RNA–Protein interactions for RNA: ENST00000547555.5

LETMD1-210, Transcript of LETM1 domain containing 1, humanhuman

TSL 5

Gene LETMD1, Length 1,658 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETMD1-210ENST00000547555 MYO5CQ9NQX4 1742 aa24.95■■□□□ 1.58
LETMD1-210ENST00000547555 NCOA2Q15596 1464 aa24.94■■□□□ 1.58
LETMD1-210ENST00000547555 PPRC1Q5VV67 1664 aaKnown RBP24.93■■□□□ 1.58
LETMD1-210ENST00000547555 CDC42BPAQ5VT25 1732 aa24.92■■□□□ 1.58
LETMD1-210ENST00000547555 CD109Q6YHK3 1445 aa24.91■■□□□ 1.58
LETMD1-210ENST00000547555 TRHP20396 242 aaPredicted RBP24.91■■□□□ 1.58
LETMD1-210ENST00000547555 PREX2Q70Z35 1606 aa24.91■■□□□ 1.58
LETMD1-210ENST00000547555 ARAP3Q8WWN8 1544 aa24.9■■□□□ 1.58
LETMD1-210ENST00000547555 TSPOAP1O95153 1857 aa24.9■■□□□ 1.58
LETMD1-210ENST00000547555 ITSN2Q9NZM3 1697 aa24.88■■□□□ 1.57
LETMD1-210ENST00000547555 CDC42BPBQ9Y5S2 1711 aa24.88■■□□□ 1.57
LETMD1-210ENST00000547555 PLCH2O75038 1416 aa24.86■■□□□ 1.57
LETMD1-210ENST00000547555 GPATCH8Q9UKJ3 1502 aaKnown RBP24.86■■□□□ 1.57
LETMD1-210ENST00000547555 CCNB3Q8WWL7 1395 aa24.83■■□□□ 1.57
LETMD1-210ENST00000547555 CFAP74Q9C0B2 1584 aa24.81■■□□□ 1.56
LETMD1-210ENST00000547555 TEX14Q8IWB6 1497 aa24.81■■□□□ 1.56
LETMD1-210ENST00000547555 MIER1Q8N108 512 aa24.8■■□□□ 1.56
LETMD1-210ENST00000547555 PHLDB1Q86UU1 1377 aa24.79■■□□□ 1.56
LETMD1-210ENST00000547555 ARHGAP5Q13017 1502 aa24.79■■□□□ 1.56
LETMD1-210ENST00000547555 MYOM3Q5VTT5 1437 aa24.78■■□□□ 1.56
LETMD1-210ENST00000547555 FANCAO15360 1455 aa24.77■■□□□ 1.56
LETMD1-210ENST00000547555 NEO1Q92859 1461 aa24.77■■□□□ 1.56
LETMD1-210ENST00000547555 MIA2Q96PC5 1412 aa24.74■■□□□ 1.55
LETMD1-210ENST00000547555 SAMD9LQ8IVG5 1584 aa24.73■■□□□ 1.55
LETMD1-210ENST00000547555 EFCAB2Q5VUJ9 269 aa24.71■■□□□ 1.55
LETMD1-210ENST00000547555 CFDP1Q9UEE9 299 aaPredicted RBP24.7■■□□□ 1.54
LETMD1-210ENST00000547555 FGD6Q6ZV73 1430 aa24.7■■□□□ 1.54
LETMD1-210ENST00000547555 ABCC1P33527 1531 aa24.69■■□□□ 1.54
LETMD1-210ENST00000547555 AKNAQ7Z591 1439 aa24.69■■□□□ 1.54
LETMD1-210ENST00000547555 PTPN23Q9H3S7 1636 aa24.67■■□□□ 1.54
LETMD1-210ENST00000547555 CAMSAP2Q08AD1 1489 aa24.65■■□□□ 1.54
LETMD1-210ENST00000547555 ADGRL1O94910 1474 aa24.65■■□□□ 1.54
LETMD1-210ENST00000547555 TCOF1Q13428 1488 aaKnown RBP24.65■■□□□ 1.54
LETMD1-210ENST00000547555 PLEKHH2Q8IVE3 1493 aa24.65■■□□□ 1.54
LETMD1-210ENST00000547555 KIAA1107Q9UPP5 1409 aa24.63■■□□□ 1.53
LETMD1-210ENST00000547555 SYCP2Q9BX26 1530 aa24.62■■□□□ 1.53
LETMD1-210ENST00000547555 ARHGEF12Q9NZN5 1544 aa24.61■■□□□ 1.53
LETMD1-210ENST00000547555 RICTORQ6R327 1708 aa24.6■■□□□ 1.53
LETMD1-210ENST00000547555 RRBP1Q9P2E9 1410 aaKnown RBP24.6■■□□□ 1.53
LETMD1-210ENST00000547555 ZNF644Q9H582 1327 aaPredicted RBP24.6■■□□□ 1.53
LETMD1-210ENST00000547555 KDM6BO15054 1643 aa24.59■■□□□ 1.53
LETMD1-210ENST00000547555 COL17A1Q9UMD9 1497 aaPredicted RBP24.59■■□□□ 1.53
LETMD1-210ENST00000547555 YTHDC1Q96MU7 727 aaKnown RBP24.59■■□□□ 1.53
LETMD1-210ENST00000547555 SCAPERQ9BY12 1400 aa24.59■■□□□ 1.53
LETMD1-210ENST00000547555 ZNF777Q9ULD5 760 aaPredicted RBP24.59■■□□□ 1.53
LETMD1-210ENST00000547555 FRMPD1Q5SYB0 1578 aa24.58■■□□□ 1.53
LETMD1-210ENST00000547555 DHX57Q6P158 1386 aaKnown RBP24.58■■□□□ 1.52
LETMD1-210ENST00000547555 DENND4BO75064 1496 aaPredicted RBP24.57■■□□□ 1.52
LETMD1-210ENST00000547555 MBD5Q9P267 1494 aa24.57■■□□□ 1.52
LETMD1-210ENST00000547555 ARHGEF5Q12774 1597 aa24.57■■□□□ 1.52
LETMD1-210ENST00000547555 POGZQ7Z3K3 1410 aa24.56■■□□□ 1.52
LETMD1-210ENST00000547555 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP24.54■■□□□ 1.52
LETMD1-210ENST00000547555 KDM5CP41229 1560 aa24.54■■□□□ 1.52
LETMD1-210ENST00000547555 ZNF518AQ6AHZ1 1483 aa24.53■■□□□ 1.52
LETMD1-210ENST00000547555 TRAPPC8Q9Y2L5 1435 aa24.53■■□□□ 1.52
LETMD1-210ENST00000547555 DNMT1P26358 1616 aaKnown RBP24.52■■□□□ 1.52
LETMD1-210ENST00000547555 ZMYM4Q5VZL5 1548 aa24.51■■□□□ 1.51
LETMD1-210ENST00000547555 CROCC2H7BZ55 1655 aa24.5■■□□□ 1.51
LETMD1-210ENST00000547555 CCDC141Q6ZP82 1450 aa24.5■■□□□ 1.51
LETMD1-210ENST00000547555 HNRNPMP52272 730 aaKnown RBP eCLIP24.49■■□□□ 1.51
LETMD1-210ENST00000547555 RAPGEF3O95398 923 aa24.46■■□□□ 1.51
LETMD1-210ENST00000547555 RSPH4AQ5TD94 716 aa24.46■■□□□ 1.51
LETMD1-210ENST00000547555 HECW2Q9P2P5 1572 aa24.44■■□□□ 1.5
LETMD1-210ENST00000547555 INO80Q9ULG1 1556 aaPredicted RBP24.44■■□□□ 1.5
LETMD1-210ENST00000547555 MAST1Q9Y2H9 1570 aa24.44■■□□□ 1.5
LETMD1-210ENST00000547555 DAPK1P53355 1430 aa24.44■■□□□ 1.5
LETMD1-210ENST00000547555 FAM50AQ14320 339 aaKnown RBP24.44■■□□□ 1.5
LETMD1-210ENST00000547555 ABCC5O15440 1437 aa24.44■■□□□ 1.5
LETMD1-210ENST00000547555 SHANK2Q9UPX8 1470 aa24.43■■□□□ 1.5
LETMD1-210ENST00000547555 AFAP1Q8N556 730 aa24.43■■□□□ 1.5
LETMD1-210ENST00000547555 SUPT16HQ9Y5B9 1047 aaKnown RBP24.43■■□□□ 1.5
LETMD1-210ENST00000547555 MLH3Q9UHC1 1453 aa24.42■■□□□ 1.5
LETMD1-210ENST00000547555 KIDINS220Q9ULH0 1771 aa24.42■■□□□ 1.5
LETMD1-210ENST00000547555 ZFYVE16Q7Z3T8 1539 aa24.41■■□□□ 1.5
LETMD1-210ENST00000547555 MAGI2Q86UL8 1455 aa24.41■■□□□ 1.5
LETMD1-210ENST00000547555 ATP7AQ04656 1500 aa24.39■■□□□ 1.5
LETMD1-210ENST00000547555 RTEL1-TNFRSF6BF6WH68 1400 aa24.38■■□□□ 1.49
LETMD1-210ENST00000547555 C9orf84Q5VXU9 1444 aa24.37■■□□□ 1.49
LETMD1-210ENST00000547555 ARHGEF40Q8TER5 1519 aa24.37■■□□□ 1.49
LETMD1-210ENST00000547555 ADGBQ8N7X0 1667 aa24.36■■□□□ 1.49
LETMD1-210ENST00000547555 SPAG9O60271 1321 aaKnown RBP24.35■■□□□ 1.49
LETMD1-210ENST00000547555 ABCA6Q8N139 1617 aa24.35■■□□□ 1.49
LETMD1-210ENST00000547555 PTPRKQ15262 1439 aa24.35■■□□□ 1.49
LETMD1-210ENST00000547555 PLXNC1O60486 1568 aa24.35■■□□□ 1.49
LETMD1-210ENST00000547555 DIP2CQ9Y2E4 1556 aa24.33■■□□□ 1.49
LETMD1-210ENST00000547555 ADGRL2O95490 1459 aa24.33■■□□□ 1.49
LETMD1-210ENST00000547555 TSPY4P0CV99 314 aa24.33■■□□□ 1.49
LETMD1-210ENST00000547555 TSPY10P0CW01 314 aa24.33■■□□□ 1.49
LETMD1-210ENST00000547555 YEATS2Q9ULM3 1422 aa24.32■■□□□ 1.48
LETMD1-210ENST00000547555 TIMELESSQ9UNS1 1208 aa24.32■■□□□ 1.48
LETMD1-210ENST00000547555 REREQ9P2R6 1566 aa24.28■■□□□ 1.48
LETMD1-210ENST00000547555 ROCK1Q13464 1354 aa24.26■■□□□ 1.47
LETMD1-210ENST00000547555 NCOA1Q15788 1441 aa24.25■■□□□ 1.47
LETMD1-210ENST00000547555 ATP10AO60312 1499 aa24.25■■□□□ 1.47
LETMD1-210ENST00000547555 ANKRD30AQ9BXX3 1397 aa24.24■■□□□ 1.47
LETMD1-210ENST00000547555 ITGAEP38570 1179 aa24.23■■□□□ 1.47
LETMD1-210ENST00000547555 CHIC2Q9UKJ5 165 aa24.21■■□□□ 1.47
LETMD1-210ENST00000547555 MYT1LQ9UL68 1186 aa24.21■■□□□ 1.47
LETMD1-210ENST00000547555 SIGLEC1Q9BZZ2 1709 aa24.21■■□□□ 1.47
LETMD1-210ENST00000547555 A2MP01023 1474 aa24.21■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 68.8 ms