RNA–Protein interactions for RNA: ENST00000552674.5

SMARCC2-214, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 2, humanhuman

TSL 2

Gene SMARCC2, Length 3,730 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2-214ENST00000552674 CANXP27824 592 aaKnown RBP12.52□□□□□ -0.41
SMARCC2-214ENST00000552674 HFM1A2PYH4 1435 aa12.52□□□□□ -0.41
SMARCC2-214ENST00000552674 EXOC6Q8TAG9 804 aa12.51□□□□□ -0.41
SMARCC2-214ENST00000552674 PPM1GO15355 546 aaPredicted RBP12.51□□□□□ -0.41
SMARCC2-214ENST00000552674 NCOA2Q15596 1464 aa12.5□□□□□ -0.41
SMARCC2-214ENST00000552674 ARXQ96QS3 562 aa12.5□□□□□ -0.41
SMARCC2-214ENST00000552674 PCF11O94913 1555 aaKnown RBP12.5□□□□□ -0.41
SMARCC2-214ENST00000552674 NAIPQ13075 1403 aa12.5□□□□□ -0.41
SMARCC2-214ENST00000552674 FYCO1Q9BQS8 1478 aa12.49□□□□□ -0.41
SMARCC2-214ENST00000552674 RGS3P49796 1198 aa12.49□□□□□ -0.41
SMARCC2-214ENST00000552674 DDRGK1Q96HY6 314 aa12.48□□□□□ -0.41
SMARCC2-214ENST00000552674 ZNF644Q9H582 1327 aaPredicted RBP12.48□□□□□ -0.41
SMARCC2-214ENST00000552674 WDR43Q15061 677 aaKnown RBP eCLIP12.48□□□□□ -0.419e-6■■■□□ 15.6
SMARCC2-214ENST00000552674 TCERG1O14776 1098 aaKnown RBP12.48□□□□□ -0.41
SMARCC2-214ENST00000552674 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.48□□□□□ -0.41
SMARCC2-214ENST00000552674 PLIN1O60240 522 aa12.47□□□□□ -0.41
SMARCC2-214ENST00000552674 FANCD2Q9BXW9 1451 aa12.47□□□□□ -0.41
SMARCC2-214ENST00000552674 PDE4AP27815 886 aa12.47□□□□□ -0.41
SMARCC2-214ENST00000552674 MAP3K1Q13233 1512 aa12.47□□□□□ -0.41
SMARCC2-214ENST00000552674 ST20-MTHFSA0A0A6YYL1 179 aa12.46□□□□□ -0.42
SMARCC2-214ENST00000552674 PTPRKQ15262 1439 aa12.46□□□□□ -0.42
SMARCC2-214ENST00000552674 USP47Q96K76 1375 aa12.45□□□□□ -0.42
SMARCC2-214ENST00000552674 SLC4A3P48751 1232 aa12.45□□□□□ -0.42
SMARCC2-214ENST00000552674 RRP1P56182 461 aaKnown RBP12.45□□□□□ -0.42
SMARCC2-214ENST00000552674 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.44□□□□□ -0.42
SMARCC2-214ENST00000552674 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.43□□□□□ -0.42
SMARCC2-214ENST00000552674 AQRO60306 1485 aaKnown RBP eCLIP12.42□□□□□ -0.421e-7■■■■□ 24.9
SMARCC2-214ENST00000552674 IL27Q8NEV9 243 aa12.41□□□□□ -0.42
SMARCC2-214ENST00000552674 RALBP1Q15311 655 aa12.41□□□□□ -0.42
SMARCC2-214ENST00000552674 PLEKHD1A6NEE1 506 aa12.4□□□□□ -0.42
SMARCC2-214ENST00000552674 NUP155O75694 1391 aa12.4□□□□□ -0.42
SMARCC2-214ENST00000552674 ANO8Q9HCE9 1232 aaPredicted RBP12.4□□□□□ -0.42
SMARCC2-214ENST00000552674 NLRP13Q86W25 1043 aa12.39□□□□□ -0.43
SMARCC2-214ENST00000552674 CHMP7Q8WUX9 453 aaPredicted RBP12.39□□□□□ -0.43
SMARCC2-214ENST00000552674 KTN1Q86UP2 1357 aaKnown RBP12.39□□□□□ -0.43
SMARCC2-214ENST00000552674 MYBBP1AQ9BQG0 1328 aaKnown RBP12.39□□□□□ -0.43
SMARCC2-214ENST00000552674 PNISRQ8TF01 805 aaKnown RBP12.39□□□□□ -0.43
SMARCC2-214ENST00000552674 CDCA7LQ96GN5 454 aa12.38□□□□□ -0.43
SMARCC2-214ENST00000552674 KIF15Q9NS87 1388 aa12.38□□□□□ -0.43
SMARCC2-214ENST00000552674 SMG6Q86US8 1419 aaKnown RBP12.37□□□□□ -0.43
SMARCC2-214ENST00000552674 CRBNQ96SW2 442 aa12.37□□□□□ -0.43
SMARCC2-214ENST00000552674 KNSTRNQ9Y448 316 aa12.37□□□□□ -0.43
SMARCC2-214ENST00000552674 ROCK2O75116 1388 aaKnown RBP12.37□□□□□ -0.43
SMARCC2-214ENST00000552674 PTPN23Q9H3S7 1636 aa12.36□□□□□ -0.43
SMARCC2-214ENST00000552674 EFCAB5A4FU69 1503 aa12.36□□□□□ -0.43
SMARCC2-214ENST00000552674 SKAP1Q86WV1 359 aa12.36□□□□□ -0.43
SMARCC2-214ENST00000552674 NCOA1Q15788 1441 aa12.35□□□□□ -0.43
SMARCC2-214ENST00000552674 UPF2Q9HAU5 1272 aaKnown RBP12.35□□□□□ -0.43
SMARCC2-214ENST00000552674 NEUROD2Q15784 382 aa12.34□□□□□ -0.43
SMARCC2-214ENST00000552674 PDE3BQ13370 1112 aa12.33□□□□□ -0.44
SMARCC2-214ENST00000552674 USP35Q9P2H5 1018 aa12.33□□□□□ -0.44
SMARCC2-214ENST00000552674 POLA1P09884 1462 aaPredicted RBP12.33□□□□□ -0.44
SMARCC2-214ENST00000552674 GAPVD1Q14C86 1478 aa12.33□□□□□ -0.44
SMARCC2-214ENST00000552674 ANKRD30AQ9BXX3 1397 aa12.32□□□□□ -0.44
SMARCC2-214ENST00000552674 TMF1P82094 1093 aa12.31□□□□□ -0.44
SMARCC2-214ENST00000552674 FRAT1Q92837 279 aaPredicted RBP12.31□□□□□ -0.44
SMARCC2-214ENST00000552674 ANKRD30BQ9BXX2 1392 aa12.31□□□□□ -0.44
SMARCC2-214ENST00000552674 NESP48681 1621 aa12.31□□□□□ -0.44
SMARCC2-214ENST00000552674 MS4A1P11836 297 aa12.31□□□□□ -0.44
SMARCC2-214ENST00000552674 PANK3Q9H999 370 aa12.31□□□□□ -0.44
SMARCC2-214ENST00000552674 KIF21AQ7Z4S6 1674 aa12.3□□□□□ -0.44
SMARCC2-214ENST00000552674 HNRNPMP52272 730 aaKnown RBP eCLIP12.3□□□□□ -0.44
SMARCC2-214ENST00000552674 GSE1Q14687 1217 aa12.3□□□□□ -0.44
SMARCC2-214ENST00000552674 BACH2Q9BYV9 841 aa12.3□□□□□ -0.44
SMARCC2-214ENST00000552674 EHBP1L1Q8N3D4 1523 aa12.29□□□□□ -0.44
SMARCC2-214ENST00000552674 BECN1Q14457 450 aa12.29□□□□□ -0.44
SMARCC2-214ENST00000552674 SLKQ9H2G2 1235 aaPredicted RBP12.29□□□□□ -0.44
SMARCC2-214ENST00000552674 BRPF3Q9ULD4 1205 aa12.29□□□□□ -0.44
SMARCC2-214ENST00000552674 SUPT6HQ7KZ85 1726 aaKnown RBP12.28□□□□□ -0.44
SMARCC2-214ENST00000552674 TOPBP1Q92547 1522 aa12.28□□□□□ -0.44
SMARCC2-214ENST00000552674 CCDC146Q8IYE0 955 aa12.28□□□□□ -0.44
SMARCC2-214ENST00000552674 CHGAP10645 457 aaKnown RBP12.27□□□□□ -0.44
SMARCC2-214ENST00000552674 TNNT2P45379 298 aaPredicted RBP12.27□□□□□ -0.45
SMARCC2-214ENST00000552674 NFKBIBQ15653 356 aa12.27□□□□□ -0.45
SMARCC2-214ENST00000552674 SPRYD3Q8NCJ5 442 aa12.27□□□□□ -0.45
SMARCC2-214ENST00000552674 BRD4O60885 1362 aaPredicted RBP12.26□□□□□ -0.45
SMARCC2-214ENST00000552674 LAMC3Q9Y6N6 1575 aa12.26□□□□□ -0.45
SMARCC2-214ENST00000552674 CDK13Q14004 1512 aaKnown RBP12.26□□□□□ -0.45
SMARCC2-214ENST00000552674 CFAP43Q8NDM7 1665 aa12.25□□□□□ -0.45
SMARCC2-214ENST00000552674 GOLGA2Q08379 1002 aa12.25□□□□□ -0.45
SMARCC2-214ENST00000552674 ARID4BQ4LE39 1312 aaPredicted RBP12.25□□□□□ -0.45
SMARCC2-214ENST00000552674 ABCA10Q8WWZ4 1543 aa12.25□□□□□ -0.45
SMARCC2-214ENST00000552674 PDS5BQ9NTI5 1447 aa12.24□□□□□ -0.45
SMARCC2-214ENST00000552674 FAM161AQ3B820 660 aa12.24□□□□□ -0.45
SMARCC2-214ENST00000552674 RPRD2Q5VT52 1461 aaKnown RBP12.24□□□□□ -0.45
SMARCC2-214ENST00000552674 DAPK1P53355 1430 aa12.23□□□□□ -0.45
SMARCC2-214ENST00000552674 MIA2Q96PC5 1412 aa12.23□□□□□ -0.45
SMARCC2-214ENST00000552674 NBPF1Q3BBV0 1214 aa12.23□□□□□ -0.45
SMARCC2-214ENST00000552674 CENPQQ7L2Z9 268 aaPredicted RBP12.23□□□□□ -0.45
SMARCC2-214ENST00000552674 HSP90AA1P07900 732 aaKnown RBP12.22□□□□□ -0.45
SMARCC2-214ENST00000552674 SENP3Q9H4L4 574 aaPredicted RBP12.22□□□□□ -0.45
SMARCC2-214ENST00000552674 ADAMTS8Q9UP79 889 aa12.22□□□□□ -0.45
SMARCC2-214ENST00000552674 EPRSP07814 1512 aaKnown RBP12.21□□□□□ -0.45
SMARCC2-214ENST00000552674 PRKCSHP14314 528 aaPredicted RBP12.21□□□□□ -0.45
SMARCC2-214ENST00000552674 CDCA8Q53HL2 280 aa12.21□□□□□ -0.45
SMARCC2-214ENST00000552674 ANKRD50Q9ULJ7 1429 aa12.21□□□□□ -0.46
SMARCC2-214ENST00000552674 KIAA1107Q9UPP5 1409 aa12.21□□□□□ -0.46
SMARCC2-214ENST00000552674 C20orf194Q5TEA3 1177 aa12.2□□□□□ -0.46
SMARCC2-214ENST00000552674 GZF1Q9H116 711 aaPredicted RBP12.2□□□□□ -0.46
SMARCC2-214ENST00000552674 SNAPC4Q5SXM2 1469 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms