RNA–Protein interactions for RNA: ENST00000550715.5

LETMD1-225, Transcript of LETM1 domain containing 1, humanhuman

TSL 2

Gene LETMD1, Length 907 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETMD1-225ENST00000550715 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP14.36□□□□□ -0.11
LETMD1-225ENST00000550715 ZFP91Q96JP5 570 aaPredicted RBP14.36□□□□□ -0.11
LETMD1-225ENST00000550715 SOCS7O14512 581 aa14.35□□□□□ -0.11
LETMD1-225ENST00000550715 ADGRL1O94910 1474 aa14.35□□□□□ -0.11
LETMD1-225ENST00000550715 CEP170Q5SW79 1584 aa14.32□□□□□ -0.12
LETMD1-225ENST00000550715 NKX1-1Q15270 411 aaPredicted RBP14.32□□□□□ -0.12
LETMD1-225ENST00000550715 STK24Q9Y6E0 443 aa14.32□□□□□ -0.12
LETMD1-225ENST00000550715 CCDC61Q9Y6R9 512 aa14.32□□□□□ -0.12
LETMD1-225ENST00000550715 BCL11BQ9C0K0 894 aaPredicted RBP14.31□□□□□ -0.12
LETMD1-225ENST00000550715 PAK3O75914 559 aaPredicted RBP14.29□□□□□ -0.12
LETMD1-225ENST00000550715 VSIG10Q8N0Z9 540 aa14.29□□□□□ -0.12
LETMD1-225ENST00000550715 TSHZ2Q9NRE2 1034 aa14.29□□□□□ -0.12
LETMD1-225ENST00000550715 FGD5Q6ZNL6 1462 aa14.29□□□□□ -0.12
LETMD1-225ENST00000550715 WDR97A6NE52 1622 aa14.28□□□□□ -0.12
LETMD1-225ENST00000550715 PCDHB8Q9UN66 801 aa14.28□□□□□ -0.12
LETMD1-225ENST00000550715 PCDHB13Q9Y5F0 798 aa14.28□□□□□ -0.12
LETMD1-225ENST00000550715 SGIP1Q9BQI5 828 aa14.27□□□□□ -0.13
LETMD1-225ENST00000550715 ZNF467Q7Z7K2 595 aaPredicted RBP14.26□□□□□ -0.13
LETMD1-225ENST00000550715 TSPOAP1O95153 1857 aa14.26□□□□□ -0.13
LETMD1-225ENST00000550715 DIP2BQ9P265 1576 aa14.26□□□□□ -0.13
LETMD1-225ENST00000550715 KDM2AQ9Y2K7 1162 aa14.25□□□□□ -0.13
LETMD1-225ENST00000550715 GRIN2AQ12879 1464 aa14.2□□□□□ -0.14
LETMD1-225ENST00000550715 GTPBP6O43824 516 aaPredicted RBP14.2□□□□□ -0.14
LETMD1-225ENST00000550715 NUP160Q12769 1436 aa14.2□□□□□ -0.14
LETMD1-225ENST00000550715 PRG4Q92954 1404 aaPredicted RBP14.2□□□□□ -0.14
LETMD1-225ENST00000550715 MAPKBP1O60336 1514 aa14.2□□□□□ -0.14
LETMD1-225ENST00000550715 PDAP1Q13442 181 aaKnown RBP14.19□□□□□ -0.14
LETMD1-225ENST00000550715 SHROOM2Q13796 1616 aa14.19□□□□□ -0.14
LETMD1-225ENST00000550715 PBRM1Q86U86 1689 aa14.18□□□□□ -0.14
LETMD1-225ENST00000550715 CD44P16070 742 aaKnown RBP14.18□□□□□ -0.14
LETMD1-225ENST00000550715 ZRANB1Q9UGI0 708 aa14.18□□□□□ -0.14
LETMD1-225ENST00000550715 MAP3K13O43283 966 aa14.17□□□□□ -0.14
LETMD1-225ENST00000550715 JPH4Q96JJ6 628 aa14.17□□□□□ -0.14
LETMD1-225ENST00000550715 DISP3Q9P2K9 1392 aa14.17□□□□□ -0.14
LETMD1-225ENST00000550715 ZNF579Q8NAF0 562 aaKnown RBP14.16□□□□□ -0.14
LETMD1-225ENST00000550715 IFNL1Q8IU54 200 aa14.15□□□□□ -0.14
LETMD1-225ENST00000550715 CUX1P39880 1505 aa14.15□□□□□ -0.14
LETMD1-225ENST00000550715 PSEN1P49768 467 aa14.14□□□□□ -0.15
LETMD1-225ENST00000550715 KIF12Q96FN5 646 aa14.14□□□□□ -0.15
LETMD1-225ENST00000550715 PHF12Q96QT6 1004 aa14.14□□□□□ -0.15
LETMD1-225ENST00000550715 COL17A1Q9UMD9 1497 aaPredicted RBP14.13□□□□□ -0.15
LETMD1-225ENST00000550715 ADCY10Q96PN6 1610 aa14.09□□□□□ -0.15
LETMD1-225ENST00000550715 ABCA5Q8WWZ7 1642 aa14.06□□□□□ -0.16
LETMD1-225ENST00000550715 ABCA10Q8WWZ4 1543 aa14.05□□□□□ -0.16
LETMD1-225ENST00000550715 RYDENQ9NUL5 291 aaKnown RBP14.03□□□□□ -0.16
LETMD1-225ENST00000550715 PPRC1Q5VV67 1664 aaKnown RBP14.02□□□□□ -0.16
LETMD1-225ENST00000550715 BCANQ96GW7 911 aa14.02□□□□□ -0.17
LETMD1-225ENST00000550715 ADAMTS12P58397 1594 aa14.01□□□□□ -0.17
LETMD1-225ENST00000550715 FHAD1B1AJZ9 1412 aa14.01□□□□□ -0.17
LETMD1-225ENST00000550715 C19orf67A6NJJ6 358 aa14.01□□□□□ -0.17
LETMD1-225ENST00000550715 CABP2Q9NPB3 220 aa14□□□□□ -0.17
LETMD1-225ENST00000550715 CERKQ8TCT0 537 aa13.98□□□□□ -0.17
LETMD1-225ENST00000550715 MFRPQ9BY79 579 aa13.97□□□□□ -0.17
LETMD1-225ENST00000550715 EFCAB3Q8N7B9 438 aa13.96□□□□□ -0.17
LETMD1-225ENST00000550715 MS4A3Q96HJ5 214 aa13.96□□□□□ -0.17
LETMD1-225ENST00000550715 TOP2BQ02880 1626 aa13.96□□□□□ -0.17
LETMD1-225ENST00000550715 TRPC6Q9Y210 931 aa13.94□□□□□ -0.18
LETMD1-225ENST00000550715 TTBK1Q5TCY1 1321 aaPredicted RBP13.93□□□□□ -0.18
LETMD1-225ENST00000550715 ASXL2Q76L83 1435 aa13.93□□□□□ -0.18
LETMD1-225ENST00000550715 GLI2P10070 1586 aa13.92□□□□□ -0.18
LETMD1-225ENST00000550715 TMEM106CQ9BVX2 250 aa13.89□□□□□ -0.19
LETMD1-225ENST00000550715 PHF8Q9UPP1 1060 aa13.89□□□□□ -0.19
LETMD1-225ENST00000550715 PLB1Q6P1J6 1458 aa13.88□□□□□ -0.19
LETMD1-225ENST00000550715 CADPS2Q86UW7 1296 aa13.86□□□□□ -0.19
LETMD1-225ENST00000550715 PTPRGP23470 1445 aa13.86□□□□□ -0.19
LETMD1-225ENST00000550715 HAX1O00165 279 aa13.85□□□□□ -0.19
LETMD1-225ENST00000550715 HSPA2P54652 639 aa13.85□□□□□ -0.19
LETMD1-225ENST00000550715 NLRP6P59044 892 aa13.85□□□□□ -0.19
LETMD1-225ENST00000550715 FBXO22Q8NEZ5 403 aa13.85□□□□□ -0.19
LETMD1-225ENST00000550715 PTPRMP28827 1452 aa13.85□□□□□ -0.19
LETMD1-225ENST00000550715 WRNQ14191 1432 aaPredicted RBP eCLIP13.84□□□□□ -0.19
LETMD1-225ENST00000550715 SOX12O15370 315 aa13.84□□□□□ -0.19
LETMD1-225ENST00000550715 PPP1R37O75864 691 aa13.84□□□□□ -0.19
LETMD1-225ENST00000550715 RUSC2Q8N2Y8 1516 aa13.84□□□□□ -0.19
LETMD1-225ENST00000550715 ABCC2Q92887 1545 aa13.84□□□□□ -0.19
LETMD1-225ENST00000550715 ERICH3Q5RHP9 1530 aa13.82□□□□□ -0.2
LETMD1-225ENST00000550715 GOLGA2Q08379 1002 aa13.82□□□□□ -0.2
LETMD1-225ENST00000550715 TEX14Q8IWB6 1497 aa13.81□□□□□ -0.2
LETMD1-225ENST00000550715 EPRSP07814 1512 aaKnown RBP13.81□□□□□ -0.2
LETMD1-225ENST00000550715 SPATA31D1Q6ZQQ2 1576 aa13.81□□□□□ -0.2
LETMD1-225ENST00000550715 MAP3K4Q9Y6R4 1608 aa13.8□□□□□ -0.2
LETMD1-225ENST00000550715 EVX2Q03828 476 aa13.8□□□□□ -0.2
LETMD1-225ENST00000550715 PCF11O94913 1555 aaKnown RBP13.79□□□□□ -0.2
LETMD1-225ENST00000550715 GALR2O43603 387 aaPredicted RBP13.79□□□□□ -0.2
LETMD1-225ENST00000550715 KIF21BO75037 1637 aa13.78□□□□□ -0.2
LETMD1-225ENST00000550715 NBR1Q14596 966 aa13.76□□□□□ -0.21
LETMD1-225ENST00000550715 MS4A4AQ96JQ5 239 aa13.76□□□□□ -0.21
LETMD1-225ENST00000550715 KIAA0586Q9BVV6 1533 aa13.75□□□□□ -0.21
LETMD1-225ENST00000550715 TTLL13PA6NNM8 815 aa13.75□□□□□ -0.21
LETMD1-225ENST00000550715 TIE1P35590 1138 aa13.75□□□□□ -0.21
LETMD1-225ENST00000550715 MKRN3Q13064 507 aaKnown RBP13.74□□□□□ -0.21
LETMD1-225ENST00000550715 BMP2KQ9NSY1 1161 aaPredicted RBP13.74□□□□□ -0.21
LETMD1-225ENST00000550715 CUL7Q14999 1698 aa13.74□□□□□ -0.21
LETMD1-225ENST00000550715 ADAMTSL3P82987 1691 aa13.73□□□□□ -0.21
LETMD1-225ENST00000550715 TNIKQ9UKE5 1360 aa13.72□□□□□ -0.21
LETMD1-225ENST00000550715 PRKCSHP14314 528 aaPredicted RBP13.72□□□□□ -0.21
LETMD1-225ENST00000550715 UHRF1BP1LA0JNW5 1464 aa13.69□□□□□ -0.22
LETMD1-225ENST00000550715 WDR70Q9NW82 654 aa13.69□□□□□ -0.22
LETMD1-225ENST00000550715 UACAQ9BZF9 1416 aa13.69□□□□□ -0.22
LETMD1-225ENST00000550715 TRIM35Q9UPQ4 493 aa13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 62.8 ms