RNA–Protein interactions for RNA: ENST00000552213.1

CHPT1-207, Transcript of choline phosphotransferase 1, humanhuman

TSL 3

Gene CHPT1, Length 598 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHPT1-207ENST00000552213 COL17A1Q9UMD9 1497 aaPredicted RBP20.47■□□□□ 0.87
CHPT1-207ENST00000552213 NCOA2Q15596 1464 aa20.46■□□□□ 0.87
CHPT1-207ENST00000552213 ZNF777Q9ULD5 760 aaPredicted RBP20.46■□□□□ 0.87
CHPT1-207ENST00000552213 ARAP3Q8WWN8 1544 aa20.46■□□□□ 0.87
CHPT1-207ENST00000552213 GPATCH8Q9UKJ3 1502 aaKnown RBP20.45■□□□□ 0.86
CHPT1-207ENST00000552213 CFAP74Q9C0B2 1584 aa20.45■□□□□ 0.86
CHPT1-207ENST00000552213 SUPT6HQ7KZ85 1726 aaKnown RBP20.44■□□□□ 0.86
CHPT1-207ENST00000552213 RAPGEF3O95398 923 aa20.43■□□□□ 0.86
CHPT1-207ENST00000552213 ADGRL1O94910 1474 aa20.42■□□□□ 0.86
CHPT1-207ENST00000552213 PREX2Q70Z35 1606 aa20.42■□□□□ 0.86
CHPT1-207ENST00000552213 SCAPERQ9BY12 1400 aa20.41■□□□□ 0.86
CHPT1-207ENST00000552213 DENND4BO75064 1496 aaPredicted RBP20.41■□□□□ 0.86
CHPT1-207ENST00000552213 CDC42BPAQ5VT25 1732 aa20.39■□□□□ 0.85
CHPT1-207ENST00000552213 CDC42BPBQ9Y5S2 1711 aa20.38■□□□□ 0.85
CHPT1-207ENST00000552213 PPARGC1BQ86YN6 1023 aaKnown RBP20.36■□□□□ 0.85
CHPT1-207ENST00000552213 ITSN2Q9NZM3 1697 aa20.34■□□□□ 0.85
CHPT1-207ENST00000552213 ZNF644Q9H582 1327 aaPredicted RBP20.33■□□□□ 0.85
CHPT1-207ENST00000552213 POGZQ7Z3K3 1410 aa20.33■□□□□ 0.84
CHPT1-207ENST00000552213 HNRNPMP52272 730 aaKnown RBP eCLIP20.32■□□□□ 0.84
CHPT1-207ENST00000552213 AFAP1Q8N556 730 aa20.32■□□□□ 0.84
CHPT1-207ENST00000552213 MYOM3Q5VTT5 1437 aa20.32■□□□□ 0.84
CHPT1-207ENST00000552213 PLEKHH2Q8IVE3 1493 aa20.31■□□□□ 0.84
CHPT1-207ENST00000552213 MYT1LQ9UL68 1186 aa20.31■□□□□ 0.84
CHPT1-207ENST00000552213 ABCC1P33527 1531 aa20.31■□□□□ 0.84
CHPT1-207ENST00000552213 SAMD9LQ8IVG5 1584 aa20.29■□□□□ 0.84
CHPT1-207ENST00000552213 ZNF518AQ6AHZ1 1483 aa20.29■□□□□ 0.84
CHPT1-207ENST00000552213 KIAA1107Q9UPP5 1409 aa20.28■□□□□ 0.84
CHPT1-207ENST00000552213 ARHGEF12Q9NZN5 1544 aa20.28■□□□□ 0.84
CHPT1-207ENST00000552213 FRMPD1Q5SYB0 1578 aa20.28■□□□□ 0.84
CHPT1-207ENST00000552213 MIA2Q96PC5 1412 aa20.27■□□□□ 0.84
CHPT1-207ENST00000552213 TRAPPC8Q9Y2L5 1435 aa20.27■□□□□ 0.84
CHPT1-207ENST00000552213 SYCP2Q9BX26 1530 aa20.27■□□□□ 0.83
CHPT1-207ENST00000552213 CAMSAP2Q08AD1 1489 aa20.25■□□□□ 0.83
CHPT1-207ENST00000552213 RICTORQ6R327 1708 aa20.25■□□□□ 0.83
CHPT1-207ENST00000552213 MAGI2Q86UL8 1455 aa20.23■□□□□ 0.83
CHPT1-207ENST00000552213 SPAG9O60271 1321 aaKnown RBP20.23■□□□□ 0.83
CHPT1-207ENST00000552213 ZMYM4Q5VZL5 1548 aa20.22■□□□□ 0.83
CHPT1-207ENST00000552213 FGD6Q6ZV73 1430 aa20.22■□□□□ 0.83
CHPT1-207ENST00000552213 RSPH4AQ5TD94 716 aa20.21■□□□□ 0.83
CHPT1-207ENST00000552213 ZFYVE16Q7Z3T8 1539 aa20.2■□□□□ 0.82
CHPT1-207ENST00000552213 YEATS2Q9ULM3 1422 aa20.19■□□□□ 0.82
CHPT1-207ENST00000552213 MBD5Q9P267 1494 aa20.19■□□□□ 0.82
CHPT1-207ENST00000552213 KDM5CP41229 1560 aa20.19■□□□□ 0.82
CHPT1-207ENST00000552213 FAM50AQ14320 339 aaKnown RBP20.18■□□□□ 0.82
CHPT1-207ENST00000552213 MLH3Q9UHC1 1453 aa20.18■□□□□ 0.82
CHPT1-207ENST00000552213 TSPY4P0CV99 314 aa20.17■□□□□ 0.82
CHPT1-207ENST00000552213 TSPY10P0CW01 314 aa20.17■□□□□ 0.82
CHPT1-207ENST00000552213 ARID4BQ4LE39 1312 aaPredicted RBP20.17■□□□□ 0.82
CHPT1-207ENST00000552213 CCDC141Q6ZP82 1450 aa20.17■□□□□ 0.82
CHPT1-207ENST00000552213 ARHGEF40Q8TER5 1519 aa20.16■□□□□ 0.82
CHPT1-207ENST00000552213 HECW2Q9P2P5 1572 aa20.16■□□□□ 0.82
CHPT1-207ENST00000552213 PTPN23Q9H3S7 1636 aa20.15■□□□□ 0.82
CHPT1-207ENST00000552213 ATP10AO60312 1499 aa20.13■□□□□ 0.81
CHPT1-207ENST00000552213 TCOF1Q13428 1488 aaKnown RBP20.12■□□□□ 0.81
CHPT1-207ENST00000552213 ARHGEF5Q12774 1597 aa20.12■□□□□ 0.81
CHPT1-207ENST00000552213 C9orf84Q5VXU9 1444 aa20.1■□□□□ 0.81
CHPT1-207ENST00000552213 ATP7AQ04656 1500 aa20.1■□□□□ 0.81
CHPT1-207ENST00000552213 RTEL1-TNFRSF6BF6WH68 1400 aa20.09■□□□□ 0.81
CHPT1-207ENST00000552213 ABCC5O15440 1437 aa20.07■□□□□ 0.8
CHPT1-207ENST00000552213 DIP2CQ9Y2E4 1556 aa20.07■□□□□ 0.8
CHPT1-207ENST00000552213 KIDINS220Q9ULH0 1771 aa20.06■□□□□ 0.8
CHPT1-207ENST00000552213 DAPK1P53355 1430 aa20.06■□□□□ 0.8
CHPT1-207ENST00000552213 INO80Q9ULG1 1556 aaPredicted RBP20.06■□□□□ 0.8
CHPT1-207ENST00000552213 ABCA6Q8N139 1617 aa20.05■□□□□ 0.8
CHPT1-207ENST00000552213 MLECQ14165 292 aa20.05■□□□□ 0.8
CHPT1-207ENST00000552213 CHIC2Q9UKJ5 165 aa20.04■□□□□ 0.8
CHPT1-207ENST00000552213 ITGAEP38570 1179 aa20.03■□□□□ 0.8
CHPT1-207ENST00000552213 KDM4FA0A1W2PPD8 638 aa20.02■□□□□ 0.8
CHPT1-207ENST00000552213 A2MP01023 1474 aa20.02■□□□□ 0.8
CHPT1-207ENST00000552213 DNMT1P26358 1616 aaKnown RBP20.01■□□□□ 0.79
CHPT1-207ENST00000552213 SHANK2Q9UPX8 1470 aa20■□□□□ 0.79
CHPT1-207ENST00000552213 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP20■□□□□ 0.79
CHPT1-207ENST00000552213 RRBP1Q9P2E9 1410 aaKnown RBP20■□□□□ 0.79
CHPT1-207ENST00000552213 MAST1Q9Y2H9 1570 aa20■□□□□ 0.79
CHPT1-207ENST00000552213 RRP7BPQ9NSQ0 103 aa19.99■□□□□ 0.79
CHPT1-207ENST00000552213 REREQ9P2R6 1566 aa19.99■□□□□ 0.79
CHPT1-207ENST00000552213 DHX29Q7Z478 1369 aaKnown RBP19.98■□□□□ 0.79
CHPT1-207ENST00000552213 ANKRD30AQ9BXX3 1397 aa19.97■□□□□ 0.79
CHPT1-207ENST00000552213 AGLP35573 1532 aa19.96■□□□□ 0.79
CHPT1-207ENST00000552213 KIF15Q9NS87 1388 aa19.95■□□□□ 0.79
CHPT1-207ENST00000552213 CROCC2H7BZ55 1655 aa19.94■□□□□ 0.78
CHPT1-207ENST00000552213 ADGBQ8N7X0 1667 aa19.94■□□□□ 0.78
CHPT1-207ENST00000552213 SIGLEC1Q9BZZ2 1709 aa19.94■□□□□ 0.78
CHPT1-207ENST00000552213 KIF3BO15066 747 aa19.94■□□□□ 0.78
CHPT1-207ENST00000552213 ESF1Q9H501 851 aaKnown RBP19.94■□□□□ 0.78
CHPT1-207ENST00000552213 GGT6Q6P531 493 aa19.93■□□□□ 0.78
CHPT1-207ENST00000552213 BCORL1Q5H9F3 1711 aa19.93■□□□□ 0.78
CHPT1-207ENST00000552213 PLXNC1O60486 1568 aa19.92■□□□□ 0.78
CHPT1-207ENST00000552213 PTPRKQ15262 1439 aa19.92■□□□□ 0.78
CHPT1-207ENST00000552213 NCOA1Q15788 1441 aa19.92■□□□□ 0.78
CHPT1-207ENST00000552213 DUOX2Q9NRD8 1548 aa19.9■□□□□ 0.78
CHPT1-207ENST00000552213 ADGRL2O95490 1459 aa19.89■□□□□ 0.77
CHPT1-207ENST00000552213 PHF23Q9BUL5 403 aaPredicted RBP19.88■□□□□ 0.77
CHPT1-207ENST00000552213 ADAMTSL3P82987 1691 aa19.87■□□□□ 0.77
CHPT1-207ENST00000552213 PLPPR3Q6T4P5 718 aa19.87■□□□□ 0.77
CHPT1-207ENST00000552213 ROCK1Q13464 1354 aa19.86■□□□□ 0.77
CHPT1-207ENST00000552213 MADDQ8WXG6 1647 aa19.86■□□□□ 0.77
CHPT1-207ENST00000552213 ERBINQ96RT1 1412 aa19.85■□□□□ 0.77
CHPT1-207ENST00000552213 PPP6R1Q9UPN7 881 aa19.84■□□□□ 0.77
CHPT1-207ENST00000552213 PTPRMP28827 1452 aa19.82■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms