RNA–Protein interactions for RNA: ENST00000548159.5

CNOT2-209, Transcript of CCR4-NOT transcription complex subunit 2, humanhuman

TSL 1 (best)

Gene CNOT2, Length 2,549 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT2-209ENST00000548159 PRG4Q92954 1404 aaPredicted RBP22.52■■□□□ 1.2
CNOT2-209ENST00000548159 FBLN2P98095 1184 aa22.52■■□□□ 1.19
CNOT2-209ENST00000548159 RAPGEF6Q8TEU7 1601 aa22.51■■□□□ 1.19
CNOT2-209ENST00000548159 EIF4G2P78344 907 aaKnown RBP eCLIP22.51■■□□□ 1.19
CNOT2-209ENST00000548159 TSHZ2Q9NRE2 1034 aa22.51■■□□□ 1.19
CNOT2-209ENST00000548159 C11orf95C9JLR9 678 aaPredicted RBP22.5■■□□□ 1.19
CNOT2-209ENST00000548159 CHMP7Q8WUX9 453 aaPredicted RBP22.5■■□□□ 1.19
CNOT2-209ENST00000548159 CDK11AQ9UQ88 783 aaPredicted RBP22.5■■□□□ 1.19
CNOT2-209ENST00000548159 ROCK1Q13464 1354 aa22.49■■□□□ 1.19
CNOT2-209ENST00000548159 ANKRD30BQ9BXX2 1392 aa22.49■■□□□ 1.19
CNOT2-209ENST00000548159 DNMT1P26358 1616 aaKnown RBP22.48■■□□□ 1.19
CNOT2-209ENST00000548159 NBPF8Q3BBV2 869 aa22.48■■□□□ 1.19
CNOT2-209ENST00000548159 SLC4A1APQ9BWU0 796 aaKnown RBP22.48■■□□□ 1.19
CNOT2-209ENST00000548159 PLB1Q6P1J6 1458 aa22.48■■□□□ 1.19
CNOT2-209ENST00000548159 ZNF777Q9ULD5 760 aaPredicted RBP22.45■■□□□ 1.18
CNOT2-209ENST00000548159 CFDP1Q9UEE9 299 aaPredicted RBP22.45■■□□□ 1.18
CNOT2-209ENST00000548159 ERCC6Q03468 1493 aa22.44■■□□□ 1.18
CNOT2-209ENST00000548159 CEP170Q5SW79 1584 aa22.43■■□□□ 1.18
CNOT2-209ENST00000548159 RPRD2Q5VT52 1461 aaKnown RBP22.43■■□□□ 1.18
CNOT2-209ENST00000548159 TROQ12816 1431 aaPredicted RBP22.42■■□□□ 1.18
CNOT2-209ENST00000548159 CCDC184Q52MB2 194 aa22.41■■□□□ 1.18
CNOT2-209ENST00000548159 HNRNPUQ00839 825 aaKnown RBP eCLIP22.4■■□□□ 1.18
CNOT2-209ENST00000548159 JPH4Q96JJ6 628 aa22.39■■□□□ 1.18
CNOT2-209ENST00000548159 CAMSAP2Q08AD1 1489 aa22.39■■□□□ 1.17
CNOT2-209ENST00000548159 TEX14Q8IWB6 1497 aa22.39■■□□□ 1.17
CNOT2-209ENST00000548159 NEFLP07196 543 aa22.38■■□□□ 1.17
CNOT2-209ENST00000548159 GPATCH8Q9UKJ3 1502 aaKnown RBP22.38■■□□□ 1.17
CNOT2-209ENST00000548159 MAGI1Q96QZ7 1491 aaPredicted RBP22.38■■□□□ 1.17
CNOT2-209ENST00000548159 KIF14Q15058 1648 aa22.38■■□□□ 1.17
CNOT2-209ENST00000548159 SYNJ2O15056 1496 aa22.37■■□□□ 1.17
CNOT2-209ENST00000548159 NCOA1Q15788 1441 aa22.36■■□□□ 1.17
CNOT2-209ENST00000548159 CCDC7Q96M83 1385 aa22.35■■□□□ 1.17
CNOT2-209ENST00000548159 PZPP20742 1482 aa22.35■■□□□ 1.17
CNOT2-209ENST00000548159 CNTLNQ9NXG0 1405 aa22.35■■□□□ 1.17
CNOT2-209ENST00000548159 PRKRIP1Q9H875 184 aaPredicted RBP22.3■■□□□ 1.16
CNOT2-209ENST00000548159 SPATA31E1Q6ZUB1 1445 aa22.3■■□□□ 1.16
CNOT2-209ENST00000548159 CARMIL2Q6F5E8 1435 aa22.29■■□□□ 1.16
CNOT2-209ENST00000548159 KIF7Q2M1P5 1343 aa22.28■■□□□ 1.16
CNOT2-209ENST00000548159 PKD2Q13563 968 aa22.28■■□□□ 1.16
CNOT2-209ENST00000548159 NUP160Q12769 1436 aa22.28■■□□□ 1.16
CNOT2-209ENST00000548159 ITSN2Q9NZM3 1697 aa22.27■■□□□ 1.16
CNOT2-209ENST00000548159 ZNF326Q5BKZ1 582 aaKnown RBP22.26■■□□□ 1.15
CNOT2-209ENST00000548159 PLEKHD1A6NEE1 506 aa22.26■■□□□ 1.15
CNOT2-209ENST00000548159 IRX6P78412 446 aaPredicted RBP22.25■■□□□ 1.15
CNOT2-209ENST00000548159 FAM9BQ8IZU0 186 aa22.24■■□□□ 1.15
CNOT2-209ENST00000548159 ADCY10Q96PN6 1610 aa22.24■■□□□ 1.15
CNOT2-209ENST00000548159 ADGRL2O95490 1459 aa22.23■■□□□ 1.15
CNOT2-209ENST00000548159 ANKRD30AQ9BXX3 1397 aa22.23■■□□□ 1.15
CNOT2-209ENST00000548159 ADGBQ8N7X0 1667 aa22.22■■□□□ 1.15
CNOT2-209ENST00000548159 KIAA1107Q9UPP5 1409 aa22.22■■□□□ 1.15
CNOT2-209ENST00000548159 ATP10BO94823 1461 aa22.22■■□□□ 1.15
CNOT2-209ENST00000548159 ANKRD50Q9ULJ7 1429 aa22.21■■□□□ 1.15
CNOT2-209ENST00000548159 MRS2Q9HD23 443 aa22.21■■□□□ 1.15
CNOT2-209ENST00000548159 CROCC2H7BZ55 1655 aa22.19■■□□□ 1.14
CNOT2-209ENST00000548159 CNGB1Q14028 1251 aaPredicted RBP22.19■■□□□ 1.14
CNOT2-209ENST00000548159 ABCA8O94911 1581 aa22.18■■□□□ 1.14
CNOT2-209ENST00000548159 ABCC10Q5T3U5 1492 aa22.17■■□□□ 1.14
CNOT2-209ENST00000548159 CDC42BPAQ5VT25 1732 aa22.17■■□□□ 1.14
CNOT2-209ENST00000548159 HNRNPMP52272 730 aaKnown RBP eCLIP22.17■■□□□ 1.141e-8■■■■□ 24.2
CNOT2-209ENST00000548159 POLR3GLQ9BT43 218 aa22.17■■□□□ 1.14
CNOT2-209ENST00000548159 NUP155O75694 1391 aa22.17■■□□□ 1.14
CNOT2-209ENST00000548159 MBD5Q9P267 1494 aa22.16■■□□□ 1.14
CNOT2-209ENST00000548159 MYT1Q01538 1121 aa22.15■■□□□ 1.14
CNOT2-209ENST00000548159 C9orf84Q5VXU9 1444 aa22.14■■□□□ 1.14
CNOT2-209ENST00000548159 USP47Q96K76 1375 aa22.14■■□□□ 1.13
CNOT2-209ENST00000548159 TSPY4P0CV99 314 aa22.12■■□□□ 1.13
CNOT2-209ENST00000548159 TSPY10P0CW01 314 aa22.12■■□□□ 1.13
CNOT2-209ENST00000548159 BCORL1Q5H9F3 1711 aa22.11■■□□□ 1.13
CNOT2-209ENST00000548159 POLR1AO95602 1720 aaPredicted RBP22.1■■□□□ 1.13
CNOT2-209ENST00000548159 RBM19Q9Y4C8 960 aaKnown RBP22.1■■□□□ 1.13
CNOT2-209ENST00000548159 KDM2AQ9Y2K7 1162 aa22.08■■□□□ 1.13
CNOT2-209ENST00000548159 DHX29Q7Z478 1369 aaKnown RBP22.08■■□□□ 1.12
CNOT2-209ENST00000548159 KIF15Q9NS87 1388 aa22.06■■□□□ 1.12
CNOT2-209ENST00000548159 PTPRGP23470 1445 aa22.06■■□□□ 1.12
CNOT2-209ENST00000548159 SHANK2Q9UPX8 1470 aa22.05■■□□□ 1.12
CNOT2-209ENST00000548159 ZBED9Q6R2W3 1325 aa22.04■■□□□ 1.12
CNOT2-209ENST00000548159 CARD11Q9BXL7 1154 aa22.03■■□□□ 1.12
CNOT2-209ENST00000548159 KDM5CP41229 1560 aa22.03■■□□□ 1.12
CNOT2-209ENST00000548159 DCAF11Q8TEB1 546 aa22.02■■□□□ 1.11
CNOT2-209ENST00000548159 SENP3-EIF4A1A0A087X0R7 540 aa22.01■■□□□ 1.11
CNOT2-209ENST00000548159 UHRF1BP1Q6BDS2 1440 aa22■■□□□ 1.11
CNOT2-209ENST00000548159 ST20-MTHFSA0A0A6YYL1 179 aa21.98■■□□□ 1.11
CNOT2-209ENST00000548159 RALGAPBQ86X10 1494 aa21.97■■□□□ 1.11
CNOT2-209ENST00000548159 SAMD9LQ8IVG5 1584 aa21.97■■□□□ 1.11
CNOT2-209ENST00000548159 KDM5DQ9BY66 1539 aa21.96■■□□□ 1.11
CNOT2-209ENST00000548159 CDC42BPBQ9Y5S2 1711 aa21.96■■□□□ 1.11
CNOT2-209ENST00000548159 ARHGEF5Q12774 1597 aa21.95■■□□□ 1.1
CNOT2-209ENST00000548159 ANP32EQ9BTT0 268 aa21.94■■□□□ 1.1
CNOT2-209ENST00000548159 CCDC141Q6ZP82 1450 aa21.93■■□□□ 1.1
CNOT2-209ENST00000548159 ARID4BQ4LE39 1312 aaPredicted RBP21.92■■□□□ 1.1
CNOT2-209ENST00000548159 ARHGEF12Q9NZN5 1544 aa21.92■■□□□ 1.1
CNOT2-209ENST00000548159 PPP4R2Q9NY27 417 aa21.91■■□□□ 1.1
CNOT2-209ENST00000548159 RGL3Q3MIN7 710 aa21.91■■□□□ 1.1
CNOT2-209ENST00000548159 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.91■■□□□ 1.19e-7■■■□□ 16.4
CNOT2-209ENST00000548159 FAM135AQ9P2D6 1515 aa21.9■■□□□ 1.1
CNOT2-209ENST00000548159 B4GALNT3Q6L9W6 998 aa21.89■■□□□ 1.1
CNOT2-209ENST00000548159 ERICH6BQ5W0A0 696 aa21.89■■□□□ 1.09
CNOT2-209ENST00000548159 PREX2Q70Z35 1606 aa21.89■■□□□ 1.09
CNOT2-209ENST00000548159 SYCP2Q9BX26 1530 aa21.88■■□□□ 1.09
CNOT2-209ENST00000548159 PNISRQ8TF01 805 aaKnown RBP21.87■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms