RNA–Protein interactions for RNA: ENST00000548473.1

AC007540.1-201, humanhuman

TSL 3 BASIC

Gene AC007540.1, Length 507 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC007540.1-201ENST00000548473 NISCHQ9Y2I1 1504 aa29.13■■■□□ 2.25
AC007540.1-201ENST00000548473 CCDC180Q9P1Z9 1646 aa25.85■■□□□ 1.73
AC007540.1-201ENST00000548473 ABCC9O60706 1549 aa25.54■■□□□ 1.68
AC007540.1-201ENST00000548473 DCAF8L2P0C7V8 631 aa24.54■■□□□ 1.52
AC007540.1-201ENST00000548473 RB1CC1Q8TDY2 1594 aa24.44■■□□□ 1.5
AC007540.1-201ENST00000548473 NACADO15069 1562 aa24.38■■□□□ 1.49
AC007540.1-201ENST00000548473 ZCCHC6Q5VYS8 1495 aaKnown RBP24.22■■□□□ 1.47
AC007540.1-201ENST00000548473 MYO15BQ96JP2 1530 aa24.17■■□□□ 1.46
AC007540.1-201ENST00000548473 DCAF1Q9Y4B6 1507 aa24.04■■□□□ 1.44
AC007540.1-201ENST00000548473 PABPN1Q86U42 306 aaKnown RBP eCLIP23.91■■□□□ 1.42
AC007540.1-201ENST00000548473 UNC13AQ9UPW8 1703 aa23.85■■□□□ 1.41
AC007540.1-201ENST00000548473 BICRAQ9NZM4 1560 aa23.71■■□□□ 1.39
AC007540.1-201ENST00000548473 SCRIBQ14160 1630 aa23.67■■□□□ 1.38
AC007540.1-201ENST00000548473 DNAJC5BQ9UF47 199 aa23.59■■□□□ 1.37
AC007540.1-201ENST00000548473 SHROOM4Q9ULL8 1493 aa23.38■■□□□ 1.33
AC007540.1-201ENST00000548473 EIF4G1Q04637 1599 aaKnown RBP23.1■■□□□ 1.29
AC007540.1-201ENST00000548473 CC2D2AQ9P2K1 1620 aa23.04■■□□□ 1.28
AC007540.1-201ENST00000548473 CECR2Q9BXF3 1484 aa22.93■■□□□ 1.26
AC007540.1-201ENST00000548473 SMARCA4P51532 1647 aa22.6■■□□□ 1.21
AC007540.1-201ENST00000548473 BAZ1AQ9NRL2 1556 aaPredicted RBP22.56■■□□□ 1.2
AC007540.1-201ENST00000548473 ATAD2BQ9ULI0 1458 aa22.54■■□□□ 1.2
AC007540.1-201ENST00000548473 NCAPD3P42695 1498 aa22.53■■□□□ 1.2
AC007540.1-201ENST00000548473 SMARCA2P51531 1590 aa22.47■■□□□ 1.19
AC007540.1-201ENST00000548473 MROH2BQ7Z745 1585 aa22.46■■□□□ 1.19
AC007540.1-201ENST00000548473 HMGXB3Q12766 1538 aa22.36■■□□□ 1.17
AC007540.1-201ENST00000548473 PEG3Q9GZU2 1588 aa22.35■■□□□ 1.17
AC007540.1-201ENST00000548473 BAZ1BQ9UIG0 1483 aaKnown RBP22.34■■□□□ 1.17
AC007540.1-201ENST00000548473 WIZO95785 1651 aa22.2■■□□□ 1.15
AC007540.1-201ENST00000548473 RSF1Q96T23 1441 aaPredicted RBP22.18■■□□□ 1.14
AC007540.1-201ENST00000548473 NESP48681 1621 aa22.06■■□□□ 1.12
AC007540.1-201ENST00000548473 ERCC6Q03468 1493 aa22.01■■□□□ 1.11
AC007540.1-201ENST00000548473 TOP2AP11388 1531 aaKnown RBP21.94■■□□□ 1.1
