RNA–Protein interactions for RNA: ENST00000550100.5

LETMD1-221, Transcript of LETM1 domain containing 1, humanhuman

TSL 2

Gene LETMD1, Length 1,480 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETMD1-221ENST00000550100 YEATS2Q9ULM3 1422 aa18.94■□□□□ 0.62
LETMD1-221ENST00000550100 ARHGAP5Q13017 1502 aa18.93■□□□□ 0.62
LETMD1-221ENST00000550100 POGZQ7Z3K3 1410 aa18.93■□□□□ 0.62
LETMD1-221ENST00000550100 AFAP1Q8N556 730 aa18.92■□□□□ 0.62
LETMD1-221ENST00000550100 ARHGEF12Q9NZN5 1544 aa18.91■□□□□ 0.62
LETMD1-221ENST00000550100 ZMYM4Q5VZL5 1548 aa18.91■□□□□ 0.62
LETMD1-221ENST00000550100 CDC42BPAQ5VT25 1732 aa18.91■□□□□ 0.62
LETMD1-221ENST00000550100 SIGLEC1Q9BZZ2 1709 aa18.9■□□□□ 0.62
LETMD1-221ENST00000550100 PREX2Q70Z35 1606 aa18.9■□□□□ 0.62
LETMD1-221ENST00000550100 GPATCH8Q9UKJ3 1502 aaKnown RBP18.89■□□□□ 0.61
LETMD1-221ENST00000550100 ARHGEF40Q8TER5 1519 aa18.88■□□□□ 0.61
LETMD1-221ENST00000550100 TRAPPC8Q9Y2L5 1435 aa18.87■□□□□ 0.61
LETMD1-221ENST00000550100 MTUS2Q5JR59 1369 aa18.87■□□□□ 0.61
LETMD1-221ENST00000550100 VPS8Q8N3P4 1428 aa18.85■□□□□ 0.61
LETMD1-221ENST00000550100 ZFYVE16Q7Z3T8 1539 aa18.85■□□□□ 0.61
LETMD1-221ENST00000550100 ZNF777Q9ULD5 760 aaPredicted RBP18.84■□□□□ 0.61
LETMD1-221ENST00000550100 ARID4BQ4LE39 1312 aaPredicted RBP18.84■□□□□ 0.61
LETMD1-221ENST00000550100 ADAMTSL3P82987 1691 aa18.84■□□□□ 0.61
LETMD1-221ENST00000550100 MAGI2Q86UL8 1455 aa18.84■□□□□ 0.61
LETMD1-221ENST00000550100 ABCC1P33527 1531 aa18.83■□□□□ 0.61
LETMD1-221ENST00000550100 SAMD9LQ8IVG5 1584 aa18.82■□□□□ 0.6
LETMD1-221ENST00000550100 HNRNPMP52272 730 aaKnown RBP eCLIP18.82■□□□□ 0.6
LETMD1-221ENST00000550100 KDM5CP41229 1560 aa18.82■□□□□ 0.6
LETMD1-221ENST00000550100 ZNF644Q9H582 1327 aaPredicted RBP18.82■□□□□ 0.6
LETMD1-221ENST00000550100 BCORL1Q5H9F3 1711 aa18.81■□□□□ 0.6
LETMD1-221ENST00000550100 ZNF518AQ6AHZ1 1483 aa18.81■□□□□ 0.6
LETMD1-221ENST00000550100 CCNB3Q8WWL7 1395 aa18.8■□□□□ 0.6
LETMD1-221ENST00000550100 KANK4Q5T7N3 995 aaPredicted RBP18.8■□□□□ 0.6
LETMD1-221ENST00000550100 CFDP1Q9UEE9 299 aaPredicted RBP18.8■□□□□ 0.6
LETMD1-221ENST00000550100 ITSN2Q9NZM3 1697 aa18.79■□□□□ 0.6
LETMD1-221ENST00000550100 EHBP1L1Q8N3D4 1523 aa18.79■□□□□ 0.6
LETMD1-221ENST00000550100 TIAM1Q13009 1591 aa18.79■□□□□ 0.6
LETMD1-221ENST00000550100 ATP10AO60312 1499 aa18.78■□□□□ 0.6
LETMD1-221ENST00000550100 MADDQ8WXG6 1647 aa18.76■□□□□ 0.59
LETMD1-221ENST00000550100 MLECQ14165 292 aa18.76■□□□□ 0.59
LETMD1-221ENST00000550100 PTPRMP28827 1452 aa18.75■□□□□ 0.59
LETMD1-221ENST00000550100 NCOA2Q15596 1464 aa18.75■□□□□ 0.59
LETMD1-221ENST00000550100 MLH3Q9UHC1 1453 aa18.75■□□□□ 0.59
LETMD1-221ENST00000550100 SYCP2Q9BX26 1530 aa18.75■□□□□ 0.59
LETMD1-221ENST00000550100 LRRC9Q6ZRR7 1453 aa18.74■□□□□ 0.59
LETMD1-221ENST00000550100 HECW2Q9P2P5 1572 aa18.74■□□□□ 0.59
LETMD1-221ENST00000550100 DIP2CQ9Y2E4 1556 aa18.74■□□□□ 0.59
LETMD1-221ENST00000550100 KIDINS220Q9ULH0 1771 aa18.73■□□□□ 0.59
LETMD1-221ENST00000550100 ABCA6Q8N139 1617 aa18.73■□□□□ 0.59
LETMD1-221ENST00000550100 C9orf84Q5VXU9 1444 aa18.73■□□□□ 0.59
LETMD1-221ENST00000550100 MYT1LQ9UL68 1186 aa18.73■□□□□ 0.59
LETMD1-221ENST00000550100 KIAA1107Q9UPP5 1409 aa18.72■□□□□ 0.59
LETMD1-221ENST00000550100 MBD5Q9P267 1494 aa18.7■□□□□ 0.58
LETMD1-221ENST00000550100 SUPT6HQ7KZ85 1726 aaKnown RBP18.69■□□□□ 0.58
LETMD1-221ENST00000550100 RIMS1Q86UR5 1692 aaKnown RBP18.69■□□□□ 0.58
LETMD1-221ENST00000550100 SPAG9O60271 1321 aaKnown RBP18.68■□□□□ 0.58
LETMD1-221ENST00000550100 MAP3K1Q13233 1512 aa18.68■□□□□ 0.58
LETMD1-221ENST00000550100 PLEKHH2Q8IVE3 1493 aa18.67■□□□□ 0.58
LETMD1-221ENST00000550100 PLPPR3Q6T4P5 718 aa18.66■□□□□ 0.58
LETMD1-221ENST00000550100 REREQ9P2R6 1566 aa18.64■□□□□ 0.57
LETMD1-221ENST00000550100 INO80Q9ULG1 1556 aaPredicted RBP18.62■□□□□ 0.57
LETMD1-221ENST00000550100 CAMSAP2Q08AD1 1489 aa18.62■□□□□ 0.57
LETMD1-221ENST00000550100 CEBPAP49715 358 aaPredicted RBP18.62■□□□□ 0.57
LETMD1-221ENST00000550100 ATP7AQ04656 1500 aa18.62■□□□□ 0.57
LETMD1-221ENST00000550100 FER1L4A9Z1Z3 1794 aa18.61■□□□□ 0.57
LETMD1-221ENST00000550100 AGLP35573 1532 aa18.61■□□□□ 0.57
LETMD1-221ENST00000550100 MYOM3Q5VTT5 1437 aa18.55■□□□□ 0.56
LETMD1-221ENST00000550100 A2MP01023 1474 aa18.55■□□□□ 0.56
LETMD1-221ENST00000550100 LMTK3Q96Q04 1460 aa18.55■□□□□ 0.56
LETMD1-221ENST00000550100 PLXNC1O60486 1568 aa18.54■□□□□ 0.56
LETMD1-221ENST00000550100 APLP2Q06481 763 aa18.54■□□□□ 0.56
LETMD1-221ENST00000550100 RTEL1-TNFRSF6BF6WH68 1400 aa18.54■□□□□ 0.56
LETMD1-221ENST00000550100 CCDC141Q6ZP82 1450 aa18.54■□□□□ 0.56
LETMD1-221ENST00000550100 HSPA2P54652 639 aa18.52■□□□□ 0.55
LETMD1-221ENST00000550100 ARHGEF5Q12774 1597 aa18.52■□□□□ 0.55
LETMD1-221ENST00000550100 MIA2Q96PC5 1412 aa18.51■□□□□ 0.55
LETMD1-221ENST00000550100 RSPH4AQ5TD94 716 aa18.51■□□□□ 0.55
LETMD1-221ENST00000550100 ADGBQ8N7X0 1667 aa18.5■□□□□ 0.55
LETMD1-221ENST00000550100 DHX29Q7Z478 1369 aaKnown RBP18.49■□□□□ 0.55
LETMD1-221ENST00000550100 GGT6Q6P531 493 aa18.48■□□□□ 0.55
LETMD1-221ENST00000550100 C3P01024 1663 aa18.48■□□□□ 0.55
LETMD1-221ENST00000550100 TSPY4P0CV99 314 aa18.46■□□□□ 0.54
LETMD1-221ENST00000550100 TSPY10P0CW01 314 aa18.46■□□□□ 0.54
LETMD1-221ENST00000550100 FGD6Q6ZV73 1430 aa18.45■□□□□ 0.54
LETMD1-221ENST00000550100 ZMYM3Q14202 1370 aa18.44■□□□□ 0.54
LETMD1-221ENST00000550100 PTPN23Q9H3S7 1636 aa18.44■□□□□ 0.54
LETMD1-221ENST00000550100 ABCC5O15440 1437 aa18.44■□□□□ 0.54
LETMD1-221ENST00000550100 KIF3BO15066 747 aa18.44■□□□□ 0.54
LETMD1-221ENST00000550100 PPARGC1BQ86YN6 1023 aaKnown RBP18.44■□□□□ 0.54
LETMD1-221ENST00000550100 ESF1Q9H501 851 aaKnown RBP18.43■□□□□ 0.54
LETMD1-221ENST00000550100 MAST1Q9Y2H9 1570 aa18.42■□□□□ 0.54
LETMD1-221ENST00000550100 CLTCQ00610 1675 aaKnown RBP18.42■□□□□ 0.54
LETMD1-221ENST00000550100 SETD1BQ9UPS6 1966 aaKnown RBP18.42■□□□□ 0.54
LETMD1-221ENST00000550100 CNTLNQ9NXG0 1405 aa18.42■□□□□ 0.54
LETMD1-221ENST00000550100 TCOF1Q13428 1488 aaKnown RBP18.41■□□□□ 0.54
LETMD1-221ENST00000550100 PREX1Q8TCU6 1659 aa18.38■□□□□ 0.53
LETMD1-221ENST00000550100 MROH2AA6NES4 1674 aa18.38■□□□□ 0.53
LETMD1-221ENST00000550100 DAPK1P53355 1430 aa18.37■□□□□ 0.53
LETMD1-221ENST00000550100 RRP7BPQ9NSQ0 103 aa18.36■□□□□ 0.53
LETMD1-221ENST00000550100 CHIC2Q9UKJ5 165 aa18.36■□□□□ 0.53
LETMD1-221ENST00000550100 PPP6R1Q9UPN7 881 aa18.36■□□□□ 0.53
LETMD1-221ENST00000550100 PTPRKQ15262 1439 aa18.35■□□□□ 0.53
LETMD1-221ENST00000550100 CROCC2H7BZ55 1655 aa18.34■□□□□ 0.53
LETMD1-221ENST00000550100 FBXO31Q5XUX0 539 aaPredicted RBP18.34■□□□□ 0.53
LETMD1-221ENST00000550100 DNMT1P26358 1616 aaKnown RBP18.34■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 225.4 ms