RNA–Protein interactions for RNA: ENST00000553131.5

ERBB3-221, Transcript of erb-b2 receptor tyrosine kinase 3, humanhuman

TSL 2 BASIC

Gene ERBB3, Length 3,237 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB3-221ENST00000553131 P3H3Q8IVL6 736 aa10.99□□□□□ -0.65
ERBB3-221ENST00000553131 PAXIP1Q6ZW49 1069 aaPredicted RBP10.98□□□□□ -0.65
ERBB3-221ENST00000553131 HECW1Q76N89 1606 aa10.98□□□□□ -0.65
ERBB3-221ENST00000553131 FGD6Q6ZV73 1430 aa10.98□□□□□ -0.65
ERBB3-221ENST00000553131 GLIPR1L2Q4G1C9 344 aa10.98□□□□□ -0.65
ERBB3-221ENST00000553131 HFM1A2PYH4 1435 aa10.97□□□□□ -0.65
ERBB3-221ENST00000553131 PTPN23Q9H3S7 1636 aa10.97□□□□□ -0.65
ERBB3-221ENST00000553131 FHOD3Q2V2M9 1422 aa10.97□□□□□ -0.65
ERBB3-221ENST00000553131 PPP4R2Q9NY27 417 aa10.96□□□□□ -0.66
ERBB3-221ENST00000553131 IRX6P78412 446 aaPredicted RBP10.95□□□□□ -0.66
ERBB3-221ENST00000553131 FMN1Q68DA7 1419 aa10.93□□□□□ -0.66
ERBB3-221ENST00000553131 CADPSQ9ULU8 1353 aa10.92□□□□□ -0.66
ERBB3-221ENST00000553131 RSPH4AQ5TD94 716 aa10.92□□□□□ -0.66
ERBB3-221ENST00000553131 MTUS2Q5JR59 1369 aa10.92□□□□□ -0.66
ERBB3-221ENST00000553131 NAIPQ13075 1403 aa10.91□□□□□ -0.66
ERBB3-221ENST00000553131 PTPRKQ15262 1439 aa10.91□□□□□ -0.66
ERBB3-221ENST00000553131 VSIG10Q8N0Z9 540 aa10.91□□□□□ -0.66
ERBB3-221ENST00000553131 WASHC2AQ641Q2 1341 aa10.91□□□□□ -0.66
ERBB3-221ENST00000553131 GRIN2BQ13224 1484 aa10.9□□□□□ -0.66
ERBB3-221ENST00000553131 HSPA5P11021 654 aaKnown RBP10.9□□□□□ -0.66
ERBB3-221ENST00000553131 TCOF1Q13428 1488 aaKnown RBP10.9□□□□□ -0.66
ERBB3-221ENST00000553131 SUPT6HQ7KZ85 1726 aaKnown RBP10.9□□□□□ -0.67
ERBB3-221ENST00000553131 TPRNQ4KMQ1 711 aa10.9□□□□□ -0.67
ERBB3-221ENST00000553131 NCOA2Q15596 1464 aa10.89□□□□□ -0.67
ERBB3-221ENST00000553131 CNTLNQ9NXG0 1405 aa10.89□□□□□ -0.67
ERBB3-221ENST00000553131 DENND4BO75064 1496 aaPredicted RBP10.89□□□□□ -0.67
ERBB3-221ENST00000553131 EIF4G2P78344 907 aaKnown RBP eCLIP10.89□□□□□ -0.67
ERBB3-221ENST00000553131 AKNAQ7Z591 1439 aa10.89□□□□□ -0.67
ERBB3-221ENST00000553131 UGGT2Q9NYU1 1516 aa10.88□□□□□ -0.67
ERBB3-221ENST00000553131 MYOM3Q5VTT5 1437 aa10.88□□□□□ -0.67
ERBB3-221ENST00000553131 EHBP1L1Q8N3D4 1523 aa10.86□□□□□ -0.67
ERBB3-221ENST00000553131 TOPBP1Q92547 1522 aa10.86□□□□□ -0.67
ERBB3-221ENST00000553131 ZBED9Q6R2W3 1325 aa10.86□□□□□ -0.67
ERBB3-221ENST00000553131 POLA1P09884 1462 aaPredicted RBP10.85□□□□□ -0.67
ERBB3-221ENST00000553131 NAP1L5Q96NT1 182 aaPredicted RBP10.85□□□□□ -0.67
ERBB3-221ENST00000553131 PRKRIP1Q9H875 184 aaPredicted RBP10.84□□□□□ -0.67
ERBB3-221ENST00000553131 B4GALNT3Q6L9W6 998 aa10.84□□□□□ -0.67
ERBB3-221ENST00000553131 FAM9BQ8IZU0 186 aa10.84□□□□□ -0.67
ERBB3-221ENST00000553131 IL27Q8NEV9 243 aa10.84□□□□□ -0.67
ERBB3-221ENST00000553131 CNKSR2Q8WXI2 1034 aa10.84□□□□□ -0.67
ERBB3-221ENST00000553131 MRS2Q9HD23 443 aa10.84□□□□□ -0.67
ERBB3-221ENST00000553131 CCDC184Q52MB2 194 aa10.83□□□□□ -0.68
ERBB3-221ENST00000553131 LAMC3Q9Y6N6 1575 aa10.83□□□□□ -0.68
ERBB3-221ENST00000553131 NCOA1Q15788 1441 aa10.82□□□□□ -0.68
ERBB3-221ENST00000553131 TARBP1Q13395 1621 aaKnown RBP10.82□□□□□ -0.68
ERBB3-221ENST00000553131 CCDC7Q96M83 1385 aa10.82□□□□□ -0.68
ERBB3-221ENST00000553131 MAGI3Q5TCQ9 1506 aa10.82□□□□□ -0.68
ERBB3-221ENST00000553131 FANCD2Q9BXW9 1451 aa10.82□□□□□ -0.68
ERBB3-221ENST00000553131 RAD54L2Q9Y4B4 1467 aa10.82□□□□□ -0.68
ERBB3-221ENST00000553131 PBRM1Q86U86 1689 aa10.82□□□□□ -0.68
ERBB3-221ENST00000553131 ZNF326Q5BKZ1 582 aaKnown RBP10.82□□□□□ -0.68
ERBB3-221ENST00000553131 NOP58Q9Y2X3 529 aaKnown RBP10.82□□□□□ -0.68
ERBB3-221ENST00000553131 FBXO3Q9UK99 471 aa10.81□□□□□ -0.68
ERBB3-221ENST00000553131 RRP7BPQ9NSQ0 103 aa10.8□□□□□ -0.68
ERBB3-221ENST00000553131 ZBTB22O15209 634 aa10.79□□□□□ -0.68
ERBB3-221ENST00000553131 L3MBTL2Q969R5 705 aa10.79□□□□□ -0.68
ERBB3-221ENST00000553131 KDM6BO15054 1643 aa10.78□□□□□ -0.68
ERBB3-221ENST00000553131 MPHOSPH9Q99550 1183 aa10.78□□□□□ -0.68
ERBB3-221ENST00000553131 C11orf95C9JLR9 678 aaPredicted RBP10.77□□□□□ -0.68
ERBB3-221ENST00000553131 CHIC2Q9UKJ5 165 aa10.77□□□□□ -0.69
ERBB3-221ENST00000553131 SMG6Q86US8 1419 aaKnown RBP10.77□□□□□ -0.69
ERBB3-221ENST00000553131 CROCC2H7BZ55 1655 aa10.76□□□□□ -0.69
ERBB3-221ENST00000553131 URB2Q14146 1524 aaKnown RBP10.76□□□□□ -0.69
ERBB3-221ENST00000553131 ANP32AP39687 249 aaKnown RBP10.75□□□□□ -0.69
ERBB3-221ENST00000553131 NAP1L2Q9ULW6 460 aaPredicted RBP10.75□□□□□ -0.69
ERBB3-221ENST00000553131 DNMT1P26358 1616 aaKnown RBP10.74□□□□□ -0.69
ERBB3-221ENST00000553131 KIF7Q2M1P5 1343 aa10.74□□□□□ -0.69
ERBB3-221ENST00000553131 WDR62O43379 1518 aa10.74□□□□□ -0.69
ERBB3-221ENST00000553131 NESP48681 1621 aa10.74□□□□□ -0.69
ERBB3-221ENST00000553131 ADGBQ8N7X0 1667 aa10.73□□□□□ -0.69
ERBB3-221ENST00000553131 RPRD2Q5VT52 1461 aaKnown RBP10.73□□□□□ -0.69
ERBB3-221ENST00000553131 NBR1Q14596 966 aa10.73□□□□□ -0.69
ERBB3-221ENST00000553131 NUDCQ9Y266 331 aa10.73□□□□□ -0.69
ERBB3-221ENST00000553131 ADCY10Q96PN6 1610 aa10.73□□□□□ -0.69
ERBB3-221ENST00000553131 MIA2Q96PC5 1412 aa10.73□□□□□ -0.69
ERBB3-221ENST00000553131 PAK3O75914 559 aaPredicted RBP10.73□□□□□ -0.69
ERBB3-221ENST00000553131 CDK11BP21127 795 aaKnown RBP10.73□□□□□ -0.69
ERBB3-221ENST00000553131 IPO9Q96P70 1041 aaKnown RBP10.73□□□□□ -0.69
ERBB3-221ENST00000553131 SPATA31E1Q6ZUB1 1445 aa10.72□□□□□ -0.69
ERBB3-221ENST00000553131 ADAMTS12P58397 1594 aa10.72□□□□□ -0.69
ERBB3-221ENST00000553131 RNF123Q5XPI4 1314 aa10.72□□□□□ -0.69
ERBB3-221ENST00000553131 NBPF8Q3BBV2 869 aa10.71□□□□□ -0.69
ERBB3-221ENST00000553131 ANKRD30BQ9BXX2 1392 aa10.71□□□□□ -0.69
ERBB3-221ENST00000553131 TEX14Q8IWB6 1497 aa10.71□□□□□ -0.69
ERBB3-221ENST00000553131 MBD5Q9P267 1494 aa10.71□□□□□ -0.69
ERBB3-221ENST00000553131 RTL5Q5HYW3 569 aaPredicted RBP10.71□□□□□ -0.69
ERBB3-221ENST00000553131 E9PCH4 1651 aa10.71□□□□□ -0.7
ERBB3-221ENST00000553131 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.71□□□□□ -0.7
ERBB3-221ENST00000553131 ZBTB47Q9UFB7 747 aaPredicted RBP10.7□□□□□ -0.7
ERBB3-221ENST00000553131 FOXD1Q16676 465 aa10.7□□□□□ -0.7
ERBB3-221ENST00000553131 ROCK1Q13464 1354 aa10.69□□□□□ -0.7
ERBB3-221ENST00000553131 GAPVD1Q14C86 1478 aa10.68□□□□□ -0.7
ERBB3-221ENST00000553131 HSP90B1P14625 803 aaKnown RBP10.67□□□□□ -0.7
ERBB3-221ENST00000553131 BCCIPQ9P287 314 aaKnown RBP eCLIP10.67□□□□□ -0.7
ERBB3-221ENST00000553131 DHX29Q7Z478 1369 aaKnown RBP10.67□□□□□ -0.7
ERBB3-221ENST00000553131 IQGAP2Q13576 1575 aa10.67□□□□□ -0.7
ERBB3-221ENST00000553131 CHMP4BQ9H444 224 aaKnown RBP10.67□□□□□ -0.7
ERBB3-221ENST00000553131 EPRSP07814 1512 aaKnown RBP10.67□□□□□ -0.7
ERBB3-221ENST00000553131 TDRD9Q8NDG6 1382 aaKnown RBP10.66□□□□□ -0.7
ERBB3-221ENST00000553131 KIF14Q15058 1648 aa10.66□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 92.5 ms