AC007540.1-201ENST00000548473 LAMC3Q9Y6N6 1575 aa21.92■■□□□ 1.1
AC007540.1-201ENST00000548473 CADPSQ9ULU8 1353 aa21.9■■□□□ 1.1
AC007540.1-201ENST00000548473 PDS5BQ9NTI5 1447 aa21.82■■□□□ 1.08
AC007540.1-201ENST00000548473 CUX2O14529 1486 aa21.76■■□□□ 1.07
AC007540.1-201ENST00000548473 CCDC88BA6NC98 1476 aa21.74■■□□□ 1.07
AC007540.1-201ENST00000548473 KIF21AQ7Z4S6 1674 aa21.73■■□□□ 1.07
AC007540.1-201ENST00000548473 CFTRP13569 1480 aa21.71■■□□□ 1.07
AC007540.1-201ENST00000548473 THOC2Q8NI27 1593 aaKnown RBP21.67■■□□□ 1.06
AC007540.1-201ENST00000548473 SUPT5HO00267 1087 aaKnown RBP21.65■■□□□ 1.06
AC007540.1-201ENST00000548473 FANCD2Q9BXW9 1451 aa21.64■■□□□ 1.05
AC007540.1-201ENST00000548473 CEP164Q9UPV0 1460 aa21.6■■□□□ 1.05
AC007540.1-201ENST00000548473 MRC2Q9UBG0 1479 aa21.58■■□□□ 1.05
AC007540.1-201ENST00000548473 WDR62O43379 1518 aa21.5■■□□□ 1.03
AC007540.1-201ENST00000548473 PRDM2Q13029 1718 aa21.44■■□□□ 1.02
AC007540.1-201ENST00000548473 URB2Q14146 1524 aaKnown RBP21.42■■□□□ 1.02
AC007540.1-201ENST00000548473 DNAJC5Q9H3Z4 198 aa21.29■■□□□ 1
AC007540.1-201ENST00000548473 TOPBP1Q92547 1522 aa21.27■■□□□ 1
AC007540.1-201ENST00000548473 ABCC8Q09428 1581 aa21.24■□□□□ 0.99
AC007540.1-201ENST00000548473 DNMBPQ6XZF7 1577 aa21.21■□□□□ 0.99
AC007540.1-201ENST00000548473 IFT140Q96RY7 1462 aa21.15■□□□□ 0.98
AC007540.1-201ENST00000548473 ZNF608Q9ULD9 1512 aaPredicted RBP21.1■□□□□ 0.97
AC007540.1-201ENST00000548473 POLA1P09884 1462 aaPredicted RBP21.08■□□□□ 0.97
AC007540.1-201ENST00000548473 CUX1P39880 1505 aa21.07■□□□□ 0.96
AC007540.1-201ENST00000548473 SOGA1O94964 1423 aa21.04■□□□□ 0.96
AC007540.1-201ENST00000548473 RAD54L2Q9Y4B4 1467 aa21.03■□□□□ 0.96
AC007540.1-201ENST00000548473 FGD5Q6ZNL6 1462 aa21.02■□□□□ 0.96
AC007540.1-201ENST00000548473 TARBP1Q13395 1621 aaKnown RBP21.01■□□□□ 0.95
AC007540.1-201ENST00000548473 AQRO60306 1485 aaKnown RBP eCLIP20.99■□□□□ 0.95
AC007540.1-201ENST00000548473 EIF4G3O43432 1585 aaKnown RBP20.95■□□□□ 0.94
AC007540.1-201ENST00000548473 TDRD9Q8NDG6 1382 aaKnown RBP20.95■□□□□ 0.94
AC007540.1-201ENST00000548473 OSCARQ8IYS5 282 aa20.93■□□□□ 0.94
AC007540.1-201ENST00000548473 WRNQ14191 1432 aaPredicted RBP eCLIP20.91■□□□□ 0.94
AC007540.1-201ENST00000548473 SYNJ1O43426 1573 aa20.85■□□□□ 0.93
AC007540.1-201ENST00000548473 TOP2BQ02880 1626 aa20.83■□□□□ 0.93
AC007540.1-201ENST00000548473 FBLN2P98095 1184 aa20.82■□□□□ 0.92
AC007540.1-201ENST00000548473 BIVM-ERCC5R4GMW8 1640 aa20.81■□□□□ 0.92
AC007540.1-201ENST00000548473 ABCA10Q8WWZ4 1543 aa20.79■□□□□ 0.92
AC007540.1-201ENST00000548473 WDR97A6NE52 1622 aa20.78■□□□□ 0.92
AC007540.1-201ENST00000548473 GRIN2BQ13224 1484 aa20.76■□□□□ 0.91
AC007540.1-201ENST00000548473 GAPVD1Q14C86 1478 aa20.76■□□□□ 0.91
AC007540.1-201ENST00000548473 SNAPC4Q5SXM2 1469 aa20.76■□□□□ 0.91
AC007540.1-201ENST00000548473 CHMP7Q8WUX9 453 aaPredicted RBP20.71■□□□□ 0.91
AC007540.1-201ENST00000548473 CHD1O14646 1710 aa20.7■□□□□ 0.9
AC007540.1-201ENST00000548473 MAGI1Q96QZ7 1491 aaPredicted RBP20.69■□□□□ 0.9
AC007540.1-201ENST00000548473 ABCA5Q8WWZ7 1642 aa20.69■□□□□ 0.9
AC007540.1-201ENST00000548473 PBRM1Q86U86 1689 aa20.66■□□□□ 0.9
AC007540.1-201ENST00000548473 SYNJ2O15056 1496 aa20.63■□□□□ 0.89
AC007540.1-201ENST00000548473 TRIM41Q8WV44 630 aa20.61■□□□□ 0.89
AC007540.1-201ENST00000548473 RIMBP3CA6NJZ7 1639 aa20.53■□□□□ 0.88
AC007540.1-201ENST00000548473 RIMBP3BA6NNM3 1639 aa20.53■□□□□ 0.88
AC007540.1-201ENST00000548473 RIMBP3Q9UFD9 1639 aa20.53■□□□□ 0.88
AC007540.1-201ENST00000548473 ARHGEF11O15085 1522 aa20.53■□□□□ 0.88
AC007540.1-201ENST00000548473 ERICH3Q5RHP9 1530 aa20.53■□□□□ 0.88
AC007540.1-201ENST00000548473 FHAD1B1AJZ9 1412 aa20.52■□□□□ 0.87
AC007540.1-201ENST00000548473 ADAMTS12P58397 1594 aa20.51■□□□□ 0.87
AC007540.1-201ENST00000548473 KIF27Q86VH2 1401 aa20.49■□□□□ 0.87
AC007540.1-201ENST00000548473 GRIN2AQ12879 1464 aa20.49■□□□□ 0.87
AC007540.1-201ENST00000548473 CLASP1Q7Z460 1538 aa20.48■□□□□ 0.87
AC007540.1-201ENST00000548473 IGF1RP08069 1367 aa20.45■□□□□ 0.86
AC007540.1-201ENST00000548473 CYB5RLQ6IPT4 315 aa20.44■□□□□ 0.86
AC007540.1-201ENST00000548473 NUP160Q12769 1436 aa20.4■□□□□ 0.86
AC007540.1-201ENST00000548473 CEP170Q5SW79 1584 aa20.38■□□□□ 0.85
AC007540.1-201ENST00000548473 ARAP1Q96P48 1450 aa20.36■□□□□ 0.85
AC007540.1-201ENST00000548473 CARMIL1Q5VZK9 1371 aa20.33■□□□□ 0.84
AC007540.1-201ENST00000548473 RUSC2Q8N2Y8 1516 aa20.31■□□□□ 0.84
AC007540.1-201ENST00000548473 CUL7Q14999 1698 aa20.29■□□□□ 0.84
AC007540.1-201ENST00000548473 JPH4Q96JJ6 628 aa20.27■□□□□ 0.84
AC007540.1-201ENST00000548473 ERCC6L2Q5T890 1561 aa20.25■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms