RNA–Protein interactions for RNA: ENST00000547247.5

SMARCD1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 1 (best)

Gene SMARCD1, Length 1,584 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-203ENST00000547247 ARHGAP5Q13017 1502 aa35.97■■■■□ 3.35
SMARCD1-203ENST00000547247 NEO1Q92859 1461 aa35.95■■■■□ 3.35
SMARCD1-203ENST00000547247 CDC42BPBQ9Y5S2 1711 aa35.95■■■■□ 3.35
SMARCD1-203ENST00000547247 PPARGC1BQ86YN6 1023 aaKnown RBP35.94■■■■□ 3.34
SMARCD1-203ENST00000547247 PHLDB1Q86UU1 1377 aa35.93■■■■□ 3.34
SMARCD1-203ENST00000547247 CFAP74Q9C0B2 1584 aa35.93■■■■□ 3.34
SMARCD1-203ENST00000547247 CFDP1Q9UEE9 299 aaPredicted RBP35.92■■■■□ 3.34
SMARCD1-203ENST00000547247 ITSN2Q9NZM3 1697 aa35.91■■■■□ 3.34
SMARCD1-203ENST00000547247 COL17A1Q9UMD9 1497 aaPredicted RBP35.9■■■■□ 3.34
SMARCD1-203ENST00000547247 AKNAQ7Z591 1439 aa35.88■■■■□ 3.33
SMARCD1-203ENST00000547247 MYOM3Q5VTT5 1437 aa35.85■■■■□ 3.33
SMARCD1-203ENST00000547247 ZNF777Q9ULD5 760 aaPredicted RBP35.84■■■■□ 3.33
SMARCD1-203ENST00000547247 ADGRL1O94910 1474 aa35.8■■■■□ 3.32
SMARCD1-203ENST00000547247 MIA2Q96PC5 1412 aa35.77■■■■□ 3.32
SMARCD1-203ENST00000547247 SCAPERQ9BY12 1400 aa35.75■■■■□ 3.31
SMARCD1-203ENST00000547247 SAMD9LQ8IVG5 1584 aa35.75■■■■□ 3.31
SMARCD1-203ENST00000547247 ZNF644Q9H582 1327 aaPredicted RBP35.72■■■■□ 3.31
SMARCD1-203ENST00000547247 DENND4BO75064 1496 aaPredicted RBP35.72■■■■□ 3.31
SMARCD1-203ENST00000547247 PLEKHH2Q8IVE3 1493 aa35.72■■■■□ 3.31
SMARCD1-203ENST00000547247 ABCC1P33527 1531 aa35.71■■■■□ 3.31
SMARCD1-203ENST00000547247 FGD6Q6ZV73 1430 aa35.69■■■■□ 3.3
SMARCD1-203ENST00000547247 KIAA1107Q9UPP5 1409 aa35.68■■■■□ 3.3
SMARCD1-203ENST00000547247 RAPGEF3O95398 923 aa35.68■■■■□ 3.3
SMARCD1-203ENST00000547247 CAMSAP2Q08AD1 1489 aa35.67■■■■□ 3.3
SMARCD1-203ENST00000547247 ARHGEF12Q9NZN5 1544 aa35.65■■■■□ 3.3
SMARCD1-203ENST00000547247 HNRNPMP52272 730 aaKnown RBP eCLIP35.64■■■■□ 3.3
SMARCD1-203ENST00000547247 SYCP2Q9BX26 1530 aa35.64■■■■□ 3.3
SMARCD1-203ENST00000547247 POGZQ7Z3K3 1410 aa35.63■■■■□ 3.29
SMARCD1-203ENST00000547247 FRMPD1Q5SYB0 1578 aa35.62■■■■□ 3.29
SMARCD1-203ENST00000547247 PTPN23Q9H3S7 1636 aa35.61■■■■□ 3.29
SMARCD1-203ENST00000547247 RICTORQ6R327 1708 aa35.6■■■■□ 3.29
SMARCD1-203ENST00000547247 ZNF518AQ6AHZ1 1483 aa35.6■■■■□ 3.29
SMARCD1-203ENST00000547247 TRAPPC8Q9Y2L5 1435 aa35.59■■■■□ 3.29
SMARCD1-203ENST00000547247 AFAP1Q8N556 730 aa35.57■■■■□ 3.28
SMARCD1-203ENST00000547247 TCOF1Q13428 1488 aaKnown RBP35.57■■■■□ 3.28
SMARCD1-203ENST00000547247 MBD5Q9P267 1494 aa35.56■■■■□ 3.28
SMARCD1-203ENST00000547247 RSPH4AQ5TD94 716 aa35.54■■■■□ 3.28
SMARCD1-203ENST00000547247 FAM50AQ14320 339 aaKnown RBP35.51■■■■□ 3.28
SMARCD1-203ENST00000547247 KDM5CP41229 1560 aa35.5■■■■□ 3.27
SMARCD1-203ENST00000547247 ARHGEF5Q12774 1597 aa35.49■■■■□ 3.27
SMARCD1-203ENST00000547247 ZMYM4Q5VZL5 1548 aa35.49■■■■□ 3.27
SMARCD1-203ENST00000547247 CCDC141Q6ZP82 1450 aa35.48■■■■□ 3.27
SMARCD1-203ENST00000547247 RRBP1Q9P2E9 1410 aaKnown RBP35.46■■■■□ 3.27
SMARCD1-203ENST00000547247 MAGI2Q86UL8 1455 aa35.44■■■■□ 3.26
SMARCD1-203ENST00000547247 MYT1LQ9UL68 1186 aa35.43■■■■□ 3.26
SMARCD1-203ENST00000547247 SPAG9O60271 1321 aaKnown RBP35.43■■■■□ 3.26
SMARCD1-203ENST00000547247 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP35.42■■■■□ 3.267e-6■■■□□ 16.5
SMARCD1-203ENST00000547247 MLH3Q9UHC1 1453 aa35.41■■■■□ 3.26
SMARCD1-203ENST00000547247 TSPY4P0CV99 314 aa35.41■■■■□ 3.26
SMARCD1-203ENST00000547247 TSPY10P0CW01 314 aa35.41■■■■□ 3.26
SMARCD1-203ENST00000547247 HECW2Q9P2P5 1572 aa35.41■■■■□ 3.26
SMARCD1-203ENST00000547247 DNMT1P26358 1616 aaKnown RBP35.37■■■■□ 3.25
SMARCD1-203ENST00000547247 ABCC5O15440 1437 aa35.37■■■■□ 3.25
SMARCD1-203ENST00000547247 DAPK1P53355 1430 aa35.37■■■■□ 3.25
SMARCD1-203ENST00000547247 ZFYVE16Q7Z3T8 1539 aa35.36■■■■□ 3.25
SMARCD1-203ENST00000547247 ARHGEF40Q8TER5 1519 aa35.36■■■■□ 3.25
SMARCD1-203ENST00000547247 YEATS2Q9ULM3 1422 aa35.35■■■■□ 3.25
SMARCD1-203ENST00000547247 RTEL1-TNFRSF6BF6WH68 1400 aa35.33■■■■□ 3.25
SMARCD1-203ENST00000547247 ATP7AQ04656 1500 aa35.33■■■■□ 3.25
SMARCD1-203ENST00000547247 KIDINS220Q9ULH0 1771 aa35.33■■■■□ 3.25
SMARCD1-203ENST00000547247 INO80Q9ULG1 1556 aaPredicted RBP35.32■■■■□ 3.24
SMARCD1-203ENST00000547247 C9orf84Q5VXU9 1444 aa35.3■■■■□ 3.24
SMARCD1-203ENST00000547247 CROCC2H7BZ55 1655 aa35.29■■■■□ 3.24
SMARCD1-203ENST00000547247 SHANK2Q9UPX8 1470 aa35.29■■■■□ 3.24
SMARCD1-203ENST00000547247 MAST1Q9Y2H9 1570 aa35.28■■■■□ 3.24
SMARCD1-203ENST00000547247 ATP10AO60312 1499 aa35.24■■■■□ 3.23
SMARCD1-203ENST00000547247 ABCA6Q8N139 1617 aa35.24■■■■□ 3.23
SMARCD1-203ENST00000547247 ITGAEP38570 1179 aa35.24■■■■□ 3.23
SMARCD1-203ENST00000547247 DIP2CQ9Y2E4 1556 aa35.24■■■■□ 3.23
SMARCD1-203ENST00000547247 CHIC2Q9UKJ5 165 aa35.22■■■■□ 3.23
SMARCD1-203ENST00000547247 PTPRKQ15262 1439 aa35.19■■■■□ 3.22
SMARCD1-203ENST00000547247 KDM4FA0A1W2PPD8 638 aa35.17■■■■□ 3.22
SMARCD1-203ENST00000547247 ANKRD30AQ9BXX3 1397 aa35.15■■■■□ 3.22
SMARCD1-203ENST00000547247 SIGLEC1Q9BZZ2 1709 aa35.14■■■■□ 3.22
SMARCD1-203ENST00000547247 PLXNC1O60486 1568 aa35.14■■■■□ 3.22
SMARCD1-203ENST00000547247 ADGBQ8N7X0 1667 aa35.13■■■■□ 3.21
SMARCD1-203ENST00000547247 REREQ9P2R6 1566 aa35.13■■■■□ 3.21
SMARCD1-203ENST00000547247 ADGRL2O95490 1459 aa35.12■■■■□ 3.21
SMARCD1-203ENST00000547247 A2MP01023 1474 aa35.12■■■■□ 3.21
SMARCD1-203ENST00000547247 NCOA1Q15788 1441 aa35.11■■■■□ 3.21
SMARCD1-203ENST00000547247 ARID4BQ4LE39 1312 aaPredicted RBP35.11■■■■□ 3.21
SMARCD1-203ENST00000547247 RRP7BPQ9NSQ0 103 aa35.1■■■■□ 3.21
SMARCD1-203ENST00000547247 DHX29Q7Z478 1369 aaKnown RBP35.09■■■■□ 3.21
SMARCD1-203ENST00000547247 KIF15Q9NS87 1388 aa35.09■■■■□ 3.21
SMARCD1-203ENST00000547247 ROCK1Q13464 1354 aa35.07■■■■□ 3.2
SMARCD1-203ENST00000547247 BCORL1Q5H9F3 1711 aa35.06■■■■□ 3.2
SMARCD1-203ENST00000547247 DUOX2Q9NRD8 1548 aa35.03■■■■□ 3.2
SMARCD1-203ENST00000547247 AEBP2Q6ZN18 517 aaPredicted RBP35.02■■■■□ 3.2
SMARCD1-203ENST00000547247 AGLP35573 1532 aa35.02■■■■□ 3.2
SMARCD1-203ENST00000547247 ADAMTSL3P82987 1691 aa34.99■■■■□ 3.19
SMARCD1-203ENST00000547247 ERBINQ96RT1 1412 aa34.94■■■■□ 3.18
SMARCD1-203ENST00000547247 KIF3BO15066 747 aa34.93■■■■□ 3.18
SMARCD1-203ENST00000547247 MLECQ14165 292 aa34.92■■■■□ 3.18
SMARCD1-203ENST00000547247 MADDQ8WXG6 1647 aa34.92■■■■□ 3.18
SMARCD1-203ENST00000547247 ANKRD50Q9ULJ7 1429 aa34.9■■■■□ 3.18
SMARCD1-203ENST00000547247 EIF2AK4Q9P2K8 1649 aaKnown RBP34.89■■■■□ 3.18
SMARCD1-203ENST00000547247 TRIM26Q12899 539 aaPredicted RBP34.87■■■■□ 3.17
SMARCD1-203ENST00000547247 GGT6Q6P531 493 aa34.86■■■■□ 3.17
SMARCD1-203ENST00000547247 HFM1A2PYH4 1435 aa34.85■■■■□ 3.17
SMARCD1-203ENST00000547247 NAIPQ13075 1403 aa34.85■■■■□ 3.17
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms