RNA–Protein interactions for RNA: ENST00000552645.5

LETMD1-234, Transcript of LETM1 domain containing 1, humanhuman

TSL 1 (best)

Gene LETMD1, Length 1,623 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETMD1-234ENST00000552645 EFCAB2Q5VUJ9 269 aa15.48■□□□□ 0.07
LETMD1-234ENST00000552645 ZNF777Q9ULD5 760 aaPredicted RBP15.47■□□□□ 0.07
LETMD1-234ENST00000552645 NCOA2Q15596 1464 aa15.47■□□□□ 0.07
LETMD1-234ENST00000552645 COL17A1Q9UMD9 1497 aaPredicted RBP15.47■□□□□ 0.07
LETMD1-234ENST00000552645 AKNAQ7Z591 1439 aa15.47■□□□□ 0.07
LETMD1-234ENST00000552645 ITSN2Q9NZM3 1697 aa15.45■□□□□ 0.06
LETMD1-234ENST00000552645 HRCP23327 699 aa15.45■□□□□ 0.06
LETMD1-234ENST00000552645 PPARGC1BQ86YN6 1023 aaKnown RBP15.45■□□□□ 0.06
LETMD1-234ENST00000552645 CFDP1Q9UEE9 299 aaPredicted RBP15.45■□□□□ 0.06
LETMD1-234ENST00000552645 ARAP3Q8WWN8 1544 aa15.45■□□□□ 0.06
LETMD1-234ENST00000552645 GPATCH8Q9UKJ3 1502 aaKnown RBP15.45■□□□□ 0.06
LETMD1-234ENST00000552645 RAPGEF3O95398 923 aa15.44■□□□□ 0.06
LETMD1-234ENST00000552645 PHLDB1Q86UU1 1377 aa15.44■□□□□ 0.06
LETMD1-234ENST00000552645 ADGRL1O94910 1474 aa15.44■□□□□ 0.06
LETMD1-234ENST00000552645 PELP1Q8IZL8 1130 aaKnown RBP15.43■□□□□ 0.06
LETMD1-234ENST00000552645 SCAPERQ9BY12 1400 aa15.42■□□□□ 0.06
LETMD1-234ENST00000552645 DENND4BO75064 1496 aaPredicted RBP15.4■□□□□ 0.06
LETMD1-234ENST00000552645 RICTORQ6R327 1708 aa15.4■□□□□ 0.06
LETMD1-234ENST00000552645 SAMD9LQ8IVG5 1584 aa15.4■□□□□ 0.06
LETMD1-234ENST00000552645 FRMPD1Q5SYB0 1578 aa15.38■□□□□ 0.05
LETMD1-234ENST00000552645 ABCC1P33527 1531 aa15.38■□□□□ 0.05
LETMD1-234ENST00000552645 ZNF644Q9H582 1327 aaPredicted RBP15.37■□□□□ 0.05
LETMD1-234ENST00000552645 MYT1LQ9UL68 1186 aa15.37■□□□□ 0.05
LETMD1-234ENST00000552645 SYCP2Q9BX26 1530 aa15.36■□□□□ 0.05
LETMD1-234ENST00000552645 HNRNPMP52272 730 aaKnown RBP eCLIP15.35■□□□□ 0.05
LETMD1-234ENST00000552645 MYOM3Q5VTT5 1437 aa15.35■□□□□ 0.05
LETMD1-234ENST00000552645 POGZQ7Z3K3 1410 aa15.35■□□□□ 0.05
LETMD1-234ENST00000552645 AFAP1Q8N556 730 aa15.35■□□□□ 0.05
LETMD1-234ENST00000552645 ARHGEF12Q9NZN5 1544 aa15.34■□□□□ 0.05
LETMD1-234ENST00000552645 CAMSAP2Q08AD1 1489 aa15.33■□□□□ 0.05
LETMD1-234ENST00000552645 ZNF518AQ6AHZ1 1483 aa15.33■□□□□ 0.04
LETMD1-234ENST00000552645 TRAPPC8Q9Y2L5 1435 aa15.33■□□□□ 0.04
LETMD1-234ENST00000552645 PLEKHH2Q8IVE3 1493 aa15.32■□□□□ 0.04
LETMD1-234ENST00000552645 PTPN23Q9H3S7 1636 aa15.29■□□□□ 0.04
LETMD1-234ENST00000552645 ZMYM4Q5VZL5 1548 aa15.29■□□□□ 0.04
LETMD1-234ENST00000552645 ZFYVE16Q7Z3T8 1539 aa15.28■□□□□ 0.04
LETMD1-234ENST00000552645 MIA2Q96PC5 1412 aa15.28■□□□□ 0.04
LETMD1-234ENST00000552645 KIAA1107Q9UPP5 1409 aa15.28■□□□□ 0.04
LETMD1-234ENST00000552645 KDM5CP41229 1560 aa15.28■□□□□ 0.04
LETMD1-234ENST00000552645 HECW2Q9P2P5 1572 aa15.28■□□□□ 0.04
LETMD1-234ENST00000552645 FGD6Q6ZV73 1430 aa15.28■□□□□ 0.04
LETMD1-234ENST00000552645 ARHGEF40Q8TER5 1519 aa15.27■□□□□ 0.04
LETMD1-234ENST00000552645 YEATS2Q9ULM3 1422 aa15.27■□□□□ 0.03
LETMD1-234ENST00000552645 SPAG9O60271 1321 aaKnown RBP15.27■□□□□ 0.03
LETMD1-234ENST00000552645 FAM50AQ14320 339 aaKnown RBP15.26■□□□□ 0.03
LETMD1-234ENST00000552645 MBD5Q9P267 1494 aa15.25■□□□□ 0.03
LETMD1-234ENST00000552645 MAGI2Q86UL8 1455 aa15.25■□□□□ 0.03
LETMD1-234ENST00000552645 ARID4BQ4LE39 1312 aaPredicted RBP15.24■□□□□ 0.03
LETMD1-234ENST00000552645 CCDC141Q6ZP82 1450 aa15.24■□□□□ 0.03
LETMD1-234ENST00000552645 KIDINS220Q9ULH0 1771 aa15.24■□□□□ 0.03
LETMD1-234ENST00000552645 ARHGEF5Q12774 1597 aa15.22■□□□□ 0.03
LETMD1-234ENST00000552645 ABCA6Q8N139 1617 aa15.22■□□□□ 0.03
LETMD1-234ENST00000552645 MLH3Q9UHC1 1453 aa15.22■□□□□ 0.03
LETMD1-234ENST00000552645 ATP7AQ04656 1500 aa15.22■□□□□ 0.03
LETMD1-234ENST00000552645 TSPY4P0CV99 314 aa15.21■□□□□ 0.03
LETMD1-234ENST00000552645 TSPY10P0CW01 314 aa15.21■□□□□ 0.03
LETMD1-234ENST00000552645 RSPH4AQ5TD94 716 aa15.21■□□□□ 0.02
LETMD1-234ENST00000552645 INO80Q9ULG1 1556 aaPredicted RBP15.21■□□□□ 0.02
LETMD1-234ENST00000552645 DIP2CQ9Y2E4 1556 aa15.21■□□□□ 0.02
LETMD1-234ENST00000552645 ATP10AO60312 1499 aa15.2■□□□□ 0.02
LETMD1-234ENST00000552645 TCOF1Q13428 1488 aaKnown RBP15.2■□□□□ 0.02
LETMD1-234ENST00000552645 SIGLEC1Q9BZZ2 1709 aa15.18■□□□□ 0.02
LETMD1-234ENST00000552645 CROCC2H7BZ55 1655 aa15.18■□□□□ 0.02
LETMD1-234ENST00000552645 C9orf84Q5VXU9 1444 aa15.18■□□□□ 0.02
LETMD1-234ENST00000552645 DNMT1P26358 1616 aaKnown RBP15.18■□□□□ 0.02
LETMD1-234ENST00000552645 ITGAEP38570 1179 aa15.17■□□□□ 0.02
LETMD1-234ENST00000552645 MLECQ14165 292 aa15.17■□□□□ 0.02
LETMD1-234ENST00000552645 DAPK1P53355 1430 aa15.16■□□□□ 0.02
LETMD1-234ENST00000552645 CHIC2Q9UKJ5 165 aa15.16■□□□□ 0.02
LETMD1-234ENST00000552645 ADGBQ8N7X0 1667 aa15.16■□□□□ 0.02
LETMD1-234ENST00000552645 ABCC5O15440 1437 aa15.16■□□□□ 0.02
LETMD1-234ENST00000552645 RTEL1-TNFRSF6BF6WH68 1400 aa15.14■□□□□ 0.01
LETMD1-234ENST00000552645 BCORL1Q5H9F3 1711 aa15.12■□□□□ 0.01
LETMD1-234ENST00000552645 A2MP01023 1474 aa15.12■□□□□ 0.01
LETMD1-234ENST00000552645 MAST1Q9Y2H9 1570 aa15.12■□□□□ 0.01
LETMD1-234ENST00000552645 KDM4FA0A1W2PPD8 638 aa15.11■□□□□ 0.01
LETMD1-234ENST00000552645 REREQ9P2R6 1566 aa15.1■□□□□ 0.01
LETMD1-234ENST00000552645 SHANK2Q9UPX8 1470 aa15.1■□□□□ 0.01
LETMD1-234ENST00000552645 RRP7BPQ9NSQ0 103 aa15.1■□□□□ 0.01
LETMD1-234ENST00000552645 RRBP1Q9P2E9 1410 aaKnown RBP15.1■□□□□ 0.01
LETMD1-234ENST00000552645 PLXNC1O60486 1568 aa15.09■□□□□ 0.01
LETMD1-234ENST00000552645 MADDQ8WXG6 1647 aa15.08■□□□□ 0
LETMD1-234ENST00000552645 FER1L4A9Z1Z3 1794 aa15.08■□□□□ 0
LETMD1-234ENST00000552645 KIF15Q9NS87 1388 aa15.07■□□□□ 0
LETMD1-234ENST00000552645 PLPPR3Q6T4P5 718 aa15.07■□□□□ 0
LETMD1-234ENST00000552645 ADAMTSL3P82987 1691 aa15.07■□□□□ 0
LETMD1-234ENST00000552645 DHX29Q7Z478 1369 aaKnown RBP15.07■□□□□ 0
LETMD1-234ENST00000552645 ANKRD30AQ9BXX3 1397 aa15.07■□□□□ 0
LETMD1-234ENST00000552645 GGT6Q6P531 493 aa15.06■□□□□ 0
LETMD1-234ENST00000552645 AEBP2Q6ZN18 517 aaPredicted RBP15.06■□□□□ 0
LETMD1-234ENST00000552645 RIMS1Q86UR5 1692 aaKnown RBP15.06■□□□□ 0
LETMD1-234ENST00000552645 AGLP35573 1532 aa15.06■□□□□ 0
LETMD1-234ENST00000552645 PTPRKQ15262 1439 aa15.06■□□□□ 0
LETMD1-234ENST00000552645 KIF3BO15066 747 aa15.06■□□□□ 0
LETMD1-234ENST00000552645 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP15.05■□□□□ 0
LETMD1-234ENST00000552645 DUOX2Q9NRD8 1548 aa15.04■□□□□ -0
LETMD1-234ENST00000552645 ESF1Q9H501 851 aaKnown RBP15.04■□□□□ -0
LETMD1-234ENST00000552645 NCOA1Q15788 1441 aa15.04■□□□□ -0
LETMD1-234ENST00000552645 ADGRL2O95490 1459 aa15.02□□□□□ -0.01
LETMD1-234ENST00000552645 EIF2AK4Q9P2K8 1649 aaKnown RBP15□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms