RNA–Protein interactions for RNA: ENST00000547356.1

SMARCC2-204, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 2, humanhuman

TSL 2

Gene SMARCC2, Length 741 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2-204ENST00000547356 VPS8Q8N3P4 1428 aa37.26■■■■□ 3.55
SMARCC2-204ENST00000547356 CDC42BPBQ9Y5S2 1711 aa37.24■■■■□ 3.55
SMARCC2-204ENST00000547356 MTUS2Q5JR59 1369 aa37.24■■■■□ 3.55
SMARCC2-204ENST00000547356 PREX2Q70Z35 1606 aa37.24■■■■□ 3.55
SMARCC2-204ENST00000547356 POGZQ7Z3K3 1410 aa37.2■■■■□ 3.55
SMARCC2-204ENST00000547356 CDC42BPAQ5VT25 1732 aa37.19■■■■□ 3.54
SMARCC2-204ENST00000547356 ZMYM4Q5VZL5 1548 aa37.15■■■■□ 3.54
SMARCC2-204ENST00000547356 EHBP1L1Q8N3D4 1523 aa37.15■■■■□ 3.54
SMARCC2-204ENST00000547356 GPATCH8Q9UKJ3 1502 aaKnown RBP37.14■■■■□ 3.54
SMARCC2-204ENST00000547356 ARHGEF40Q8TER5 1519 aa37.13■■■■□ 3.53
SMARCC2-204ENST00000547356 YEATS2Q9ULM3 1422 aa37.11■■■■□ 3.53
SMARCC2-204ENST00000547356 TIAM1Q13009 1591 aa37.1■■■■□ 3.53
SMARCC2-204ENST00000547356 ARHGEF12Q9NZN5 1544 aa37.08■■■■□ 3.53
SMARCC2-204ENST00000547356 CCNB3Q8WWL7 1395 aa37.07■■■■□ 3.53
SMARCC2-204ENST00000547356 ABCC1P33527 1531 aa37.07■■■■□ 3.53
SMARCC2-204ENST00000547356 ZFYVE16Q7Z3T8 1539 aa37.07■■■■□ 3.53
SMARCC2-204ENST00000547356 ZNF777Q9ULD5 760 aaPredicted RBP37.07■■■■□ 3.52
SMARCC2-204ENST00000547356 AFAP1Q8N556 730 aa37.06■■■■□ 3.52
SMARCC2-204ENST00000547356 TRAPPC8Q9Y2L5 1435 aa37.02■■■■□ 3.52
SMARCC2-204ENST00000547356 ZNF518AQ6AHZ1 1483 aa37.02■■■■□ 3.52
SMARCC2-204ENST00000547356 SAMD9LQ8IVG5 1584 aa37.02■■■■□ 3.52
SMARCC2-204ENST00000547356 MAGI2Q86UL8 1455 aa37.01■■■■□ 3.52
SMARCC2-204ENST00000547356 ITSN2Q9NZM3 1697 aa36.99■■■■□ 3.51
SMARCC2-204ENST00000547356 CFDP1Q9UEE9 299 aaPredicted RBP36.99■■■■□ 3.51
SMARCC2-204ENST00000547356 ARID4BQ4LE39 1312 aaPredicted RBP36.99■■■■□ 3.51
SMARCC2-204ENST00000547356 KDM5CP41229 1560 aa36.99■■■■□ 3.51
SMARCC2-204ENST00000547356 SIGLEC1Q9BZZ2 1709 aa36.96■■■■□ 3.51
SMARCC2-204ENST00000547356 NCOA2Q15596 1464 aa36.95■■■■□ 3.51
SMARCC2-204ENST00000547356 LRRC9Q6ZRR7 1453 aa36.94■■■■□ 3.5
SMARCC2-204ENST00000547356 KANK4Q5T7N3 995 aaPredicted RBP36.94■■■■□ 3.5
SMARCC2-204ENST00000547356 SYCP2Q9BX26 1530 aa36.94■■■■□ 3.5
SMARCC2-204ENST00000547356 SUPT6HQ7KZ85 1726 aaKnown RBP36.93■■■■□ 3.5
SMARCC2-204ENST00000547356 HNRNPMP52272 730 aaKnown RBP eCLIP36.9■■■■□ 3.5
SMARCC2-204ENST00000547356 MYT1LQ9UL68 1186 aa36.9■■■■□ 3.5
SMARCC2-204ENST00000547356 HECW2Q9P2P5 1572 aa36.9■■■■□ 3.5
SMARCC2-204ENST00000547356 ZNF644Q9H582 1327 aaPredicted RBP36.89■■■■□ 3.5
SMARCC2-204ENST00000547356 MAP3K1Q13233 1512 aa36.89■■■■□ 3.5
SMARCC2-204ENST00000547356 BCORL1Q5H9F3 1711 aa36.88■■■■□ 3.49
SMARCC2-204ENST00000547356 ADAMTSL3P82987 1691 aa36.87■■■■□ 3.49
SMARCC2-204ENST00000547356 ATP10AO60312 1499 aa36.87■■■■□ 3.49
SMARCC2-204ENST00000547356 MLH3Q9UHC1 1453 aa36.84■■■■□ 3.49
SMARCC2-204ENST00000547356 C9orf84Q5VXU9 1444 aa36.83■■■■□ 3.49
SMARCC2-204ENST00000547356 DIP2CQ9Y2E4 1556 aa36.83■■■■□ 3.49
SMARCC2-204ENST00000547356 KIAA1107Q9UPP5 1409 aa36.82■■■■□ 3.48
SMARCC2-204ENST00000547356 PLEKHH2Q8IVE3 1493 aa36.82■■■■□ 3.48
SMARCC2-204ENST00000547356 ABCA6Q8N139 1617 aa36.81■■■■□ 3.48
SMARCC2-204ENST00000547356 MADDQ8WXG6 1647 aa36.79■■■■□ 3.48
SMARCC2-204ENST00000547356 MLECQ14165 292 aa36.78■■■■□ 3.48
SMARCC2-204ENST00000547356 KIDINS220Q9ULH0 1771 aa36.77■■■■□ 3.48
SMARCC2-204ENST00000547356 APLP2Q06481 763 aa36.74■■■■□ 3.47
SMARCC2-204ENST00000547356 SPAG9O60271 1321 aaKnown RBP36.72■■■■□ 3.47
SMARCC2-204ENST00000547356 PTPRMP28827 1452 aa36.71■■■■□ 3.47
SMARCC2-204ENST00000547356 CAMSAP2Q08AD1 1489 aa36.71■■■■□ 3.47
SMARCC2-204ENST00000547356 MBD5Q9P267 1494 aa36.71■■■■□ 3.47
SMARCC2-204ENST00000547356 RIMS1Q86UR5 1692 aaKnown RBP36.67■■■■□ 3.46
SMARCC2-204ENST00000547356 ATP7AQ04656 1500 aa36.66■■■■□ 3.46
SMARCC2-204ENST00000547356 REREQ9P2R6 1566 aa36.66■■■■□ 3.46
SMARCC2-204ENST00000547356 INO80Q9ULG1 1556 aaPredicted RBP36.66■■■■□ 3.46
SMARCC2-204ENST00000547356 MYOM3Q5VTT5 1437 aa36.6■■■■□ 3.45
SMARCC2-204ENST00000547356 PLPPR3Q6T4P5 718 aa36.58■■■■□ 3.45
SMARCC2-204ENST00000547356 FER1L4A9Z1Z3 1794 aa36.57■■■■□ 3.44
SMARCC2-204ENST00000547356 CCDC141Q6ZP82 1450 aa36.56■■■■□ 3.44
SMARCC2-204ENST00000547356 AGLP35573 1532 aa36.55■■■■□ 3.44
SMARCC2-204ENST00000547356 MIA2Q96PC5 1412 aa36.51■■■■□ 3.44
SMARCC2-204ENST00000547356 A2MP01023 1474 aa36.49■■■■□ 3.43
SMARCC2-204ENST00000547356 ARHGEF5Q12774 1597 aa36.49■■■■□ 3.43
SMARCC2-204ENST00000547356 RTEL1-TNFRSF6BF6WH68 1400 aa36.47■■■■□ 3.43
SMARCC2-204ENST00000547356 PLXNC1O60486 1568 aa36.46■■■■□ 3.43
SMARCC2-204ENST00000547356 RSPH4AQ5TD94 716 aa36.43■■■■□ 3.42
SMARCC2-204ENST00000547356 ADGBQ8N7X0 1667 aa36.42■■■■□ 3.42
SMARCC2-204ENST00000547356 CEBPAP49715 358 aaPredicted RBP36.4■■■■□ 3.42
SMARCC2-204ENST00000547356 PTPN23Q9H3S7 1636 aa36.39■■■■□ 3.42
SMARCC2-204ENST00000547356 FGD6Q6ZV73 1430 aa36.38■■■■□ 3.41
SMARCC2-204ENST00000547356 TSPY4P0CV99 314 aa36.36■■■■□ 3.41
SMARCC2-204ENST00000547356 TSPY10P0CW01 314 aa36.36■■■■□ 3.41
SMARCC2-204ENST00000547356 DHX29Q7Z478 1369 aaKnown RBP36.32■■■■□ 3.4
SMARCC2-204ENST00000547356 PPARGC1BQ86YN6 1023 aaKnown RBP36.3■■■■□ 3.4
SMARCC2-204ENST00000547356 ESF1Q9H501 851 aaKnown RBP36.3■■■■□ 3.4
SMARCC2-204ENST00000547356 MAST1Q9Y2H9 1570 aa36.3■■■■□ 3.4
SMARCC2-204ENST00000547356 TCOF1Q13428 1488 aaKnown RBP36.3■■■■□ 3.4
SMARCC2-204ENST00000547356 GGT6Q6P531 493 aa36.29■■■■□ 3.4
SMARCC2-204ENST00000547356 LMTK3Q96Q04 1460 aa36.28■■■■□ 3.4
SMARCC2-204ENST00000547356 ABCC5O15440 1437 aa36.27■■■■□ 3.4
SMARCC2-204ENST00000547356 C3P01024 1663 aa36.25■■■■□ 3.39
SMARCC2-204ENST00000547356 KIF3BO15066 747 aa36.22■■■■□ 3.39
SMARCC2-204ENST00000547356 CNTLNQ9NXG0 1405 aa36.22■■■■□ 3.39
SMARCC2-204ENST00000547356 CROCC2H7BZ55 1655 aa36.21■■■■□ 3.39
SMARCC2-204ENST00000547356 DAPK1P53355 1430 aa36.21■■■■□ 3.39
SMARCC2-204ENST00000547356 CLTCQ00610 1675 aaKnown RBP36.19■■■■□ 3.38
SMARCC2-204ENST00000547356 DNMT1P26358 1616 aaKnown RBP36.19■■■■□ 3.38
SMARCC2-204ENST00000547356 SHANK2Q9UPX8 1470 aa36.17■■■■□ 3.38
SMARCC2-204ENST00000547356 HSPA2P54652 639 aa36.16■■■■□ 3.38
SMARCC2-204ENST00000547356 FAM50AQ14320 339 aaKnown RBP36.16■■■■□ 3.38
SMARCC2-204ENST00000547356 ZMYM3Q14202 1370 aa36.15■■■■□ 3.38
SMARCC2-204ENST00000547356 MROH2AA6NES4 1674 aa36.13■■■■□ 3.37
SMARCC2-204ENST00000547356 CHIC2Q9UKJ5 165 aa36.11■■■■□ 3.37
SMARCC2-204ENST00000547356 PREX1Q8TCU6 1659 aa36.1■■■■□ 3.37
SMARCC2-204ENST00000547356 RRP7BPQ9NSQ0 103 aa36.09■■■■□ 3.37
SMARCC2-204ENST00000547356 KIF15Q9NS87 1388 aa36.08■■■■□ 3.37
SMARCC2-204ENST00000547356 PPP6R1Q9UPN7 881 aa36.06■■■■□ 3.36
Retrieved 100 of 20,778 RNA–protein pairs in 8.7 ms