ENST00000553699 LOC105371045A0A1W2PR82 267 aa15.3■□□□□ 0.04
GSKIP-202ENST00000553699 CCNB3Q8WWL7 1395 aa15.3■□□□□ 0.04
GSKIP-202ENST00000553699 MLH3Q9UHC1 1453 aa15.3■□□□□ 0.04
GSKIP-202ENST00000553699 DIP2CQ9Y2E4 1556 aa15.29■□□□□ 0.04
GSKIP-202ENST00000553699 VPS8Q8N3P4 1428 aa15.29■□□□□ 0.04
GSKIP-202ENST00000553699 TRAPPC8Q9Y2L5 1435 aa15.29■□□□□ 0.04
GSKIP-202ENST00000553699 AFAP1Q8N556 730 aa15.29■□□□□ 0.04
GSKIP-202ENST00000553699 TIAM1Q13009 1591 aa15.28■□□□□ 0.04
GSKIP-202ENST00000553699 REREQ9P2R6 1566 aa15.28■□□□□ 0.04
GSKIP-202ENST00000553699 SYCP2Q9BX26 1530 aa15.28■□□□□ 0.04
GSKIP-202ENST00000553699 ABCA6Q8N139 1617 aa15.28■□□□□ 0.04
GSKIP-202ENST00000553699 PLEKHH2Q8IVE3 1493 aa15.27■□□□□ 0.04
GSKIP-202ENST00000553699 NCKAP5LQ9HCH0 1330 aa15.27■□□□□ 0.04
GSKIP-202ENST00000553699 POTEAQ6S8J7 498 aa15.27■□□□□ 0.04
GSKIP-202ENST00000553699 MYT1LQ9UL68 1186 aa15.27■□□□□ 0.04
GSKIP-202ENST00000553699 CFDP1Q9UEE9 299 aaPredicted RBP15.26■□□□□ 0.03
GSKIP-202ENST00000553699 ZNF777Q9ULD5 760 aaPredicted RBP15.26■□□□□ 0.03
GSKIP-202ENST00000553699 SUPT6HQ7KZ85 1726 aaKnown RBP15.25■□□□□ 0.03
GSKIP-202ENST00000553699 KIAA1107Q9UPP5 1409 aa15.25■□□□□ 0.03
GSKIP-202ENST00000553699 KIDINS220Q9ULH0 1771 aa15.24■□□□□ 0.03
GSKIP-202ENST00000553699 PKD2Q13563 968 aa15.23■□□□□ 0.03
GSKIP-202ENST00000553699 AGLP35573 1532 aa15.22■□□□□ 0.03
GSKIP-202ENST00000553699 NCOA2Q15596 1464 aa15.21■□□□□ 0.03
GSKIP-202ENST00000553699 INO80Q9ULG1 1556 aaPredicted RBP15.21■□□□□ 0.03
GSKIP-202ENST00000553699 UPF1Q92900 1129 aaKnown RBP eCLIP15.2■□□□□ 0.02
GSKIP-202ENST00000553699 ATP7AQ04656 1500 aa15.2■□□□□ 0.02
GSKIP-202ENST00000553699 MAP3K1Q13233 1512 aa15.2■□□□□ 0.02
GSKIP-202ENST00000553699 SRCAPQ6ZRS2 3230 aa15.2■□□□□ 0.02
GSKIP-202ENST00000553699 LRRC9Q6ZRR7 1453 aa15.2■□□□□ 0.02
GSKIP-202ENST00000553699 CAMSAP1Q5T5Y3 1602 aa15.19■□□□□ 0.02
GSKIP-202ENST00000553699 HNRNPMP52272 730 aaKnown RBP eCLIP15.19■□□□□ 0.028e-7■■■■□ 26.4
GSKIP-202ENST00000553699 SPAG9O60271 1321 aaKnown RBP15.18■□□□□ 0.02
GSKIP-202ENST00000553699 PTPRKQ15262 1439 aa15.18■□□□□ 0.02
GSKIP-202ENST00000553699 SENP3Q9H4L4 574 aaPredicted RBP15.18■□□□□ 0.02
GSKIP-202ENST00000553699 ESF1Q9H501 851 aaKnown RBP15.17■□□□□ 0.02
GSKIP-202ENST00000553699 PPP6R1Q9UPN7 881 aa15.17■□□□□ 0.02
GSKIP-202ENST00000553699 CAMSAP2Q08AD1 1489 aa15.15■□□□□ 0.02
GSKIP-202ENST00000553699 MBD5Q9P267 1494 aa15.15■□□□□ 0.02
GSKIP-202ENST00000553699 PLXNC1O60486 1568 aa15.15■□□□□ 0.02
GSKIP-202ENST00000553699 ZNF644Q9H582 1327 aaPredicted RBP15.15■□□□□ 0.02
GSKIP-202ENST00000553699 ADGBQ8N7X0 1667 aa15.13■□□□□ 0.01
GSKIP-202ENST00000553699 A2MP01023 1474 aa15.13■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms