RNA–Protein interactions for RNA: ENST00000544891.6

NECAP1-207, Transcript of NECAP endocytosis associated 1, humanhuman

TSL 5

Gene NECAP1, Length 4,899 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-207ENST00000544891 ANP32EQ9BTT0 268 aa11.91□□□□□ -0.5
NECAP1-207ENST00000544891 CFDP1Q9UEE9 299 aaPredicted RBP11.9□□□□□ -0.5
NECAP1-207ENST00000544891 BCL11AQ9H165 835 aa11.89□□□□□ -0.51
NECAP1-207ENST00000544891 KDM2AQ9Y2K7 1162 aa11.89□□□□□ -0.51
NECAP1-207ENST00000544891 LRRIQ1Q96JM4 1722 aa11.88□□□□□ -0.51
NECAP1-207ENST00000544891 KANK4Q5T7N3 995 aaPredicted RBP11.87□□□□□ -0.51
NECAP1-207ENST00000544891 RAPGEF6Q8TEU7 1601 aa11.87□□□□□ -0.51
NECAP1-207ENST00000544891 PPP1R15AO75807 674 aaPredicted RBP11.87□□□□□ -0.51
NECAP1-207ENST00000544891 ZNF608Q9ULD9 1512 aaPredicted RBP11.86□□□□□ -0.51
NECAP1-207ENST00000544891 DDRGK1Q96HY6 314 aa11.85□□□□□ -0.51
NECAP1-207ENST00000544891 ARXQ96QS3 562 aa11.85□□□□□ -0.51
NECAP1-207ENST00000544891 RRP7BPQ9NSQ0 103 aa11.85□□□□□ -0.51
NECAP1-207ENST00000544891 DNAJC5BQ9UF47 199 aa11.85□□□□□ -0.51
NECAP1-207ENST00000544891 ARHGEF11O15085 1522 aa11.85□□□□□ -0.51
NECAP1-207ENST00000544891 CHMP4BQ9H444 224 aaKnown RBP11.85□□□□□ -0.51
NECAP1-207ENST00000544891 CEP170Q5SW79 1584 aa11.85□□□□□ -0.51
NECAP1-207ENST00000544891 CARMIL2Q6F5E8 1435 aa11.85□□□□□ -0.51
NECAP1-207ENST00000544891 BECN1Q14457 450 aa11.83□□□□□ -0.51
NECAP1-207ENST00000544891 NUP160Q12769 1436 aa11.83□□□□□ -0.52
NECAP1-207ENST00000544891 AMER1Q5JTC6 1135 aaPredicted RBP11.83□□□□□ -0.52
NECAP1-207ENST00000544891 TCOF1Q13428 1488 aaKnown RBP11.83□□□□□ -0.52
NECAP1-207ENST00000544891 PRKCSHP14314 528 aaPredicted RBP11.83□□□□□ -0.52
NECAP1-207ENST00000544891 KNSTRNQ9Y448 316 aa11.82□□□□□ -0.52
NECAP1-207ENST00000544891 ADCY10Q96PN6 1610 aa11.82□□□□□ -0.52
NECAP1-207ENST00000544891 SETD5Q9C0A6 1442 aa11.82□□□□□ -0.52
NECAP1-207ENST00000544891 ITSN2Q9NZM3 1697 aa11.82□□□□□ -0.52
NECAP1-207ENST00000544891 MYOM3Q5VTT5 1437 aa11.82□□□□□ -0.52
NECAP1-207ENST00000544891 EPRSP07814 1512 aaKnown RBP11.82□□□□□ -0.52
NECAP1-207ENST00000544891 FGD6Q6ZV73 1430 aa11.81□□□□□ -0.52
NECAP1-207ENST00000544891 NCOA2Q15596 1464 aa11.81□□□□□ -0.52
NECAP1-207ENST00000544891 PTPN23Q9H3S7 1636 aa11.81□□□□□ -0.52
NECAP1-207ENST00000544891 MS4A1P11836 297 aa11.81□□□□□ -0.52
NECAP1-207ENST00000544891 DISP1Q96F81 1524 aa11.8□□□□□ -0.52
NECAP1-207ENST00000544891 NUDCQ9Y266 331 aa11.8□□□□□ -0.52
NECAP1-207ENST00000544891 MIA2Q96PC5 1412 aa11.8□□□□□ -0.52
NECAP1-207ENST00000544891 KCNH8Q96L42 1107 aa11.8□□□□□ -0.52
NECAP1-207ENST00000544891 PHLDB1Q86UU1 1377 aa11.8□□□□□ -0.52
NECAP1-207ENST00000544891 PNNQ9H307 717 aaKnown RBP11.79□□□□□ -0.52
NECAP1-207ENST00000544891 SALL2Q9Y467 1007 aaPredicted RBP11.79□□□□□ -0.52
NECAP1-207ENST00000544891 GCC2Q8IWJ2 1684 aa11.78□□□□□ -0.52
NECAP1-207ENST00000544891 HDGFP51858 240 aaKnown RBP11.78□□□□□ -0.52
NECAP1-207ENST00000544891 MIER1Q8N108 512 aa11.77□□□□□ -0.52
NECAP1-207ENST00000544891 CARD11Q9BXL7 1154 aa11.77□□□□□ -0.52
NECAP1-207ENST00000544891 DHX57Q6P158 1386 aaKnown RBP11.77□□□□□ -0.53
NECAP1-207ENST00000544891 GOLGA6L22H0YM25 854 aa11.77□□□□□ -0.53
NECAP1-207ENST00000544891 GLIPR1L2Q4G1C9 344 aa11.76□□□□□ -0.53
NECAP1-207ENST00000544891 KANK1Q14678 1352 aa11.76□□□□□ -0.53
NECAP1-207ENST00000544891 AKNAQ7Z591 1439 aa11.76□□□□□ -0.53
NECAP1-207ENST00000544891 NCLP19338 710 aaKnown RBP11.75□□□□□ -0.53
NECAP1-207ENST00000544891 HAP1P54257 671 aaPredicted RBP11.74□□□□□ -0.53
NECAP1-207ENST00000544891 SHROOM2Q13796 1616 aa11.74□□□□□ -0.53
NECAP1-207ENST00000544891 CASC1Q6TDU7 716 aa11.73□□□□□ -0.53
NECAP1-207ENST00000544891 CHD1O14646 1710 aa11.73□□□□□ -0.53
NECAP1-207ENST00000544891 MAPK8IP3Q9UPT6 1336 aa11.73□□□□□ -0.53
NECAP1-207ENST00000544891 RGL3Q3MIN7 710 aa11.72□□□□□ -0.53
NECAP1-207ENST00000544891 ADGBQ8N7X0 1667 aa11.72□□□□□ -0.53
NECAP1-207ENST00000544891 ABCA8O94911 1581 aa11.72□□□□□ -0.53
NECAP1-207ENST00000544891 RAB3GAP2Q9H2M9 1393 aa11.71□□□□□ -0.53
NECAP1-207ENST00000544891 PLPPR3Q6T4P5 718 aa11.71□□□□□ -0.53
NECAP1-207ENST00000544891 C14orf37Q86TY3 774 aa11.71□□□□□ -0.53
NECAP1-207ENST00000544891 KIF14Q15058 1648 aa11.71□□□□□ -0.53
NECAP1-207ENST00000544891 HFM1A2PYH4 1435 aa11.71□□□□□ -0.54
NECAP1-207ENST00000544891 CFAP44Q96MT7 982 aa11.7□□□□□ -0.54
NECAP1-207ENST00000544891 NUP153P49790 1475 aaKnown RBP11.7□□□□□ -0.54
NECAP1-207ENST00000544891 DNMT1P26358 1616 aaKnown RBP11.7□□□□□ -0.54
NECAP1-207ENST00000544891 MAGI3Q5TCQ9 1506 aa11.7□□□□□ -0.54
NECAP1-207ENST00000544891 TMF1P82094 1093 aa11.7□□□□□ -0.54
NECAP1-207ENST00000544891 PPM1GO15355 546 aaPredicted RBP11.69□□□□□ -0.54
NECAP1-207ENST00000544891 CDK11BP21127 795 aaKnown RBP11.69□□□□□ -0.54
NECAP1-207ENST00000544891 POGKQ9P215 609 aa11.69□□□□□ -0.54
NECAP1-207ENST00000544891 CDK13Q14004 1512 aaKnown RBP11.68□□□□□ -0.54
NECAP1-207ENST00000544891 CROCC2H7BZ55 1655 aa11.68□□□□□ -0.54
NECAP1-207ENST00000544891 HOMEZQ8IX15 550 aa11.68□□□□□ -0.54
NECAP1-207ENST00000544891 FTSJ3Q8IY81 847 aaKnown RBP11.68□□□□□ -0.54
NECAP1-207ENST00000544891 CCER2I3L3R5 266 aa11.67□□□□□ -0.54
NECAP1-207ENST00000544891 ARID4BQ4LE39 1312 aaPredicted RBP11.67□□□□□ -0.54
NECAP1-207ENST00000544891 PPP4R2Q9NY27 417 aa11.67□□□□□ -0.54
NECAP1-207ENST00000544891 TROQ12816 1431 aaPredicted RBP11.67□□□□□ -0.54
NECAP1-207ENST00000544891 SCAF1Q9H7N4 1312 aaKnown RBP11.67□□□□□ -0.54
NECAP1-207ENST00000544891 ROCK1Q13464 1354 aa11.67□□□□□ -0.54
NECAP1-207ENST00000544891 CHMP4AQ9BY43 222 aa11.66□□□□□ -0.54
NECAP1-207ENST00000544891 MAPKBP1O60336 1514 aa11.65□□□□□ -0.54
NECAP1-207ENST00000544891 UACAQ9BZF9 1416 aa11.65□□□□□ -0.55
NECAP1-207ENST00000544891 ERICH6BQ5W0A0 696 aa11.65□□□□□ -0.55
NECAP1-207ENST00000544891 RSPH4AQ5TD94 716 aa11.64□□□□□ -0.55
NECAP1-207ENST00000544891 HIRIP3Q9BW71 556 aaPredicted RBP11.62□□□□□ -0.55
NECAP1-207ENST00000544891 ZRSR1Q15695 479 aaKnown RBP11.62□□□□□ -0.55
NECAP1-207ENST00000544891 TRIM44Q96DX7 344 aaPredicted RBP11.62□□□□□ -0.55
NECAP1-207ENST00000544891 SHANK2Q9UPX8 1470 aa11.62□□□□□ -0.55
NECAP1-207ENST00000544891 JPH4Q96JJ6 628 aa11.61□□□□□ -0.55
NECAP1-207ENST00000544891 CLASP1Q7Z460 1538 aa11.61□□□□□ -0.55
NECAP1-207ENST00000544891 DAPK1P53355 1430 aa11.61□□□□□ -0.55
NECAP1-207ENST00000544891 PRG4Q92954 1404 aaPredicted RBP11.6□□□□□ -0.55
NECAP1-207ENST00000544891 EFCAB2Q5VUJ9 269 aa11.6□□□□□ -0.55
NECAP1-207ENST00000544891 ARHGEF5Q12774 1597 aa11.59□□□□□ -0.55
NECAP1-207ENST00000544891 CAMSAP2Q08AD1 1489 aa11.59□□□□□ -0.55
NECAP1-207ENST00000544891 UHRF1BP1LA0JNW5 1464 aa11.58□□□□□ -0.56
NECAP1-207ENST00000544891 ADGRL2O95490 1459 aa11.58□□□□□ -0.56
NECAP1-207ENST00000544891 CALD1Q05682 793 aaKnown RBP11.58□□□□□ -0.56
NECAP1-207ENST00000544891 ANKRD30AQ9BXX3 1397 aa11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms