RNA–Protein interactions for RNA: ENST00000553699.5

GSKIP-202, Transcript of GSK3B interacting protein, humanhuman

TSL 4

Gene GSKIP, Length 501 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GSKIP-202ENST00000553699 NISCHQ9Y2I1 1504 aa23.68■■□□□ 1.38
GSKIP-202ENST00000553699 ABCC9O60706 1549 aa21.84■■□□□ 1.09
GSKIP-202ENST00000553699 DNAJC5BQ9UF47 199 aa21.74■■□□□ 1.07
GSKIP-202ENST00000553699 CCDC180Q9P1Z9 1646 aa21.2■□□□□ 0.98
GSKIP-202ENST00000553699 DNAJC5Q9H3Z4 198 aa20.98■□□□□ 0.95
GSKIP-202ENST00000553699 PABPN1Q86U42 306 aaKnown RBP eCLIP20.21■□□□□ 0.83
GSKIP-202ENST00000553699 RB1CC1Q8TDY2 1594 aa20.18■□□□□ 0.82
GSKIP-202ENST00000553699 NACADO15069 1562 aa19.96■□□□□ 0.79
GSKIP-202ENST00000553699 CECR2Q9BXF3 1484 aa19.83■□□□□ 0.76
GSKIP-202ENST00000553699 DCAF8L2P0C7V8 631 aa19.8■□□□□ 0.76
GSKIP-202ENST00000553699 MYO15BQ96JP2 1530 aa19.78■□□□□ 0.76
GSKIP-202ENST00000553699 ZCCHC6Q5VYS8 1495 aaKnown RBP19.7■□□□□ 0.74
GSKIP-202ENST00000553699 CC2D2AQ9P2K1 1620 aa19.62■□□□□ 0.73
GSKIP-202ENST00000553699 DCAF1Q9Y4B6 1507 aa19.61■□□□□ 0.73
GSKIP-202ENST00000553699 BICRAQ9NZM4 1560 aa19.6■□□□□ 0.73
GSKIP-202ENST00000553699 UNC13AQ9UPW8 1703 aa19.56■□□□□ 0.72
GSKIP-202ENST00000553699 TRIM41Q8WV44 630 aa19.49■□□□□ 0.71
GSKIP-202ENST00000553699 CUX2O14529 1486 aa19.38■□□□□ 0.69
GSKIP-202ENST00000553699 SCRIBQ14160 1630 aa19.29■□□□□ 0.68
GSKIP-202ENST00000553699 SHROOM4Q9ULL8 1493 aa19.26■□□□□ 0.67
GSKIP-202ENST00000553699 EIF4G1Q04637 1599 aaKnown RBP19.25■□□□□ 0.67
GSKIP-202ENST00000553699 ERCC6Q03468 1493 aa18.97■□□□□ 0.63
GSKIP-202ENST00000553699 AEBP2Q6ZN18 517 aaPredicted RBP18.76■□□□□ 0.59
GSKIP-202ENST00000553699 SMARCA4P51532 1647 aa18.44■□□□□ 0.54
GSKIP-202ENST00000553699 OSCARQ8IYS5 282 aa18.41■□□□□ 0.54
GSKIP-202ENST00000553699 NCAPD3P42695 1498 aa18.39■□□□□ 0.54
GSKIP-202ENST00000553699 BAZ1AQ9NRL2 1556 aaPredicted RBP18.39■□□□□ 0.53
GSKIP-202ENST00000553699 SMARCA2P51531 1590 aa18.37■□□□□ 0.53
GSKIP-202ENST00000553699 THOC2Q8NI27 1593 aaKnown RBP18.37■□□□□ 0.53
GSKIP-202ENST00000553699 NESP48681 1621 aa18.36■□□□□ 0.53
GSKIP-202ENST00000553699 ATAD2BQ9ULI0 1458 aa18.36■□□□□ 0.53
GSKIP-202ENST00000553699 HMGXB3Q12766 1538 aa18.33■□□□□ 0.52
GSKIP-202ENST00000553699 TRHP20396 242 aaPredicted RBP18.28■□□□□ 0.52
GSKIP-202ENST00000553699 PEG3Q9GZU2 1588 aa18.27■□□□□ 0.52
GSKIP-202ENST00000553699 MROH2BQ7Z745 1585 aa18.23■□□□□ 0.51
GSKIP-202ENST00000553699 BAZ1BQ9UIG0 1483 aaKnown RBP18.22■□□□□ 0.51
GSKIP-202ENST00000553699 ILDR1Q86SU0 546 aaPredicted RBP18.17■□□□□ 0.5
GSKIP-202ENST00000553699 RIMBP3CA6NJZ7 1639 aa18.12■□□□□ 0.49
GSKIP-202ENST00000553699 RIMBP3BA6NNM3 1639 aa18.12■□□□□ 0.49
GSKIP-202ENST00000553699 RIMBP3Q9UFD9 1639 aa18.12■□□□□ 0.49
GSKIP-202ENST00000553699 PDS5BQ9NTI5 1447 aa18.06■□□□□ 0.48
GSKIP-202ENST00000553699 CYB5RLQ6IPT4 315 aa18.04■□□□□ 0.48
GSKIP-202ENST00000553699 WIZO95785 1651 aa18.03■□□□□ 0.48
GSKIP-202ENST00000553699 LAMC3Q9Y6N6 1575 aa18.02■□□□□ 0.48
GSKIP-202ENST00000553699 KIF21AQ7Z4S6 1674 aa17.98■□□□□ 0.47
GSKIP-202ENST00000553699 ARHGEF11O15085 1522 aa17.96■□□□□ 0.47
GSKIP-202ENST00000553699 RSF1Q96T23 1441 aaPredicted RBP17.93■□□□□ 0.46
GSKIP-202ENST00000553699 MRC2Q9UBG0 1479 aa17.91■□□□□ 0.46
GSKIP-202ENST00000553699 WDR62O43379 1518 aa17.87■□□□□ 0.45
GSKIP-202ENST00000553699 TOP2AP11388 1531 aaKnown RBP17.86■□□□□ 0.45
GSKIP-202ENST00000553699 CADPSQ9ULU8 1353 aa17.83■□□□□ 0.45
GSKIP-202ENST00000553699 CFTRP13569 1480 aa17.7■□□□□ 0.42
GSKIP-202ENST00000553699 ARAP1Q96P48 1450 aa17.69■□□□□ 0.42
GSKIP-202ENST00000553699 CEP164Q9UPV0 1460 aa17.67■□□□□ 0.42
GSKIP-202ENST00000553699 FANCD2Q9BXW9 1451 aa17.65■□□□□ 0.42
GSKIP-202ENST00000553699 CCDC88BA6NC98 1476 aa17.6■□□□□ 0.41
GSKIP-202ENST00000553699 PRDM2Q13029 1718 aa17.58■□□□□ 0.41
GSKIP-202ENST00000553699 URB2Q14146 1524 aaKnown RBP17.48■□□□□ 0.39
GSKIP-202ENST00000553699 ZNF608Q9ULD9 1512 aaPredicted RBP17.37■□□□□ 0.37
GSKIP-202ENST00000553699 ABCC8Q09428 1581 aa17.35■□□□□ 0.37
GSKIP-202ENST00000553699 KDM4FA0A1W2PPD8 638 aa17.34■□□□□ 0.37
GSKIP-202ENST00000553699 TOPBP1Q92547 1522 aa17.34■□□□□ 0.37
GSKIP-202ENST00000553699 DNMBPQ6XZF7 1577 aa17.32■□□□□ 0.36
GSKIP-202ENST00000553699 FBLN2P98095 1184 aa17.32■□□□□ 0.36
GSKIP-202ENST00000553699 IFT140Q96RY7 1462 aa17.3■□□□□ 0.36
GSKIP-202ENST00000553699 SUPT5HO00267 1087 aaKnown RBP17.28■□□□□ 0.36
GSKIP-202ENST00000553699 FBXO41Q8TF61 875 aa17.25■□□□□ 0.35
GSKIP-202ENST00000553699 CHD1O14646 1710 aa17.21■□□□□ 0.35
GSKIP-202ENST00000553699 POLA1P09884 1462 aaPredicted RBP17.18■□□□□ 0.34
GSKIP-202ENST00000553699 EIF4G3O43432 1585 aaKnown RBP17.18■□□□□ 0.34
GSKIP-202ENST00000553699 TARBP1Q13395 1621 aaKnown RBP17.18■□□□□ 0.34
GSKIP-202ENST00000553699 LMTK3Q96Q04 1460 aa17.14■□□□□ 0.33
GSKIP-202ENST00000553699 CUX1P39880 1505 aa17.12■□□□□ 0.33
GSKIP-202ENST00000553699 SOCS7O14512 581 aa17.12■□□□□ 0.33
GSKIP-202ENST00000553699 FGD5Q6ZNL6 1462 aa17.12■□□□□ 0.33
GSKIP-202ENST00000553699 ERCC6L2Q5T890 1561 aa17.1■□□□□ 0.33
GSKIP-202ENST00000553699 SOGA1O94964 1423 aa17.09■□□□□ 0.33
GSKIP-202ENST00000553699 AQRO60306 1485 aaKnown RBP eCLIP17.09■□□□□ 0.33
GSKIP-202ENST00000553699 RAD54L2Q9Y4B4 1467 aa17.08■□□□□ 0.32
GSKIP-202ENST00000553699 WDR97A6NE52 1622 aa17.07■□□□□ 0.32
GSKIP-202ENST00000553699 CLASP1Q7Z460 1538 aa17.06■□□□□ 0.32
GSKIP-202ENST00000553699 GAPVD1Q14C86 1478 aa17.05■□□□□ 0.32
GSKIP-202ENST00000553699 TDRD9Q8NDG6 1382 aaKnown RBP17■□□□□ 0.31
GSKIP-202ENST00000553699 CHMP7Q8WUX9 453 aaPredicted RBP16.99■□□□□ 0.31
GSKIP-202ENST00000553699 BIVM-ERCC5R4GMW8 1640 aa16.96■□□□□ 0.3
GSKIP-202ENST00000553699 SYNJ1O43426 1573 aa16.95■□□□□ 0.3
GSKIP-202ENST00000553699 HECW2Q9P2P5 1572 aa16.95■□□□□ 0.3
GSKIP-202ENST00000553699 GRIN2BQ13224 1484 aa16.94■□□□□ 0.3
GSKIP-202ENST00000553699 SNAPC4Q5SXM2 1469 aa16.94■□□□□ 0.3
GSKIP-202ENST00000553699 ILDR2Q71H61 639 aa16.94■□□□□ 0.3
GSKIP-202ENST00000553699 TOP2BQ02880 1626 aa16.94■□□□□ 0.3
GSKIP-202ENST00000553699 WRNQ14191 1432 aaPredicted RBP eCLIP16.94■□□□□ 0.3
GSKIP-202ENST00000553699 MAGI1Q96QZ7 1491 aaPredicted RBP16.93■□□□□ 0.3
GSKIP-202ENST00000553699 ABCA10Q8WWZ4 1543 aa16.93■□□□□ 0.3
GSKIP-202ENST00000553699 PBRM1Q86U86 1689 aa16.91■□□□□ 0.3
GSKIP-202ENST00000553699 ABCA5Q8WWZ7 1642 aa16.91■□□□□ 0.3
GSKIP-202ENST00000553699 KIF13AQ9H1H9 1805 aa16.89■□□□□ 0.29
GSKIP-202ENST00000553699 FAM69CQ0P6D2 419 aa16.88■□□□□ 0.29
GSKIP-202ENST00000553699 SYNJ2O15056 1496 aa16.86■□□□□ 0.29
GSKIP-202ENST00000553699 KDM6BO15054 1643 aa16.8■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms