RNA–Protein interactions for RNA: ENST00000552213.1

CHPT1-207, Transcript of choline phosphotransferase 1, humanhuman

TSL 3

Gene CHPT1, Length 598 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHPT1-207ENST00000552213 NISCHQ9Y2I1 1504 aa31.36■■■□□ 2.61
CHPT1-207ENST00000552213 CCDC180Q9P1Z9 1646 aa27.72■■■□□ 2.03
CHPT1-207ENST00000552213 ABCC9O60706 1549 aa27.09■■□□□ 1.93
CHPT1-207ENST00000552213 DCAF8L2P0C7V8 631 aa26.31■■□□□ 1.8
CHPT1-207ENST00000552213 ZCCHC6Q5VYS8 1495 aaKnown RBP26.15■■□□□ 1.78
CHPT1-207ENST00000552213 NACADO15069 1562 aa26.08■■□□□ 1.77
CHPT1-207ENST00000552213 RB1CC1Q8TDY2 1594 aa26.07■■□□□ 1.76
CHPT1-207ENST00000552213 MYO15BQ96JP2 1530 aa25.96■■□□□ 1.75
CHPT1-207ENST00000552213 DCAF1Q9Y4B6 1507 aa25.92■■□□□ 1.74
CHPT1-207ENST00000552213 PABPN1Q86U42 306 aaKnown RBP eCLIP25.4■■□□□ 1.66
CHPT1-207ENST00000552213 SCRIBQ14160 1630 aa25.4■■□□□ 1.66
CHPT1-207ENST00000552213 UNC13AQ9UPW8 1703 aa25.36■■□□□ 1.65
CHPT1-207ENST00000552213 BICRAQ9NZM4 1560 aa25.23■■□□□ 1.63
CHPT1-207ENST00000552213 SHROOM4Q9ULL8 1493 aa25.01■■□□□ 1.59
CHPT1-207ENST00000552213 DNAJC5BQ9UF47 199 aa24.69■■□□□ 1.54
CHPT1-207ENST00000552213 EIF4G1Q04637 1599 aaKnown RBP24.59■■□□□ 1.53
CHPT1-207ENST00000552213 CC2D2AQ9P2K1 1620 aa24.44■■□□□ 1.5
CHPT1-207ENST00000552213 CECR2Q9BXF3 1484 aa24.43■■□□□ 1.5
CHPT1-207ENST00000552213 BAZ1AQ9NRL2 1556 aaPredicted RBP24.3■■□□□ 1.48
CHPT1-207ENST00000552213 SMARCA4P51532 1647 aa24.27■■□□□ 1.48
CHPT1-207ENST00000552213 MROH2BQ7Z745 1585 aa24.18■■□□□ 1.46
CHPT1-207ENST00000552213 ATAD2BQ9ULI0 1458 aa24.13■■□□□ 1.45
CHPT1-207ENST00000552213 SMARCA2P51531 1590 aa24.11■■□□□ 1.45
CHPT1-207ENST00000552213 NCAPD3P42695 1498 aa24.08■■□□□ 1.45
CHPT1-207ENST00000552213 RSF1Q96T23 1441 aaPredicted RBP24■■□□□ 1.43
CHPT1-207ENST00000552213 PEG3Q9GZU2 1588 aa23.99■■□□□ 1.43
CHPT1-207ENST00000552213 BAZ1BQ9UIG0 1483 aaKnown RBP23.97■■□□□ 1.43
CHPT1-207ENST00000552213 HMGXB3Q12766 1538 aa23.95■■□□□ 1.43
CHPT1-207ENST00000552213 WIZO95785 1651 aa23.89■■□□□ 1.42
CHPT1-207ENST00000552213 TOP2AP11388 1531 aaKnown RBP23.68■■□□□ 1.38
CHPT1-207ENST00000552213 SUPT5HO00267 1087 aaKnown RBP23.64■■□□□ 1.37
CHPT1-207ENST00000552213 NESP48681 1621 aa23.46■■□□□ 1.35
CHPT1-207ENST00000552213 CADPSQ9ULU8 1353 aa23.43■■□□□ 1.34
CHPT1-207ENST00000552213 CCDC88BA6NC98 1476 aa23.43■■□□□ 1.34
CHPT1-207ENST00000552213 LAMC3Q9Y6N6 1575 aa23.4■■□□□ 1.34
CHPT1-207ENST00000552213 ERCC6Q03468 1493 aa23.36■■□□□ 1.33
CHPT1-207ENST00000552213 PDS5BQ9NTI5 1447 aa23.31■■□□□ 1.32
CHPT1-207ENST00000552213 CFTRP13569 1480 aa23.3■■□□□ 1.32
CHPT1-207ENST00000552213 FANCD2Q9BXW9 1451 aa23.16■■□□□ 1.3
CHPT1-207ENST00000552213 CEP164Q9UPV0 1460 aa23.11■■□□□ 1.29
CHPT1-207ENST00000552213 KIF21AQ7Z4S6 1674 aa23.11■■□□□ 1.29
CHPT1-207ENST00000552213 MRC2Q9UBG0 1479 aa23.03■■□□□ 1.28
CHPT1-207ENST00000552213 PRDM2Q13029 1718 aa23■■□□□ 1.27
CHPT1-207ENST00000552213 THOC2Q8NI27 1593 aaKnown RBP23■■□□□ 1.27
CHPT1-207ENST00000552213 CUX2O14529 1486 aa22.98■■□□□ 1.27
CHPT1-207ENST00000552213 WDR62O43379 1518 aa22.9■■□□□ 1.26
CHPT1-207ENST00000552213 URB2Q14146 1524 aaKnown RBP22.88■■□□□ 1.25
CHPT1-207ENST00000552213 ABCC8Q09428 1581 aa22.8■■□□□ 1.24
CHPT1-207ENST00000552213 TOPBP1Q92547 1522 aa22.78■■□□□ 1.24
CHPT1-207ENST00000552213 DNMBPQ6XZF7 1577 aa22.76■■□□□ 1.23
CHPT1-207ENST00000552213 CUX1P39880 1505 aa22.67■■□□□ 1.22
CHPT1-207ENST00000552213 WRNQ14191 1432 aaPredicted RBP eCLIP22.65■■□□□ 1.22
CHPT1-207ENST00000552213 IFT140Q96RY7 1462 aa22.61■■□□□ 1.21
CHPT1-207ENST00000552213 POLA1P09884 1462 aaPredicted RBP22.6■■□□□ 1.21
CHPT1-207ENST00000552213 FGD5Q6ZNL6 1462 aa22.59■■□□□ 1.21
CHPT1-207ENST00000552213 SOGA1O94964 1423 aa22.57■■□□□ 1.2
CHPT1-207ENST00000552213 RAD54L2Q9Y4B4 1467 aa22.53■■□□□ 1.2
CHPT1-207ENST00000552213 SYNJ1O43426 1573 aa22.51■■□□□ 1.19
CHPT1-207ENST00000552213 TOP2BQ02880 1626 aa22.5■■□□□ 1.19
CHPT1-207ENST00000552213 ZNF608Q9ULD9 1512 aaPredicted RBP22.49■■□□□ 1.19
CHPT1-207ENST00000552213 CHIC1Q5VXU3 224 aa22.49■■□□□ 1.19
CHPT1-207ENST00000552213 TARBP1Q13395 1621 aaKnown RBP22.46■■□□□ 1.19
CHPT1-207ENST00000552213 BIVM-ERCC5R4GMW8 1640 aa22.46■■□□□ 1.19
CHPT1-207ENST00000552213 TDRD9Q8NDG6 1382 aaKnown RBP22.43■■□□□ 1.18
CHPT1-207ENST00000552213 AQRO60306 1485 aaKnown RBP eCLIP22.41■■□□□ 1.18
CHPT1-207ENST00000552213 EIF4G3O43432 1585 aaKnown RBP22.37■■□□□ 1.17
CHPT1-207ENST00000552213 ABCA10Q8WWZ4 1543 aa22.36■■□□□ 1.17
CHPT1-207ENST00000552213 TRIM41Q8WV44 630 aa22.31■■□□□ 1.16
CHPT1-207ENST00000552213 WDR97A6NE52 1622 aa22.3■■□□□ 1.16
CHPT1-207ENST00000552213 GAPVD1Q14C86 1478 aa22.28■■□□□ 1.16
CHPT1-207ENST00000552213 AEBP2Q6ZN18 517 aaPredicted RBP22.28■■□□□ 1.16
CHPT1-207ENST00000552213 GRIN2BQ13224 1484 aa22.26■■□□□ 1.15
CHPT1-207ENST00000552213 FBLN2P98095 1184 aa22.21■■□□□ 1.15
CHPT1-207ENST00000552213 ABCA5Q8WWZ7 1642 aa22.2■■□□□ 1.15
CHPT1-207ENST00000552213 SNAPC4Q5SXM2 1469 aa22.2■■□□□ 1.14
CHPT1-207ENST00000552213 KIF27Q86VH2 1401 aa22.17■■□□□ 1.14
CHPT1-207ENST00000552213 MAGI1Q96QZ7 1491 aaPredicted RBP22.15■■□□□ 1.14
CHPT1-207ENST00000552213 OSCARQ8IYS5 282 aa22.15■■□□□ 1.14
CHPT1-207ENST00000552213 CHMP7Q8WUX9 453 aaPredicted RBP22.15■■□□□ 1.14
CHPT1-207ENST00000552213 PBRM1Q86U86 1689 aa22.12■■□□□ 1.13
CHPT1-207ENST00000552213 DNAJC5Q9H3Z4 198 aa22.12■■□□□ 1.13
CHPT1-207ENST00000552213 ERICH3Q5RHP9 1530 aa22.09■■□□□ 1.13
CHPT1-207ENST00000552213 SYNJ2O15056 1496 aa22.08■■□□□ 1.12
CHPT1-207ENST00000552213 IGF1RP08069 1367 aa22.04■■□□□ 1.12
CHPT1-207ENST00000552213 FHAD1B1AJZ9 1412 aa22.04■■□□□ 1.12
CHPT1-207ENST00000552213 CHD1O14646 1710 aa22.01■■□□□ 1.11
CHPT1-207ENST00000552213 ADAMTS12P58397 1594 aa22■■□□□ 1.11
CHPT1-207ENST00000552213 RUSC2Q8N2Y8 1516 aa21.98■■□□□ 1.11
CHPT1-207ENST00000552213 GRIN2AQ12879 1464 aa21.95■■□□□ 1.1
CHPT1-207ENST00000552213 CARMIL1Q5VZK9 1371 aa21.93■■□□□ 1.1
CHPT1-207ENST00000552213 CUL7Q14999 1698 aa21.9■■□□□ 1.1
CHPT1-207ENST00000552213 FAM9AQ8IZU1 332 aaPredicted RBP21.87■■□□□ 1.09
CHPT1-207ENST00000552213 CSRNP3Q8WYN3 585 aa21.85■■□□□ 1.09
CHPT1-207ENST00000552213 EEA1Q15075 1411 aa21.85■■□□□ 1.09
CHPT1-207ENST00000552213 NUP160Q12769 1436 aa21.83■■□□□ 1.09
CHPT1-207ENST00000552213 CLASP1Q7Z460 1538 aa21.8■■□□□ 1.08
CHPT1-207ENST00000552213 CEP170Q5SW79 1584 aa21.8■■□□□ 1.08
CHPT1-207ENST00000552213 RAPGEF2Q9Y4G8 1499 aa21.8■■□□□ 1.08
CHPT1-207ENST00000552213 PRXQ9BXM0 1461 aa21.74■■□□□ 1.07
CHPT1-207ENST00000552213 ARHGEF11O15085 1522 aa21.71■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms