RNA–Protein interactions for RNA: ENST00000550375.1

BRF1-217, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 3

Gene BRF1, Length 1,362 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-217ENST00000550375 PPARGC1BQ86YN6 1023 aaKnown RBP26.81■■□□□ 1.88
BRF1-217ENST00000550375 CFAP74Q9C0B2 1584 aa26.8■■□□□ 1.88
BRF1-217ENST00000550375 ARAP3Q8WWN8 1544 aa26.79■■□□□ 1.88
BRF1-217ENST00000550375 NEO1Q92859 1461 aa26.79■■□□□ 1.88
BRF1-217ENST00000550375 KDM6BO15054 1643 aa26.78■■□□□ 1.88
BRF1-217ENST00000550375 EFCAB2Q5VUJ9 269 aa26.78■■□□□ 1.88
BRF1-217ENST00000550375 ITSN2Q9NZM3 1697 aa26.77■■□□□ 1.88
BRF1-217ENST00000550375 AKNAQ7Z591 1439 aa26.76■■□□□ 1.87
BRF1-217ENST00000550375 CFDP1Q9UEE9 299 aaPredicted RBP26.74■■□□□ 1.87
BRF1-217ENST00000550375 ZNF777Q9ULD5 760 aaPredicted RBP26.74■■□□□ 1.87
BRF1-217ENST00000550375 COL17A1Q9UMD9 1497 aaPredicted RBP26.72■■□□□ 1.87
BRF1-217ENST00000550375 PHLDB1Q86UU1 1377 aa26.72■■□□□ 1.87
BRF1-217ENST00000550375 ADGRL1O94910 1474 aa26.69■■□□□ 1.86
BRF1-217ENST00000550375 SAMD9LQ8IVG5 1584 aa26.67■■□□□ 1.86
BRF1-217ENST00000550375 MYOM3Q5VTT5 1437 aa26.67■■□□□ 1.86
BRF1-217ENST00000550375 SCAPERQ9BY12 1400 aa26.66■■□□□ 1.86
BRF1-217ENST00000550375 RAPGEF3O95398 923 aa26.64■■□□□ 1.86
BRF1-217ENST00000550375 ZNF644Q9H582 1327 aaPredicted RBP26.63■■□□□ 1.85
BRF1-217ENST00000550375 DENND4BO75064 1496 aaPredicted RBP26.63■■□□□ 1.85
BRF1-217ENST00000550375 ABCC1P33527 1531 aa26.62■■□□□ 1.85
BRF1-217ENST00000550375 RICTORQ6R327 1708 aa26.6■■□□□ 1.85
BRF1-217ENST00000550375 ARHGEF12Q9NZN5 1544 aa26.59■■□□□ 1.85
BRF1-217ENST00000550375 FRMPD1Q5SYB0 1578 aa26.59■■□□□ 1.85
BRF1-217ENST00000550375 SYCP2Q9BX26 1530 aa26.58■■□□□ 1.85
BRF1-217ENST00000550375 CAMSAP2Q08AD1 1489 aa26.58■■□□□ 1.85
BRF1-217ENST00000550375 HNRNPMP52272 730 aaKnown RBP eCLIP26.58■■□□□ 1.84
BRF1-217ENST00000550375 MIA2Q96PC5 1412 aa26.57■■□□□ 1.84
BRF1-217ENST00000550375 PLEKHH2Q8IVE3 1493 aa26.56■■□□□ 1.84
BRF1-217ENST00000550375 POGZQ7Z3K3 1410 aa26.56■■□□□ 1.84
BRF1-217ENST00000550375 FGD6Q6ZV73 1430 aa26.55■■□□□ 1.84
BRF1-217ENST00000550375 PTPN23Q9H3S7 1636 aa26.53■■□□□ 1.84
BRF1-217ENST00000550375 TRAPPC8Q9Y2L5 1435 aa26.53■■□□□ 1.84
BRF1-217ENST00000550375 AFAP1Q8N556 730 aa26.53■■□□□ 1.84
BRF1-217ENST00000550375 KIAA1107Q9UPP5 1409 aa26.52■■□□□ 1.84
BRF1-217ENST00000550375 ZNF518AQ6AHZ1 1483 aa26.51■■□□□ 1.83
BRF1-217ENST00000550375 KDM4FA0A1W2PPD8 638 aa26.48■■□□□ 1.83
BRF1-217ENST00000550375 MBD5Q9P267 1494 aa26.47■■□□□ 1.83
BRF1-217ENST00000550375 KDM5CP41229 1560 aa26.46■■□□□ 1.83
BRF1-217ENST00000550375 ZMYM4Q5VZL5 1548 aa26.46■■□□□ 1.83
BRF1-217ENST00000550375 MYT1LQ9UL68 1186 aa26.46■■□□□ 1.83
BRF1-217ENST00000550375 TCOF1Q13428 1488 aaKnown RBP26.45■■□□□ 1.82
BRF1-217ENST00000550375 FAM50AQ14320 339 aaKnown RBP26.45■■□□□ 1.82
BRF1-217ENST00000550375 ARHGEF5Q12774 1597 aa26.42■■□□□ 1.82
BRF1-217ENST00000550375 HECW2Q9P2P5 1572 aa26.42■■□□□ 1.82
BRF1-217ENST00000550375 CCDC141Q6ZP82 1450 aa26.41■■□□□ 1.82
BRF1-217ENST00000550375 ZFYVE16Q7Z3T8 1539 aa26.4■■□□□ 1.82
BRF1-217ENST00000550375 SPAG9O60271 1321 aaKnown RBP26.39■■□□□ 1.82
BRF1-217ENST00000550375 YEATS2Q9ULM3 1422 aa26.39■■□□□ 1.82
BRF1-217ENST00000550375 RSPH4AQ5TD94 716 aa26.38■■□□□ 1.81
BRF1-217ENST00000550375 MAGI2Q86UL8 1455 aa26.38■■□□□ 1.81
BRF1-217ENST00000550375 MLH3Q9UHC1 1453 aa26.37■■□□□ 1.81
BRF1-217ENST00000550375 KIDINS220Q9ULH0 1771 aa26.37■■□□□ 1.81
BRF1-217ENST00000550375 ARHGEF40Q8TER5 1519 aa26.36■■□□□ 1.81
BRF1-217ENST00000550375 DNMT1P26358 1616 aaKnown RBP26.34■■□□□ 1.81
BRF1-217ENST00000550375 ATP7AQ04656 1500 aa26.34■■□□□ 1.81
BRF1-217ENST00000550375 INO80Q9ULG1 1556 aaPredicted RBP26.34■■□□□ 1.81
BRF1-217ENST00000550375 TSPY4P0CV99 314 aa26.33■■□□□ 1.81
BRF1-217ENST00000550375 TSPY10P0CW01 314 aa26.33■■□□□ 1.81
BRF1-217ENST00000550375 CROCC2H7BZ55 1655 aa26.33■■□□□ 1.81
BRF1-217ENST00000550375 ABCC5O15440 1437 aa26.33■■□□□ 1.8
BRF1-217ENST00000550375 DAPK1P53355 1430 aa26.33■■□□□ 1.8
BRF1-217ENST00000550375 RRBP1Q9P2E9 1410 aaKnown RBP26.33■■□□□ 1.8
BRF1-217ENST00000550375 ABCA6Q8N139 1617 aa26.32■■□□□ 1.8
BRF1-217ENST00000550375 DIP2CQ9Y2E4 1556 aa26.31■■□□□ 1.8
BRF1-217ENST00000550375 RTEL1-TNFRSF6BF6WH68 1400 aa26.28■■□□□ 1.8
BRF1-217ENST00000550375 C9orf84Q5VXU9 1444 aa26.28■■□□□ 1.8
BRF1-217ENST00000550375 ATP10AO60312 1499 aa26.27■■□□□ 1.8
BRF1-217ENST00000550375 MAST1Q9Y2H9 1570 aa26.27■■□□□ 1.8
BRF1-217ENST00000550375 ITGAEP38570 1179 aa26.27■■□□□ 1.8
BRF1-217ENST00000550375 CHIC2Q9UKJ5 165 aa26.25■■□□□ 1.79
BRF1-217ENST00000550375 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP26.25■■□□□ 1.795e-7■■■■■ 29.7
BRF1-217ENST00000550375 SHANK2Q9UPX8 1470 aa26.24■■□□□ 1.79
BRF1-217ENST00000550375 SIGLEC1Q9BZZ2 1709 aa26.24■■□□□ 1.79
BRF1-217ENST00000550375 ADGBQ8N7X0 1667 aa26.23■■□□□ 1.79
BRF1-217ENST00000550375 ARID4BQ4LE39 1312 aaPredicted RBP26.22■■□□□ 1.79
BRF1-217ENST00000550375 PTPRKQ15262 1439 aa26.19■■□□□ 1.78
BRF1-217ENST00000550375 PLXNC1O60486 1568 aa26.18■■□□□ 1.78
BRF1-217ENST00000550375 A2MP01023 1474 aa26.17■■□□□ 1.78
BRF1-217ENST00000550375 REREQ9P2R6 1566 aa26.17■■□□□ 1.78
BRF1-217ENST00000550375 RRP7BPQ9NSQ0 103 aa26.15■■□□□ 1.78
BRF1-217ENST00000550375 ANKRD30AQ9BXX3 1397 aa26.14■■□□□ 1.77
BRF1-217ENST00000550375 ADGRL2O95490 1459 aa26.11■■□□□ 1.77
BRF1-217ENST00000550375 DHX29Q7Z478 1369 aaKnown RBP26.11■■□□□ 1.77
BRF1-217ENST00000550375 KIF15Q9NS87 1388 aa26.11■■□□□ 1.77
BRF1-217ENST00000550375 MLECQ14165 292 aa26.11■■□□□ 1.77
BRF1-217ENST00000550375 NCOA1Q15788 1441 aa26.11■■□□□ 1.77
BRF1-217ENST00000550375 BCORL1Q5H9F3 1711 aa26.09■■□□□ 1.77
BRF1-217ENST00000550375 AGLP35573 1532 aa26.08■■□□□ 1.77
BRF1-217ENST00000550375 DUOX2Q9NRD8 1548 aa26.08■■□□□ 1.77
BRF1-217ENST00000550375 ROCK1Q13464 1354 aa26.04■■□□□ 1.76
BRF1-217ENST00000550375 KIF3BO15066 747 aa26.03■■□□□ 1.76
BRF1-217ENST00000550375 ADAMTSL3P82987 1691 aa26■■□□□ 1.75
BRF1-217ENST00000550375 GGT6Q6P531 493 aa26■■□□□ 1.75
BRF1-217ENST00000550375 EIF2AK4Q9P2K8 1649 aaKnown RBP26■■□□□ 1.75
BRF1-217ENST00000550375 ERBINQ96RT1 1412 aa25.99■■□□□ 1.75
BRF1-217ENST00000550375 MADDQ8WXG6 1647 aa25.98■■□□□ 1.75
BRF1-217ENST00000550375 FER1L4A9Z1Z3 1794 aa25.97■■□□□ 1.75
BRF1-217ENST00000550375 ANKRD50Q9ULJ7 1429 aa25.96■■□□□ 1.75
BRF1-217ENST00000550375 RIMS1Q86UR5 1692 aaKnown RBP25.94■■□□□ 1.74
BRF1-217ENST00000550375 RNF17Q9BXT8 1623 aaKnown RBP25.93■■□□□ 1.74
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms