RNA–Protein interactions for RNA: ENST00000548473.1

AC007540.1-201, humanhuman

TSL 3 BASIC

Gene AC007540.1, Length 507 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC007540.1-201ENST00000548473 VPS8Q8N3P4 1428 aa19■□□□□ 0.63
AC007540.1-201ENST00000548473 RICTORQ6R327 1708 aa18.96■□□□□ 0.63
AC007540.1-201ENST00000548473 CDC42BPBQ9Y5S2 1711 aa18.95■□□□□ 0.62
AC007540.1-201ENST00000548473 ZNF777Q9ULD5 760 aaPredicted RBP18.95■□□□□ 0.62
AC007540.1-201ENST00000548473 GPATCH8Q9UKJ3 1502 aaKnown RBP18.94■□□□□ 0.62
AC007540.1-201ENST00000548473 PREX2Q70Z35 1606 aa18.93■□□□□ 0.62
AC007540.1-201ENST00000548473 POGZQ7Z3K3 1410 aa18.93■□□□□ 0.62
AC007540.1-201ENST00000548473 AFAP1Q8N556 730 aa18.93■□□□□ 0.62
AC007540.1-201ENST00000548473 CCNB3Q8WWL7 1395 aa18.93■□□□□ 0.62
AC007540.1-201ENST00000548473 CDC42BPAQ5VT25 1732 aa18.91■□□□□ 0.62
AC007540.1-201ENST00000548473 EHBP1L1Q8N3D4 1523 aa18.91■□□□□ 0.62
AC007540.1-201ENST00000548473 CFDP1Q9UEE9 299 aaPredicted RBP18.91■□□□□ 0.62
AC007540.1-201ENST00000548473 ARID4BQ4LE39 1312 aaPredicted RBP18.91■□□□□ 0.62
AC007540.1-201ENST00000548473 YEATS2Q9ULM3 1422 aa18.9■□□□□ 0.62
AC007540.1-201ENST00000548473 ZMYM4Q5VZL5 1548 aa18.9■□□□□ 0.62
AC007540.1-201ENST00000548473 MYT1LQ9UL68 1186 aa18.89■□□□□ 0.61
AC007540.1-201ENST00000548473 TIAM1Q13009 1591 aa18.89■□□□□ 0.61
AC007540.1-201ENST00000548473 MAGI2Q86UL8 1455 aa18.88■□□□□ 0.61
AC007540.1-201ENST00000548473 ARHGEF12Q9NZN5 1544 aa18.88■□□□□ 0.61
AC007540.1-201ENST00000548473 ZNF518AQ6AHZ1 1483 aa18.87■□□□□ 0.61
AC007540.1-201ENST00000548473 ZFYVE16Q7Z3T8 1539 aa18.87■□□□□ 0.61
AC007540.1-201ENST00000548473 ARHGEF40Q8TER5 1519 aa18.86■□□□□ 0.61
AC007540.1-201ENST00000548473 TRAPPC8Q9Y2L5 1435 aa18.86■□□□□ 0.61
AC007540.1-201ENST00000548473 HNRNPMP52272 730 aaKnown RBP eCLIP18.86■□□□□ 0.61
AC007540.1-201ENST00000548473 KANK4Q5T7N3 995 aaPredicted RBP18.86■□□□□ 0.61
AC007540.1-201ENST00000548473 ABCC1P33527 1531 aa18.85■□□□□ 0.61
AC007540.1-201ENST00000548473 APLP2Q06481 763 aa18.85■□□□□ 0.61
AC007540.1-201ENST00000548473 LRRC9Q6ZRR7 1453 aa18.84■□□□□ 0.61
AC007540.1-201ENST00000548473 SAMD9LQ8IVG5 1584 aa18.83■□□□□ 0.6
AC007540.1-201ENST00000548473 NCOA2Q15596 1464 aa18.83■□□□□ 0.6
AC007540.1-201ENST00000548473 ZNF644Q9H582 1327 aaPredicted RBP18.82■□□□□ 0.6
AC007540.1-201ENST00000548473 MAP3K1Q13233 1512 aa18.82■□□□□ 0.6
AC007540.1-201ENST00000548473 SUPT6HQ7KZ85 1726 aaKnown RBP18.81■□□□□ 0.6
AC007540.1-201ENST00000548473 KDM5CP41229 1560 aa18.81■□□□□ 0.6
AC007540.1-201ENST00000548473 ITSN2Q9NZM3 1697 aa18.8■□□□□ 0.6
AC007540.1-201ENST00000548473 ATP10AO60312 1499 aa18.8■□□□□ 0.6
AC007540.1-201ENST00000548473 SYCP2Q9BX26 1530 aa18.79■□□□□ 0.6
AC007540.1-201ENST00000548473 MLECQ14165 292 aa18.79■□□□□ 0.6
AC007540.1-201ENST00000548473 KIAA1107Q9UPP5 1409 aa18.79■□□□□ 0.6
AC007540.1-201ENST00000548473 PLEKHH2Q8IVE3 1493 aa18.78■□□□□ 0.6
AC007540.1-201ENST00000548473 MLH3Q9UHC1 1453 aa18.77■□□□□ 0.6
AC007540.1-201ENST00000548473 HECW2Q9P2P5 1572 aa18.76■□□□□ 0.59
AC007540.1-201ENST00000548473 SPAG9O60271 1321 aaKnown RBP18.76■□□□□ 0.59
AC007540.1-201ENST00000548473 C9orf84Q5VXU9 1444 aa18.76■□□□□ 0.59
AC007540.1-201ENST00000548473 BCORL1Q5H9F3 1711 aa18.75■□□□□ 0.59
AC007540.1-201ENST00000548473 SIGLEC1Q9BZZ2 1709 aa18.75■□□□□ 0.59
AC007540.1-201ENST00000548473 ADAMTSL3P82987 1691 aa18.75■□□□□ 0.59
AC007540.1-201ENST00000548473 DIP2CQ9Y2E4 1556 aa18.72■□□□□ 0.59
AC007540.1-201ENST00000548473 MBD5Q9P267 1494 aa18.71■□□□□ 0.59
AC007540.1-201ENST00000548473 ABCA6Q8N139 1617 aa18.71■□□□□ 0.58
AC007540.1-201ENST00000548473 KIDINS220Q9ULH0 1771 aa18.7■□□□□ 0.58
AC007540.1-201ENST00000548473 MADDQ8WXG6 1647 aa18.7■□□□□ 0.58
AC007540.1-201ENST00000548473 PTPRMP28827 1452 aa18.7■□□□□ 0.58
AC007540.1-201ENST00000548473 PLPPR3Q6T4P5 718 aa18.69■□□□□ 0.58
AC007540.1-201ENST00000548473 CAMSAP2Q08AD1 1489 aa18.69■□□□□ 0.58
AC007540.1-201ENST00000548473 MYOM3Q5VTT5 1437 aa18.66■□□□□ 0.58
AC007540.1-201ENST00000548473 ATP7AQ04656 1500 aa18.66■□□□□ 0.58
AC007540.1-201ENST00000548473 RSPH4AQ5TD94 716 aa18.66■□□□□ 0.58
AC007540.1-201ENST00000548473 REREQ9P2R6 1566 aa18.65■□□□□ 0.58
AC007540.1-201ENST00000548473 MIA2Q96PC5 1412 aa18.64■□□□□ 0.57
AC007540.1-201ENST00000548473 RIMS1Q86UR5 1692 aaKnown RBP18.63■□□□□ 0.57
AC007540.1-201ENST00000548473 CCDC141Q6ZP82 1450 aa18.63■□□□□ 0.57
AC007540.1-201ENST00000548473 INO80Q9ULG1 1556 aaPredicted RBP18.63■□□□□ 0.57
AC007540.1-201ENST00000548473 TSPY4P0CV99 314 aa18.62■□□□□ 0.57
AC007540.1-201ENST00000548473 TSPY10P0CW01 314 aa18.62■□□□□ 0.57
AC007540.1-201ENST00000548473 AGLP35573 1532 aa18.61■□□□□ 0.57
AC007540.1-201ENST00000548473 RTEL1-TNFRSF6BF6WH68 1400 aa18.61■□□□□ 0.57
AC007540.1-201ENST00000548473 A2MP01023 1474 aa18.6■□□□□ 0.57
AC007540.1-201ENST00000548473 ESF1Q9H501 851 aaKnown RBP18.59■□□□□ 0.57
AC007540.1-201ENST00000548473 FER1L4A9Z1Z3 1794 aa18.59■□□□□ 0.57
AC007540.1-201ENST00000548473 CEBPAP49715 358 aaPredicted RBP18.58■□□□□ 0.56
AC007540.1-201ENST00000548473 ARHGEF5Q12774 1597 aa18.58■□□□□ 0.56
AC007540.1-201ENST00000548473 GGT6Q6P531 493 aa18.56■□□□□ 0.56
AC007540.1-201ENST00000548473 PPARGC1BQ86YN6 1023 aaKnown RBP18.56■□□□□ 0.56
AC007540.1-201ENST00000548473 DHX29Q7Z478 1369 aaKnown RBP18.55■□□□□ 0.56
AC007540.1-201ENST00000548473 FGD6Q6ZV73 1430 aa18.55■□□□□ 0.56
AC007540.1-201ENST00000548473 PTPN23Q9H3S7 1636 aa18.53■□□□□ 0.56
AC007540.1-201ENST00000548473 PLXNC1O60486 1568 aa18.53■□□□□ 0.56
AC007540.1-201ENST00000548473 ADGBQ8N7X0 1667 aa18.53■□□□□ 0.56
AC007540.1-201ENST00000548473 KIF3BO15066 747 aa18.51■□□□□ 0.55
AC007540.1-201ENST00000548473 FAM50AQ14320 339 aaKnown RBP18.5■□□□□ 0.55
AC007540.1-201ENST00000548473 ABCC5O15440 1437 aa18.49■□□□□ 0.55
AC007540.1-201ENST00000548473 TCOF1Q13428 1488 aaKnown RBP18.49■□□□□ 0.55
AC007540.1-201ENST00000548473 CNTLNQ9NXG0 1405 aa18.48■□□□□ 0.55
AC007540.1-201ENST00000548473 MAST1Q9Y2H9 1570 aa18.47■□□□□ 0.55
AC007540.1-201ENST00000548473 CHIC2Q9UKJ5 165 aa18.46■□□□□ 0.55
AC007540.1-201ENST00000548473 PPP6R1Q9UPN7 881 aa18.46■□□□□ 0.55
AC007540.1-201ENST00000548473 DAPK1P53355 1430 aa18.46■□□□□ 0.55
AC007540.1-201ENST00000548473 ZMYM3Q14202 1370 aa18.45■□□□□ 0.54
AC007540.1-201ENST00000548473 HSPA2P54652 639 aa18.45■□□□□ 0.54
AC007540.1-201ENST00000548473 RRP7BPQ9NSQ0 103 aa18.45■□□□□ 0.54
AC007540.1-201ENST00000548473 LMTK3Q96Q04 1460 aa18.45■□□□□ 0.54
AC007540.1-201ENST00000548473 C3P01024 1663 aa18.43■□□□□ 0.54
AC007540.1-201ENST00000548473 DNMT1P26358 1616 aaKnown RBP18.42■□□□□ 0.54
AC007540.1-201ENST00000548473 SHANK2Q9UPX8 1470 aa18.42■□□□□ 0.54
AC007540.1-201ENST00000548473 KIF15Q9NS87 1388 aa18.41■□□□□ 0.54
AC007540.1-201ENST00000548473 CLTCQ00610 1675 aaKnown RBP18.41■□□□□ 0.54
AC007540.1-201ENST00000548473 WASHC2CQ9Y4E1 1318 aa18.4■□□□□ 0.54
AC007540.1-201ENST00000548473 CROCC2H7BZ55 1655 aa18.39■□□□□ 0.53
AC007540.1-201ENST00000548473 ANKRD30AQ9BXX3 1397 aa18.38■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms