RNA–Protein interactions for RNA: ENST00000545021.2

LYSMD4-210, Transcript of LysM domain containing 4, humanhuman

TSL 4 BASIC

Gene LYSMD4, Length 2,431 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD4-210ENST00000545021 PPRC1Q5VV67 1664 aaKnown RBP26.55■■□□□ 1.84
LYSMD4-210ENST00000545021 CFAP43Q8NDM7 1665 aa26.53■■□□□ 1.84
LYSMD4-210ENST00000545021 FAM69CQ0P6D2 419 aa26.53■■□□□ 1.84
LYSMD4-210ENST00000545021 PAK3O75914 559 aaPredicted RBP26.52■■□□□ 1.84
LYSMD4-210ENST00000545021 IRX6P78412 446 aaPredicted RBP26.52■■□□□ 1.84
LYSMD4-210ENST00000545021 CCDC136Q96JN2 1154 aa26.52■■□□□ 1.84
LYSMD4-210ENST00000545021 RTL5Q5HYW3 569 aaPredicted RBP26.5■■□□□ 1.83
LYSMD4-210ENST00000545021 ATP10BO94823 1461 aa26.5■■□□□ 1.83
LYSMD4-210ENST00000545021 FHOD3Q2V2M9 1422 aa26.49■■□□□ 1.83
LYSMD4-210ENST00000545021 CCNB3Q8WWL7 1395 aa26.49■■□□□ 1.83
LYSMD4-210ENST00000545021 NUP153P49790 1475 aaKnown RBP26.48■■□□□ 1.83
LYSMD4-210ENST00000545021 ARHGAP35Q9NRY4 1499 aa26.48■■□□□ 1.83
LYSMD4-210ENST00000545021 IL27Q8NEV9 243 aa26.48■■□□□ 1.83
LYSMD4-210ENST00000545021 RAB3GAP2Q9H2M9 1393 aa26.47■■□□□ 1.83
LYSMD4-210ENST00000545021 TIMELESSQ9UNS1 1208 aa26.46■■□□□ 1.83
LYSMD4-210ENST00000545021 FMN1Q68DA7 1419 aa26.45■■□□□ 1.82
LYSMD4-210ENST00000545021 KANK4Q5T7N3 995 aaPredicted RBP26.45■■□□□ 1.82
LYSMD4-210ENST00000545021 TEX14Q8IWB6 1497 aa26.44■■□□□ 1.82
LYSMD4-210ENST00000545021 MAGI3Q5TCQ9 1506 aa26.43■■□□□ 1.82
LYSMD4-210ENST00000545021 HECW1Q76N89 1606 aa26.42■■□□□ 1.82
LYSMD4-210ENST00000545021 HNRNPUQ00839 825 aaKnown RBP eCLIP26.41■■□□□ 1.82
LYSMD4-210ENST00000545021 ABCA9Q8IUA7 1624 aa26.41■■□□□ 1.82
LYSMD4-210ENST00000545021 TSPOAP1O95153 1857 aa26.38■■□□□ 1.81
LYSMD4-210ENST00000545021 KDM6BO15054 1643 aa26.38■■□□□ 1.81
LYSMD4-210ENST00000545021 P3H3Q8IVL6 736 aa26.36■■□□□ 1.81
LYSMD4-210ENST00000545021 IPO9Q96P70 1041 aaKnown RBP26.36■■□□□ 1.81
LYSMD4-210ENST00000545021 WASHC2AQ641Q2 1341 aa26.33■■□□□ 1.81
LYSMD4-210ENST00000545021 ZBTB4Q9P1Z0 1013 aaPredicted RBP26.32■■□□□ 1.8
LYSMD4-210ENST00000545021 ANP32AP39687 249 aaKnown RBP26.31■■□□□ 1.8
LYSMD4-210ENST00000545021 B4GALNT3Q6L9W6 998 aa26.3■■□□□ 1.8
LYSMD4-210ENST00000545021 SETD5Q9C0A6 1442 aa26.3■■□□□ 1.8
LYSMD4-210ENST00000545021 RTN4Q9NQC3 1192 aaKnown RBP26.29■■□□□ 1.8
LYSMD4-210ENST00000545021 PHLDB1Q86UU1 1377 aa26.27■■□□□ 1.8
LYSMD4-210ENST00000545021 C11orf95C9JLR9 678 aaPredicted RBP26.27■■□□□ 1.8
LYSMD4-210ENST00000545021 RANGAP1P46060 587 aaPredicted RBP26.26■■□□□ 1.79
LYSMD4-210ENST00000545021 SIN3AQ96ST3 1273 aa26.26■■□□□ 1.79
LYSMD4-210ENST00000545021 ZBTB47Q9UFB7 747 aaPredicted RBP26.26■■□□□ 1.79
LYSMD4-210ENST00000545021 CD109Q6YHK3 1445 aa26.26■■□□□ 1.79
LYSMD4-210ENST00000545021 CASKIN1Q8WXD9 1431 aa26.25■■□□□ 1.79
LYSMD4-210ENST00000545021 HIRIP3Q9BW71 556 aaPredicted RBP26.24■■□□□ 1.79
LYSMD4-210ENST00000545021 CCDC18Q5T9S5 1454 aa26.22■■□□□ 1.79
LYSMD4-210ENST00000545021 FYCO1Q9BQS8 1478 aa26.21■■□□□ 1.79
LYSMD4-210ENST00000545021 CFAP74Q9C0B2 1584 aa26.21■■□□□ 1.79
LYSMD4-210ENST00000545021 ARAP3Q8WWN8 1544 aa26.2■■□□□ 1.79
LYSMD4-210ENST00000545021 NEO1Q92859 1461 aa26.2■■□□□ 1.78
LYSMD4-210ENST00000545021 PCF11O94913 1555 aaKnown RBP26.2■■□□□ 1.78
LYSMD4-210ENST00000545021 LRRIQ1Q96JM4 1722 aa26.2■■□□□ 1.78
LYSMD4-210ENST00000545021 USP35Q9P2H5 1018 aa26.18■■□□□ 1.78
LYSMD4-210ENST00000545021 WASHC2CQ9Y4E1 1318 aa26.18■■□□□ 1.78
LYSMD4-210ENST00000545021 CDK13Q14004 1512 aaKnown RBP26.17■■□□□ 1.78
LYSMD4-210ENST00000545021 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP26.14■■□□□ 1.77
LYSMD4-210ENST00000545021 PLEKHD1A6NEE1 506 aa26.14■■□□□ 1.77
LYSMD4-210ENST00000545021 TROQ12816 1431 aaPredicted RBP26.09■■□□□ 1.77
LYSMD4-210ENST00000545021 COL17A1Q9UMD9 1497 aaPredicted RBP26.09■■□□□ 1.77
LYSMD4-210ENST00000545021 TTC37Q6PGP7 1564 aa26.09■■□□□ 1.77
LYSMD4-210ENST00000545021 KIF14Q15058 1648 aa26.09■■□□□ 1.77
LYSMD4-210ENST00000545021 ZBED9Q6R2W3 1325 aa26.06■■□□□ 1.76
LYSMD4-210ENST00000545021 MYO5CQ9NQX4 1742 aa26.05■■□□□ 1.76
LYSMD4-210ENST00000545021 MAP3K1Q13233 1512 aa26.01■■□□□ 1.75
LYSMD4-210ENST00000545021 PLCH2O75038 1416 aa26■■□□□ 1.75
LYSMD4-210ENST00000545021 ARID3CA6NKF2 412 aa25.99■■□□□ 1.75
LYSMD4-210ENST00000545021 NEFMP07197 916 aa25.99■■□□□ 1.75
LYSMD4-210ENST00000545021 FRMPD1Q5SYB0 1578 aa25.98■■□□□ 1.75
LYSMD4-210ENST00000545021 TONSLQ96HA7 1378 aa25.97■■□□□ 1.75
LYSMD4-210ENST00000545021 ZMYM4Q5VZL5 1548 aa25.96■■□□□ 1.75
LYSMD4-210ENST00000545021 RICTORQ6R327 1708 aa25.96■■□□□ 1.75
LYSMD4-210ENST00000545021 FANCAO15360 1455 aa25.94■■□□□ 1.74
LYSMD4-210ENST00000545021 PREX2Q70Z35 1606 aa25.94■■□□□ 1.74
LYSMD4-210ENST00000545021 TIAM1Q13009 1591 aa25.93■■□□□ 1.74
LYSMD4-210ENST00000545021 PPM1GO15355 546 aaPredicted RBP25.93■■□□□ 1.74
LYSMD4-210ENST00000545021 EIF5BO60841 1220 aaKnown RBP25.93■■□□□ 1.74
LYSMD4-210ENST00000545021 AKNAQ7Z591 1439 aa25.92■■□□□ 1.74
LYSMD4-210ENST00000545021 NCOA2Q15596 1464 aa25.91■■□□□ 1.74
LYSMD4-210ENST00000545021 PKNOX2Q96KN3 472 aa25.9■■□□□ 1.74
LYSMD4-210ENST00000545021 BRPF3Q9ULD4 1205 aa25.89■■□□□ 1.73
LYSMD4-210ENST00000545021 RNF123Q5XPI4 1314 aa25.89■■□□□ 1.73
LYSMD4-210ENST00000545021 DENND4BO75064 1496 aaPredicted RBP25.89■■□□□ 1.73
LYSMD4-210ENST00000545021 SMG6Q86US8 1419 aaKnown RBP25.88■■□□□ 1.73
LYSMD4-210ENST00000545021 EHBP1L1Q8N3D4 1523 aa25.87■■□□□ 1.73
LYSMD4-210ENST00000545021 RSPH6AQ9H0K4 717 aa25.86■■□□□ 1.73
LYSMD4-210ENST00000545021 CDC42BPBQ9Y5S2 1711 aa25.86■■□□□ 1.73
LYSMD4-210ENST00000545021 CNTLNQ9NXG0 1405 aa25.86■■□□□ 1.73
LYSMD4-210ENST00000545021 CCDC184Q52MB2 194 aa25.86■■□□□ 1.73
LYSMD4-210ENST00000545021 MAGI2Q86UL8 1455 aa25.86■■□□□ 1.73
LYSMD4-210ENST00000545021 ARHGEF40Q8TER5 1519 aa25.85■■□□□ 1.73
LYSMD4-210ENST00000545021 LAS1LQ9Y4W2 734 aaKnown RBP25.85■■□□□ 1.73
LYSMD4-210ENST00000545021 CDC42BPAQ5VT25 1732 aa25.84■■□□□ 1.73
LYSMD4-210ENST00000545021 LRRC9Q6ZRR7 1453 aa25.82■■□□□ 1.72
LYSMD4-210ENST00000545021 GSE1Q14687 1217 aa25.82■■□□□ 1.72
LYSMD4-210ENST00000545021 POGZQ7Z3K3 1410 aa25.81■■□□□ 1.72
LYSMD4-210ENST00000545021 ATP1B4Q9UN42 357 aaPredicted RBP25.8■■□□□ 1.72
LYSMD4-210ENST00000545021 ADGRL1O94910 1474 aa25.8■■□□□ 1.72
LYSMD4-210ENST00000545021 FAM9BQ8IZU0 186 aa25.8■■□□□ 1.72
LYSMD4-210ENST00000545021 KDM5CP41229 1560 aa25.78■■□□□ 1.72
LYSMD4-210ENST00000545021 EFCAB2Q5VUJ9 269 aa25.78■■□□□ 1.72
LYSMD4-210ENST00000545021 ARHGAP5Q13017 1502 aa25.78■■□□□ 1.72
LYSMD4-210ENST00000545021 ITSN2Q9NZM3 1697 aa25.78■■□□□ 1.72
LYSMD4-210ENST00000545021 PRKRIP1Q9H875 184 aaPredicted RBP25.77■■□□□ 1.72
LYSMD4-210ENST00000545021 ABCC1P33527 1531 aa25.77■■□□□ 1.72
LYSMD4-210ENST00000545021 MRS2Q9HD23 443 aa25.76■■□□□ 1.71
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms