RNA–Protein interactions for RNA: ENST00000547923.1

TROAP-206, Transcript of trophinin associated protein, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TROAP, Length 1,652 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TROAP-206ENST00000547923 CFAP74Q9C0B2 1584 aa15.75■□□□□ 0.11
TROAP-206ENST00000547923 ARAP3Q8WWN8 1544 aa15.74■□□□□ 0.11
TROAP-206ENST00000547923 KANK4Q5T7N3 995 aaPredicted RBP15.74■□□□□ 0.11
TROAP-206ENST00000547923 ADGRL1O94910 1474 aa15.74■□□□□ 0.11
TROAP-206ENST00000547923 CFDP1Q9UEE9 299 aaPredicted RBP15.73■□□□□ 0.11
TROAP-206ENST00000547923 DENND4BO75064 1496 aaPredicted RBP15.73■□□□□ 0.11
TROAP-206ENST00000547923 SCAPERQ9BY12 1400 aa15.72■□□□□ 0.11
TROAP-206ENST00000547923 CDC42BPBQ9Y5S2 1711 aa15.71■□□□□ 0.11
TROAP-206ENST00000547923 LRRC9Q6ZRR7 1453 aa15.71■□□□□ 0.11
TROAP-206ENST00000547923 SENP3Q9H4L4 574 aaPredicted RBP15.71■□□□□ 0.11
TROAP-206ENST00000547923 MAP3K1Q13233 1512 aa15.71■□□□□ 0.1
TROAP-206ENST00000547923 MYT1LQ9UL68 1186 aa15.7■□□□□ 0.1
TROAP-206ENST00000547923 CDC42BPAQ5VT25 1732 aa15.7■□□□□ 0.1
TROAP-206ENST00000547923 ILDR1Q86SU0 546 aaPredicted RBP15.7■□□□□ 0.1
TROAP-206ENST00000547923 GPATCH8Q9UKJ3 1502 aaKnown RBP15.69■□□□□ 0.1
TROAP-206ENST00000547923 PREX2Q70Z35 1606 aa15.69■□□□□ 0.1
TROAP-206ENST00000547923 NCOA2Q15596 1464 aa15.69■□□□□ 0.1
TROAP-206ENST00000547923 SUPT6HQ7KZ85 1726 aaKnown RBP15.67■□□□□ 0.1
TROAP-206ENST00000547923 POGZQ7Z3K3 1410 aa15.66■□□□□ 0.1
TROAP-206ENST00000547923 FRMPD1Q5SYB0 1578 aa15.65■□□□□ 0.1
TROAP-206ENST00000547923 AFAP1Q8N556 730 aa15.64■□□□□ 0.09
TROAP-206ENST00000547923 RICTORQ6R327 1708 aa15.64■□□□□ 0.09
TROAP-206ENST00000547923 ZNF518AQ6AHZ1 1483 aa15.63■□□□□ 0.09
TROAP-206ENST00000547923 HNRNPMP52272 730 aaKnown RBP eCLIP15.62■□□□□ 0.09
TROAP-206ENST00000547923 ABCC1P33527 1531 aa15.62■□□□□ 0.09
TROAP-206ENST00000547923 ARID4BQ4LE39 1312 aaPredicted RBP15.62■□□□□ 0.09
TROAP-206ENST00000547923 ZNF644Q9H582 1327 aaPredicted RBP15.62■□□□□ 0.09
TROAP-206ENST00000547923 ITSN2Q9NZM3 1697 aa15.62■□□□□ 0.09
TROAP-206ENST00000547923 ARHGEF12Q9NZN5 1544 aa15.61■□□□□ 0.09
TROAP-206ENST00000547923 SAMD9LQ8IVG5 1584 aa15.61■□□□□ 0.09
TROAP-206ENST00000547923 PLEKHH2Q8IVE3 1493 aa15.6■□□□□ 0.09
TROAP-206ENST00000547923 SYCP2Q9BX26 1530 aa15.6■□□□□ 0.09
TROAP-206ENST00000547923 TRAPPC8Q9Y2L5 1435 aa15.6■□□□□ 0.09
TROAP-206ENST00000547923 PPARGC1BQ86YN6 1023 aaKnown RBP15.59■□□□□ 0.09
TROAP-206ENST00000547923 ZFYVE16Q7Z3T8 1539 aa15.59■□□□□ 0.09
TROAP-206ENST00000547923 YEATS2Q9ULM3 1422 aa15.58■□□□□ 0.08
TROAP-206ENST00000547923 ZMYM4Q5VZL5 1548 aa15.57■□□□□ 0.08
TROAP-206ENST00000547923 MYOM3Q5VTT5 1437 aa15.57■□□□□ 0.08
TROAP-206ENST00000547923 MAGI2Q86UL8 1455 aa15.57■□□□□ 0.08
TROAP-206ENST00000547923 KIAA1107Q9UPP5 1409 aa15.56■□□□□ 0.08
TROAP-206ENST00000547923 ARHGEF40Q8TER5 1519 aa15.56■□□□□ 0.08
TROAP-206ENST00000547923 SPAG9O60271 1321 aaKnown RBP15.56■□□□□ 0.08
TROAP-206ENST00000547923 CAMSAP2Q08AD1 1489 aa15.55■□□□□ 0.08
TROAP-206ENST00000547923 KDM4FA0A1W2PPD8 638 aa15.55■□□□□ 0.08
TROAP-206ENST00000547923 KDM5CP41229 1560 aa15.54■□□□□ 0.08
TROAP-206ENST00000547923 HECW2Q9P2P5 1572 aa15.53■□□□□ 0.08
TROAP-206ENST00000547923 MIA2Q96PC5 1412 aa15.52■□□□□ 0.08
TROAP-206ENST00000547923 MBD5Q9P267 1494 aa15.52■□□□□ 0.07
TROAP-206ENST00000547923 MLH3Q9UHC1 1453 aa15.51■□□□□ 0.07
TROAP-206ENST00000547923 MLECQ14165 292 aa15.51■□□□□ 0.07
TROAP-206ENST00000547923 ATP10AO60312 1499 aa15.5■□□□□ 0.07
TROAP-206ENST00000547923 TSPY4P0CV99 314 aa15.5■□□□□ 0.07
TROAP-206ENST00000547923 TSPY10P0CW01 314 aa15.5■□□□□ 0.07
TROAP-206ENST00000547923 CCDC141Q6ZP82 1450 aa15.5■□□□□ 0.07
TROAP-206ENST00000547923 C9orf84Q5VXU9 1444 aa15.49■□□□□ 0.07
TROAP-206ENST00000547923 RSPH4AQ5TD94 716 aa15.49■□□□□ 0.07
TROAP-206ENST00000547923 FGD6Q6ZV73 1430 aa15.49■□□□□ 0.07
TROAP-206ENST00000547923 FAM50AQ14320 339 aaKnown RBP15.48■□□□□ 0.07
TROAP-206ENST00000547923 KIDINS220Q9ULH0 1771 aa15.47■□□□□ 0.07
TROAP-206ENST00000547923 ATP7AQ04656 1500 aa15.46■□□□□ 0.07
TROAP-206ENST00000547923 DIP2CQ9Y2E4 1556 aa15.46■□□□□ 0.07
TROAP-206ENST00000547923 SIGLEC1Q9BZZ2 1709 aa15.46■□□□□ 0.06
TROAP-206ENST00000547923 ABCA6Q8N139 1617 aa15.45■□□□□ 0.06
TROAP-206ENST00000547923 PTPN23Q9H3S7 1636 aa15.44■□□□□ 0.06
TROAP-206ENST00000547923 ARHGEF5Q12774 1597 aa15.42■□□□□ 0.06
TROAP-206ENST00000547923 INO80Q9ULG1 1556 aaPredicted RBP15.42■□□□□ 0.06
TROAP-206ENST00000547923 PLPPR3Q6T4P5 718 aa15.42■□□□□ 0.06
TROAP-206ENST00000547923 RTEL1-TNFRSF6BF6WH68 1400 aa15.41■□□□□ 0.06
TROAP-206ENST00000547923 ESF1Q9H501 851 aaKnown RBP15.41■□□□□ 0.06
TROAP-206ENST00000547923 A2MP01023 1474 aa15.4■□□□□ 0.06
TROAP-206ENST00000547923 TCOF1Q13428 1488 aaKnown RBP15.4■□□□□ 0.06
TROAP-206ENST00000547923 BCORL1Q5H9F3 1711 aa15.39■□□□□ 0.05
TROAP-206ENST00000547923 CHIC2Q9UKJ5 165 aa15.39■□□□□ 0.05
TROAP-206ENST00000547923 REREQ9P2R6 1566 aa15.38■□□□□ 0.05
TROAP-206ENST00000547923 DAPK1P53355 1430 aa15.38■□□□□ 0.05
TROAP-206ENST00000547923 ITGAEP38570 1179 aa15.38■□□□□ 0.05
TROAP-206ENST00000547923 ABCC5O15440 1437 aa15.37■□□□□ 0.05
TROAP-206ENST00000547923 GGT6Q6P531 493 aa15.37■□□□□ 0.05
TROAP-206ENST00000547923 ADAMTSL3P82987 1691 aa15.37■□□□□ 0.05
TROAP-206ENST00000547923 MADDQ8WXG6 1647 aa15.36■□□□□ 0.05
TROAP-206ENST00000547923 RRP7BPQ9NSQ0 103 aa15.35■□□□□ 0.05
TROAP-206ENST00000547923 DHX29Q7Z478 1369 aaKnown RBP15.35■□□□□ 0.05
TROAP-206ENST00000547923 AGLP35573 1532 aa15.35■□□□□ 0.05
TROAP-206ENST00000547923 KIF3BO15066 747 aa15.35■□□□□ 0.05
TROAP-206ENST00000547923 DNMT1P26358 1616 aaKnown RBP15.34■□□□□ 0.05
TROAP-206ENST00000547923 ADGBQ8N7X0 1667 aa15.34■□□□□ 0.05
TROAP-206ENST00000547923 PTPRMP28827 1452 aa15.34■□□□□ 0.05
TROAP-206ENST00000547923 MAST1Q9Y2H9 1570 aa15.34■□□□□ 0.05
TROAP-206ENST00000547923 SHANK2Q9UPX8 1470 aa15.33■□□□□ 0.04
TROAP-206ENST00000547923 KIF15Q9NS87 1388 aa15.33■□□□□ 0.04
TROAP-206ENST00000547923 CROCC2H7BZ55 1655 aa15.33■□□□□ 0.04
TROAP-206ENST00000547923 PLXNC1O60486 1568 aa15.33■□□□□ 0.04
TROAP-206ENST00000547923 ANKRD30AQ9BXX3 1397 aa15.32■□□□□ 0.04
TROAP-206ENST00000547923 RIMS1Q86UR5 1692 aaKnown RBP15.31■□□□□ 0.04
TROAP-206ENST00000547923 FER1L4A9Z1Z3 1794 aa15.29■□□□□ 0.04
TROAP-206ENST00000547923 CEBPAP49715 358 aaPredicted RBP15.28■□□□□ 0.04
TROAP-206ENST00000547923 PTPRKQ15262 1439 aa15.28■□□□□ 0.04
TROAP-206ENST00000547923 RRBP1Q9P2E9 1410 aaKnown RBP15.28■□□□□ 0.04
TROAP-206ENST00000547923 DUOX2Q9NRD8 1548 aa15.27■□□□□ 0.04
TROAP-206ENST00000547923 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP15.27■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 126.9 ms