RNA–Protein interactions for RNA: ENST00000553131.5

ERBB3-221, Transcript of erb-b2 receptor tyrosine kinase 3, humanhuman

TSL 2 BASIC

Gene ERBB3, Length 3,237 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB3-221ENST00000553131 NISCHQ9Y2I1 1504 aa15.71■□□□□ 0.11
ERBB3-221ENST00000553131 PELP1Q8IZL8 1130 aaKnown RBP14.06□□□□□ -0.16
ERBB3-221ENST00000553131 MYT1Q01538 1121 aa13.96□□□□□ -0.17
ERBB3-221ENST00000553131 CHIC1Q5VXU3 224 aa13.84□□□□□ -0.19
ERBB3-221ENST00000553131 AEBP2Q6ZN18 517 aaPredicted RBP13.73□□□□□ -0.21
ERBB3-221ENST00000553131 SLC24A1O60721 1099 aa13.63□□□□□ -0.23
ERBB3-221ENST00000553131 TTBK1Q5TCY1 1321 aaPredicted RBP13.58□□□□□ -0.24
ERBB3-221ENST00000553131 CCDC180Q9P1Z9 1646 aa13.57□□□□□ -0.24
ERBB3-221ENST00000553131 PRKCSHP14314 528 aaPredicted RBP13.49□□□□□ -0.25
ERBB3-221ENST00000553131 SHROOM4Q9ULL8 1493 aa13.44□□□□□ -0.26
ERBB3-221ENST00000553131 ZCCHC6Q5VYS8 1495 aaKnown RBP13.43□□□□□ -0.26
ERBB3-221ENST00000553131 SUPT5HO00267 1087 aaKnown RBP13.34□□□□□ -0.27
ERBB3-221ENST00000553131 HRCP23327 699 aa13.26□□□□□ -0.29
ERBB3-221ENST00000553131 APLP2Q06481 763 aa13.19□□□□□ -0.3
ERBB3-221ENST00000553131 DCAF1Q9Y4B6 1507 aa13.17□□□□□ -0.3
ERBB3-221ENST00000553131 ERICH6Q7L0X2 663 aa13.13□□□□□ -0.31
ERBB3-221ENST00000553131 MYO15BQ96JP2 1530 aa13.12□□□□□ -0.31
ERBB3-221ENST00000553131 PCGF6Q9BYE7 350 aa13.03□□□□□ -0.32
ERBB3-221ENST00000553131 PPARGC1BQ86YN6 1023 aaKnown RBP12.89□□□□□ -0.35
ERBB3-221ENST00000553131 DAXXQ9UER7 740 aaPredicted RBP12.87□□□□□ -0.35
ERBB3-221ENST00000553131 BCL11AQ9H165 835 aa12.81□□□□□ -0.36
ERBB3-221ENST00000553131 DCAF8L2P0C7V8 631 aa12.79□□□□□ -0.36
ERBB3-221ENST00000553131 ABCC9O60706 1549 aa12.78□□□□□ -0.36
ERBB3-221ENST00000553131 TRIM26Q12899 539 aaPredicted RBP12.75□□□□□ -0.37
ERBB3-221ENST00000553131 LOC105371045A0A1W2PR82 267 aa12.73□□□□□ -0.37
ERBB3-221ENST00000553131 ZEB1P37275 1124 aaPredicted RBP12.65□□□□□ -0.38
ERBB3-221ENST00000553131 FAM9AQ8IZU1 332 aaPredicted RBP12.63□□□□□ -0.39
ERBB3-221ENST00000553131 PHF23Q9BUL5 403 aaPredicted RBP12.62□□□□□ -0.39
ERBB3-221ENST00000553131 RB1CC1Q8TDY2 1594 aa12.46□□□□□ -0.41
ERBB3-221ENST00000553131 SCAF1Q9H7N4 1312 aaKnown RBP12.46□□□□□ -0.41
ERBB3-221ENST00000553131 EIF4G1Q04637 1599 aaKnown RBP12.44□□□□□ -0.42
ERBB3-221ENST00000553131 EIF5BO60841 1220 aaKnown RBP12.43□□□□□ -0.42
ERBB3-221ENST00000553131 TRIM41Q8WV44 630 aa12.43□□□□□ -0.42
ERBB3-221ENST00000553131 RSF1Q96T23 1441 aaPredicted RBP12.4□□□□□ -0.42
ERBB3-221ENST00000553131 EHMT2Q96KQ7 1210 aa12.32□□□□□ -0.44
ERBB3-221ENST00000553131 SCRIBQ14160 1630 aa12.31□□□□□ -0.44
ERBB3-221ENST00000553131 NACADO15069 1562 aa12.28□□□□□ -0.44
ERBB3-221ENST00000553131 BAZ1AQ9NRL2 1556 aaPredicted RBP12.25□□□□□ -0.45
ERBB3-221ENST00000553131 PLEKHG5O94827 1062 aa12.21□□□□□ -0.45
ERBB3-221ENST00000553131 ACIN1Q9UKV3 1341 aaKnown RBP12.21□□□□□ -0.46
ERBB3-221ENST00000553131 CCER1Q8TC90 406 aaPredicted RBP12.16□□□□□ -0.46
ERBB3-221ENST00000553131 MROH2BQ7Z745 1585 aa12.14□□□□□ -0.47
ERBB3-221ENST00000553131 WIZO95785 1651 aa12.14□□□□□ -0.47
ERBB3-221ENST00000553131 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.14□□□□□ -0.47
ERBB3-221ENST00000553131 CENPBP07199 599 aaPredicted RBP12.13□□□□□ -0.47
ERBB3-221ENST00000553131 NEUROD1Q13562 356 aa12.13□□□□□ -0.47
ERBB3-221ENST00000553131 DIEXFQ68CQ4 756 aaKnown RBP12.09□□□□□ -0.47
ERBB3-221ENST00000553131 UNC13AQ9UPW8 1703 aa12.08□□□□□ -0.48
ERBB3-221ENST00000553131 CECR2Q9BXF3 1484 aa12.07□□□□□ -0.48
ERBB3-221ENST00000553131 GTF3C3Q9Y5Q9 886 aa12.06□□□□□ -0.48
ERBB3-221ENST00000553131 TOP2AP11388 1531 aaKnown RBP12.03□□□□□ -0.48
ERBB3-221ENST00000553131 NCBP3Q53F19 620 aaKnown RBP12.03□□□□□ -0.48
ERBB3-221ENST00000553131 WRNQ14191 1432 aaPredicted RBP eCLIP12.03□□□□□ -0.48
ERBB3-221ENST00000553131 SMARCA4P51532 1647 aa11.99□□□□□ -0.49
ERBB3-221ENST00000553131 SMARCA2P51531 1590 aa11.98□□□□□ -0.49
ERBB3-221ENST00000553131 PEG3Q9GZU2 1588 aa11.96□□□□□ -0.5
ERBB3-221ENST00000553131 UBE2Q2Q8WVN8 375 aa11.94□□□□□ -0.5
ERBB3-221ENST00000553131 ZNF316A6NFI3 1004 aaPredicted RBP11.93□□□□□ -0.5
ERBB3-221ENST00000553131 CEP162Q5TB80 1403 aa11.93□□□□□ -0.5
ERBB3-221ENST00000553131 PODXL2Q9NZ53 605 aa11.93□□□□□ -0.5
ERBB3-221ENST00000553131 TNIKQ9UKE5 1360 aa11.9□□□□□ -0.5
ERBB3-221ENST00000553131 CCDC88BA6NC98 1476 aa11.87□□□□□ -0.51
ERBB3-221ENST00000553131 ANP32EQ9BTT0 268 aa11.86□□□□□ -0.51
ERBB3-221ENST00000553131 ABCC8Q09428 1581 aa11.86□□□□□ -0.51
ERBB3-221ENST00000553131 EEA1Q15075 1411 aa11.86□□□□□ -0.51
ERBB3-221ENST00000553131 KIF21BO75037 1637 aa11.83□□□□□ -0.52
ERBB3-221ENST00000553131 ANO8Q9HCE9 1232 aaPredicted RBP11.82□□□□□ -0.52
ERBB3-221ENST00000553131 SOGA1O94964 1423 aa11.81□□□□□ -0.52
ERBB3-221ENST00000553131 KLHL34Q8N239 644 aa11.81□□□□□ -0.52
ERBB3-221ENST00000553131 CSRNP3Q8WYN3 585 aa11.81□□□□□ -0.52
ERBB3-221ENST00000553131 YTHDC1Q96MU7 727 aaKnown RBP11.81□□□□□ -0.52
ERBB3-221ENST00000553131 PLPPR3Q6T4P5 718 aa11.81□□□□□ -0.52
ERBB3-221ENST00000553131 UBTFP17480 764 aaKnown RBP11.8□□□□□ -0.52
ERBB3-221ENST00000553131 GOLGA3Q08378 1498 aa11.78□□□□□ -0.52
ERBB3-221ENST00000553131 MIER1Q8N108 512 aa11.77□□□□□ -0.53
ERBB3-221ENST00000553131 BICRAQ9NZM4 1560 aa11.77□□□□□ -0.53
ERBB3-221ENST00000553131 ARXQ96QS3 562 aa11.76□□□□□ -0.53
ERBB3-221ENST00000553131 RUSC2Q8N2Y8 1516 aa11.73□□□□□ -0.53
ERBB3-221ENST00000553131 RTN4Q9NQC3 1192 aaKnown RBP11.73□□□□□ -0.53
ERBB3-221ENST00000553131 PKNOX2Q96KN3 472 aa11.71□□□□□ -0.53
ERBB3-221ENST00000553131 RANGAP1P46060 587 aaPredicted RBP11.71□□□□□ -0.54
ERBB3-221ENST00000553131 HNRNPUL2Q1KMD3 747 aaKnown RBP11.7□□□□□ -0.54
ERBB3-221ENST00000553131 TIMELESSQ9UNS1 1208 aa11.68□□□□□ -0.54
ERBB3-221ENST00000553131 BIVM-ERCC5R4GMW8 1640 aa11.68□□□□□ -0.54
ERBB3-221ENST00000553131 SYNJ1O43426 1573 aa11.68□□□□□ -0.54
ERBB3-221ENST00000553131 CEP164Q9UPV0 1460 aa11.68□□□□□ -0.54
ERBB3-221ENST00000553131 CLSPNQ9HAW4 1339 aa11.67□□□□□ -0.54
ERBB3-221ENST00000553131 BAZ1BQ9UIG0 1483 aaKnown RBP11.67□□□□□ -0.54
ERBB3-221ENST00000553131 CLIP1P30622 1438 aa11.65□□□□□ -0.54
ERBB3-221ENST00000553131 VPS8Q8N3P4 1428 aa11.64□□□□□ -0.55
ERBB3-221ENST00000553131 KCNA4P22459 653 aa11.62□□□□□ -0.55
ERBB3-221ENST00000553131 TOP2BQ02880 1626 aa11.6□□□□□ -0.55
ERBB3-221ENST00000553131 PRDM2Q13029 1718 aa11.58□□□□□ -0.56
ERBB3-221ENST00000553131 PABPN1Q86U42 306 aaKnown RBP eCLIP11.58□□□□□ -0.56
ERBB3-221ENST00000553131 ERICH3Q5RHP9 1530 aa11.57□□□□□ -0.56
ERBB3-221ENST00000553131 SUPT16HQ9Y5B9 1047 aaKnown RBP11.54□□□□□ -0.56
ERBB3-221ENST00000553131 PDIA4P13667 645 aaKnown RBP11.54□□□□□ -0.56
ERBB3-221ENST00000553131 CUX2O14529 1486 aa11.53□□□□□ -0.56
ERBB3-221ENST00000553131 DHX57Q6P158 1386 aaKnown RBP11.52□□□□□ -0.56
ERBB3-221ENST00000553131 RAPGEF2Q9Y4G8 1499 aa11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 103.4 ms