RNA–Protein interactions for RNA: ENST00000547923.1

TROAP-206, Transcript of trophinin associated protein, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TROAP, Length 1,652 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TROAP-206ENST00000547923 NISCHQ9Y2I1 1504 aa24.11■■□□□ 1.45
TROAP-206ENST00000547923 CCDC180Q9P1Z9 1646 aa21.34■■□□□ 1.01
TROAP-206ENST00000547923 ABCC9O60706 1549 aa20.96■□□□□ 0.95
TROAP-206ENST00000547923 DCAF8L2P0C7V8 631 aa20.32■□□□□ 0.84
TROAP-206ENST00000547923 RB1CC1Q8TDY2 1594 aa20.11■□□□□ 0.81
TROAP-206ENST00000547923 ZCCHC6Q5VYS8 1495 aaKnown RBP20.08■□□□□ 0.81
TROAP-206ENST00000547923 NACADO15069 1562 aa20.08■□□□□ 0.8
TROAP-206ENST00000547923 MYO15BQ96JP2 1530 aa19.95■□□□□ 0.78
TROAP-206ENST00000547923 DCAF1Q9Y4B6 1507 aa19.9■□□□□ 0.78
TROAP-206ENST00000547923 UNC13AQ9UPW8 1703 aa19.66■□□□□ 0.74
TROAP-206ENST00000547923 PABPN1Q86U42 306 aaKnown RBP eCLIP19.63■□□□□ 0.73
TROAP-206ENST00000547923 SCRIBQ14160 1630 aa19.57■□□□□ 0.72
TROAP-206ENST00000547923 BICRAQ9NZM4 1560 aa19.5■□□□□ 0.71
TROAP-206ENST00000547923 DNAJC5BQ9UF47 199 aa19.43■□□□□ 0.7
TROAP-206ENST00000547923 SHROOM4Q9ULL8 1493 aa19.25■□□□□ 0.67
TROAP-206ENST00000547923 EIF4G1Q04637 1599 aaKnown RBP18.98■□□□□ 0.63
TROAP-206ENST00000547923 CC2D2AQ9P2K1 1620 aa18.89■□□□□ 0.61
TROAP-206ENST00000547923 CECR2Q9BXF3 1484 aa18.81■□□□□ 0.6
TROAP-206ENST00000547923 BAZ1AQ9NRL2 1556 aaPredicted RBP18.68■□□□□ 0.58
TROAP-206ENST00000547923 SMARCA4P51532 1647 aa18.68■□□□□ 0.58
TROAP-206ENST00000547923 MROH2BQ7Z745 1585 aa18.6■□□□□ 0.57
TROAP-206ENST00000547923 ATAD2BQ9ULI0 1458 aa18.58■□□□□ 0.57
TROAP-206ENST00000547923 SMARCA2P51531 1590 aa18.55■□□□□ 0.56
TROAP-206ENST00000547923 NCAPD3P42695 1498 aa18.54■□□□□ 0.56
TROAP-206ENST00000547923 AEBP2Q6ZN18 517 aaPredicted RBP18.47■□□□□ 0.55
TROAP-206ENST00000547923 PEG3Q9GZU2 1588 aa18.47■□□□□ 0.55
TROAP-206ENST00000547923 BAZ1BQ9UIG0 1483 aaKnown RBP18.47■□□□□ 0.55
TROAP-206ENST00000547923 HMGXB3Q12766 1538 aa18.44■□□□□ 0.54
TROAP-206ENST00000547923 CHIC1Q5VXU3 224 aa18.42■□□□□ 0.54
TROAP-206ENST00000547923 RSF1Q96T23 1441 aaPredicted RBP18.42■□□□□ 0.54
TROAP-206ENST00000547923 WIZO95785 1651 aa18.41■□□□□ 0.54
TROAP-206ENST00000547923 DNAJC5Q9H3Z4 198 aa18.28■□□□□ 0.52
TROAP-206ENST00000547923 TOP2AP11388 1531 aaKnown RBP18.18■□□□□ 0.5
TROAP-206ENST00000547923 SUPT5HO00267 1087 aaKnown RBP18.12■□□□□ 0.49
TROAP-206ENST00000547923 NESP48681 1621 aa18.12■□□□□ 0.49
TROAP-206ENST00000547923 ERCC6Q03468 1493 aa18.1■□□□□ 0.49
TROAP-206ENST00000547923 CADPSQ9ULU8 1353 aa18.04■□□□□ 0.48
TROAP-206ENST00000547923 LAMC3Q9Y6N6 1575 aa18.04■□□□□ 0.48
TROAP-206ENST00000547923 CCDC88BA6NC98 1476 aa18■□□□□ 0.47
TROAP-206ENST00000547923 PDS5BQ9NTI5 1447 aa17.97■□□□□ 0.47
TROAP-206ENST00000547923 CFTRP13569 1480 aa17.92■□□□□ 0.46
TROAP-206ENST00000547923 KIF21AQ7Z4S6 1674 aa17.88■□□□□ 0.45
TROAP-206ENST00000547923 FANCD2Q9BXW9 1451 aa17.84■□□□□ 0.45
TROAP-206ENST00000547923 CEP164Q9UPV0 1460 aa17.82■□□□□ 0.44
TROAP-206ENST00000547923 CUX2O14529 1486 aa17.79■□□□□ 0.44
TROAP-206ENST00000547923 THOC2Q8NI27 1593 aaKnown RBP17.78■□□□□ 0.44
TROAP-206ENST00000547923 MRC2Q9UBG0 1479 aa17.77■□□□□ 0.43
TROAP-206ENST00000547923 PRDM2Q13029 1718 aa17.75■□□□□ 0.43
TROAP-206ENST00000547923 WDR62O43379 1518 aa17.67■□□□□ 0.42
TROAP-206ENST00000547923 URB2Q14146 1524 aaKnown RBP17.63■□□□□ 0.41
TROAP-206ENST00000547923 TOPBP1Q92547 1522 aa17.54■□□□□ 0.4
TROAP-206ENST00000547923 ABCC8Q09428 1581 aa17.53■□□□□ 0.4
TROAP-206ENST00000547923 DNMBPQ6XZF7 1577 aa17.51■□□□□ 0.39
TROAP-206ENST00000547923 CUX1P39880 1505 aa17.44■□□□□ 0.38
TROAP-206ENST00000547923 IFT140Q96RY7 1462 aa17.43■□□□□ 0.38
TROAP-206ENST00000547923 POLA1P09884 1462 aaPredicted RBP17.4■□□□□ 0.38
TROAP-206ENST00000547923 FGD5Q6ZNL6 1462 aa17.38■□□□□ 0.37
TROAP-206ENST00000547923 WRNQ14191 1432 aaPredicted RBP eCLIP17.38■□□□□ 0.37
TROAP-206ENST00000547923 SOGA1O94964 1423 aa17.37■□□□□ 0.37
TROAP-206ENST00000547923 ZNF608Q9ULD9 1512 aaPredicted RBP17.35■□□□□ 0.37
TROAP-206ENST00000547923 RAD54L2Q9Y4B4 1467 aa17.35■□□□□ 0.37
TROAP-206ENST00000547923 TARBP1Q13395 1621 aaKnown RBP17.33■□□□□ 0.37
TROAP-206ENST00000547923 SYNJ1O43426 1573 aa17.3■□□□□ 0.36
TROAP-206ENST00000547923 TDRD9Q8NDG6 1382 aaKnown RBP17.29■□□□□ 0.36
TROAP-206ENST00000547923 AQRO60306 1485 aaKnown RBP eCLIP17.29■□□□□ 0.369e-11■■■■■ 85.5
TROAP-206ENST00000547923 TOP2BQ02880 1626 aa17.28■□□□□ 0.36
TROAP-206ENST00000547923 BIVM-ERCC5R4GMW8 1640 aa17.27■□□□□ 0.36
TROAP-206ENST00000547923 EIF4G3O43432 1585 aaKnown RBP17.27■□□□□ 0.35
TROAP-206ENST00000547923 TRIM41Q8WV44 630 aa17.19■□□□□ 0.34
TROAP-206ENST00000547923 ABCA10Q8WWZ4 1543 aa17.18■□□□□ 0.34
TROAP-206ENST00000547923 WDR97A6NE52 1622 aa17.18■□□□□ 0.34
TROAP-206ENST00000547923 FBLN2P98095 1184 aa17.18■□□□□ 0.34
TROAP-206ENST00000547923 GAPVD1Q14C86 1478 aa17.15■□□□□ 0.34
TROAP-206ENST00000547923 GRIN2BQ13224 1484 aa17.14■□□□□ 0.33
TROAP-206ENST00000547923 OSCARQ8IYS5 282 aa17.13■□□□□ 0.33
TROAP-206ENST00000547923 SNAPC4Q5SXM2 1469 aa17.12■□□□□ 0.33
TROAP-206ENST00000547923 ABCA5Q8WWZ7 1642 aa17.1■□□□□ 0.33
TROAP-206ENST00000547923 CHMP7Q8WUX9 453 aaPredicted RBP17.09■□□□□ 0.33
TROAP-206ENST00000547923 MAGI1Q96QZ7 1491 aaPredicted RBP17.07■□□□□ 0.32
TROAP-206ENST00000547923 PBRM1Q86U86 1689 aa17.06■□□□□ 0.32
TROAP-206ENST00000547923 KIF27Q86VH2 1401 aa17.02■□□□□ 0.32
TROAP-206ENST00000547923 CHD1O14646 1710 aa17.02■□□□□ 0.32
TROAP-206ENST00000547923 SYNJ2O15056 1496 aa17.01■□□□□ 0.31
TROAP-206ENST00000547923 ERICH3Q5RHP9 1530 aa16.97■□□□□ 0.31
TROAP-206ENST00000547923 FHAD1B1AJZ9 1412 aa16.95■□□□□ 0.3
TROAP-206ENST00000547923 ADAMTS12P58397 1594 aa16.94■□□□□ 0.3
TROAP-206ENST00000547923 IGF1RP08069 1367 aa16.93■□□□□ 0.3
TROAP-206ENST00000547923 GRIN2AQ12879 1464 aa16.91■□□□□ 0.3
TROAP-206ENST00000547923 RUSC2Q8N2Y8 1516 aa16.9■□□□□ 0.3
TROAP-206ENST00000547923 CARMIL1Q5VZK9 1371 aa16.84■□□□□ 0.29
TROAP-206ENST00000547923 CUL7Q14999 1698 aa16.83■□□□□ 0.28
TROAP-206ENST00000547923 CLASP1Q7Z460 1538 aa16.82■□□□□ 0.28
TROAP-206ENST00000547923 ARHGEF11O15085 1522 aa16.81■□□□□ 0.28
TROAP-206ENST00000547923 CEP170Q5SW79 1584 aa16.8■□□□□ 0.28
TROAP-206ENST00000547923 NUP160Q12769 1436 aa16.8■□□□□ 0.28
TROAP-206ENST00000547923 FAM9AQ8IZU1 332 aaPredicted RBP16.78■□□□□ 0.28
TROAP-206ENST00000547923 RIMBP3CA6NJZ7 1639 aa16.78■□□□□ 0.28
TROAP-206ENST00000547923 RIMBP3BA6NNM3 1639 aa16.78■□□□□ 0.28
TROAP-206ENST00000547923 RIMBP3Q9UFD9 1639 aa16.78■□□□□ 0.28
TROAP-206ENST00000547923 RAPGEF2Q9Y4G8 1499 aa16.74■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms