RNA–Protein interactions for RNA: ENST00000543928.5

SP140-213, Transcript of SP140 nuclear body protein, humanhuman

TSL 2

Gene SP140, Length 640 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SP140-213ENST00000543928 FANCAO15360 1455 aa21.21■□□□□ 0.99
SP140-213ENST00000543928 ARHGAP5Q13017 1502 aa21.21■□□□□ 0.99
SP140-213ENST00000543928 NEO1Q92859 1461 aa21.2■□□□□ 0.98
SP140-213ENST00000543928 CDC42BPBQ9Y5S2 1711 aa21.2■□□□□ 0.98
SP140-213ENST00000543928 EFCAB2Q5VUJ9 269 aa21.19■□□□□ 0.98
SP140-213ENST00000543928 PPARGC1BQ86YN6 1023 aaKnown RBP21.18■□□□□ 0.98
SP140-213ENST00000543928 CFAP74Q9C0B2 1584 aa21.18■□□□□ 0.98
SP140-213ENST00000543928 PHLDB1Q86UU1 1377 aa21.17■□□□□ 0.98
SP140-213ENST00000543928 AKNAQ7Z591 1439 aa21.16■□□□□ 0.98
SP140-213ENST00000543928 CFDP1Q9UEE9 299 aaPredicted RBP21.16■□□□□ 0.98
SP140-213ENST00000543928 ITSN2Q9NZM3 1697 aa21.15■□□□□ 0.98
SP140-213ENST00000543928 KDM6BO15054 1643 aa21.14■□□□□ 0.97
SP140-213ENST00000543928 ZNF777Q9ULD5 760 aaPredicted RBP21.13■□□□□ 0.97
SP140-213ENST00000543928 COL17A1Q9UMD9 1497 aaPredicted RBP21.13■□□□□ 0.97
SP140-213ENST00000543928 ADGRL1O94910 1474 aa21.12■□□□□ 0.97
SP140-213ENST00000543928 MYOM3Q5VTT5 1437 aa21.12■□□□□ 0.97
SP140-213ENST00000543928 SCAPERQ9BY12 1400 aa21.09■□□□□ 0.97
SP140-213ENST00000543928 SAMD9LQ8IVG5 1584 aa21.09■□□□□ 0.97
SP140-213ENST00000543928 DENND4BO75064 1496 aaPredicted RBP21.07■□□□□ 0.96
SP140-213ENST00000543928 ZNF644Q9H582 1327 aaPredicted RBP21.06■□□□□ 0.96
SP140-213ENST00000543928 ABCC1P33527 1531 aa21.06■□□□□ 0.96
SP140-213ENST00000543928 MIA2Q96PC5 1412 aa21.05■□□□□ 0.96
SP140-213ENST00000543928 RAPGEF3O95398 923 aa21.05■□□□□ 0.96
SP140-213ENST00000543928 ARHGEF12Q9NZN5 1544 aa21.04■□□□□ 0.96
SP140-213ENST00000543928 CAMSAP2Q08AD1 1489 aa21.03■□□□□ 0.96
SP140-213ENST00000543928 PLEKHH2Q8IVE3 1493 aa21.03■□□□□ 0.96
SP140-213ENST00000543928 SYCP2Q9BX26 1530 aa21.02■□□□□ 0.96
SP140-213ENST00000543928 FGD6Q6ZV73 1430 aa21.02■□□□□ 0.96
SP140-213ENST00000543928 POGZQ7Z3K3 1410 aa21.02■□□□□ 0.96
SP140-213ENST00000543928 KIAA1107Q9UPP5 1409 aa21.02■□□□□ 0.96
SP140-213ENST00000543928 HNRNPMP52272 730 aaKnown RBP eCLIP21.01■□□□□ 0.95
SP140-213ENST00000543928 FRMPD1Q5SYB0 1578 aa21.01■□□□□ 0.95
SP140-213ENST00000543928 RICTORQ6R327 1708 aa21.01■□□□□ 0.95
SP140-213ENST00000543928 TRAPPC8Q9Y2L5 1435 aa20.99■□□□□ 0.95
SP140-213ENST00000543928 PTPN23Q9H3S7 1636 aa20.98■□□□□ 0.95
SP140-213ENST00000543928 AFAP1Q8N556 730 aa20.98■□□□□ 0.95
SP140-213ENST00000543928 ZNF518AQ6AHZ1 1483 aa20.98■□□□□ 0.95
SP140-213ENST00000543928 MBD5Q9P267 1494 aa20.96■□□□□ 0.95
SP140-213ENST00000543928 TCOF1Q13428 1488 aaKnown RBP20.94■□□□□ 0.94
SP140-213ENST00000543928 ZMYM4Q5VZL5 1548 aa20.94■□□□□ 0.94
SP140-213ENST00000543928 KDM5CP41229 1560 aa20.93■□□□□ 0.94
SP140-213ENST00000543928 FAM50AQ14320 339 aaKnown RBP20.92■□□□□ 0.94
SP140-213ENST00000543928 ARHGEF5Q12774 1597 aa20.91■□□□□ 0.94
SP140-213ENST00000543928 CCDC141Q6ZP82 1450 aa20.91■□□□□ 0.94
SP140-213ENST00000543928 RSPH4AQ5TD94 716 aa20.9■□□□□ 0.94
SP140-213ENST00000543928 MYT1LQ9UL68 1186 aa20.89■□□□□ 0.93
SP140-213ENST00000543928 HECW2Q9P2P5 1572 aa20.89■□□□□ 0.93
SP140-213ENST00000543928 MAGI2Q86UL8 1455 aa20.88■□□□□ 0.93
SP140-213ENST00000543928 SPAG9O60271 1321 aaKnown RBP20.88■□□□□ 0.93
SP140-213ENST00000543928 MLH3Q9UHC1 1453 aa20.88■□□□□ 0.93
SP140-213ENST00000543928 YEATS2Q9ULM3 1422 aa20.87■□□□□ 0.93
SP140-213ENST00000543928 ZFYVE16Q7Z3T8 1539 aa20.87■□□□□ 0.93
SP140-213ENST00000543928 RRBP1Q9P2E9 1410 aaKnown RBP20.87■□□□□ 0.93
SP140-213ENST00000543928 ARHGEF40Q8TER5 1519 aa20.84■□□□□ 0.93
SP140-213ENST00000543928 TSPY4P0CV99 314 aa20.84■□□□□ 0.93
SP140-213ENST00000543928 TSPY10P0CW01 314 aa20.84■□□□□ 0.93
SP140-213ENST00000543928 DNMT1P26358 1616 aaKnown RBP20.84■□□□□ 0.93
SP140-213ENST00000543928 ABCC5O15440 1437 aa20.84■□□□□ 0.93
SP140-213ENST00000543928 KIDINS220Q9ULH0 1771 aa20.84■□□□□ 0.93
SP140-213ENST00000543928 ATP7AQ04656 1500 aa20.83■□□□□ 0.93
SP140-213ENST00000543928 DAPK1P53355 1430 aa20.83■□□□□ 0.93
SP140-213ENST00000543928 INO80Q9ULG1 1556 aaPredicted RBP20.83■□□□□ 0.92
SP140-213ENST00000543928 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP20.83■□□□□ 0.92
SP140-213ENST00000543928 RTEL1-TNFRSF6BF6WH68 1400 aa20.81■□□□□ 0.92
SP140-213ENST00000543928 CROCC2H7BZ55 1655 aa20.8■□□□□ 0.92
SP140-213ENST00000543928 C9orf84Q5VXU9 1444 aa20.8■□□□□ 0.92
SP140-213ENST00000543928 ABCA6Q8N139 1617 aa20.8■□□□□ 0.92
SP140-213ENST00000543928 DIP2CQ9Y2E4 1556 aa20.8■□□□□ 0.92
SP140-213ENST00000543928 ATP10AO60312 1499 aa20.79■□□□□ 0.92
SP140-213ENST00000543928 SHANK2Q9UPX8 1470 aa20.79■□□□□ 0.92
SP140-213ENST00000543928 MAST1Q9Y2H9 1570 aa20.79■□□□□ 0.92
SP140-213ENST00000543928 ITGAEP38570 1179 aa20.76■□□□□ 0.91
SP140-213ENST00000543928 CHIC2Q9UKJ5 165 aa20.75■□□□□ 0.91
SP140-213ENST00000543928 PTPRKQ15262 1439 aa20.74■□□□□ 0.91
SP140-213ENST00000543928 ADGBQ8N7X0 1667 aa20.71■□□□□ 0.91
SP140-213ENST00000543928 A2MP01023 1474 aa20.71■□□□□ 0.91
SP140-213ENST00000543928 ARID4BQ4LE39 1312 aaPredicted RBP20.71■□□□□ 0.91
SP140-213ENST00000543928 PLXNC1O60486 1568 aa20.71■□□□□ 0.91
SP140-213ENST00000543928 REREQ9P2R6 1566 aa20.71■□□□□ 0.91
SP140-213ENST00000543928 ANKRD30AQ9BXX3 1397 aa20.7■□□□□ 0.9
SP140-213ENST00000543928 SIGLEC1Q9BZZ2 1709 aa20.7■□□□□ 0.9
SP140-213ENST00000543928 ADGRL2O95490 1459 aa20.69■□□□□ 0.9
SP140-213ENST00000543928 RRP7BPQ9NSQ0 103 aa20.68■□□□□ 0.9
SP140-213ENST00000543928 KIF15Q9NS87 1388 aa20.68■□□□□ 0.9
SP140-213ENST00000543928 NCOA1Q15788 1441 aa20.68■□□□□ 0.9
SP140-213ENST00000543928 DHX29Q7Z478 1369 aaKnown RBP20.67■□□□□ 0.9
SP140-213ENST00000543928 AGLP35573 1532 aa20.65■□□□□ 0.9
SP140-213ENST00000543928 PLPPR3Q6T4P5 718 aa20.65■□□□□ 0.9
SP140-213ENST00000543928 DUOX2Q9NRD8 1548 aa20.64■□□□□ 0.9
SP140-213ENST00000543928 ROCK1Q13464 1354 aa20.64■□□□□ 0.89
SP140-213ENST00000543928 MLECQ14165 292 aa20.62■□□□□ 0.89
SP140-213ENST00000543928 BCORL1Q5H9F3 1711 aa20.6■□□□□ 0.89
SP140-213ENST00000543928 KIF3BO15066 747 aa20.59■□□□□ 0.89
SP140-213ENST00000543928 ERBINQ96RT1 1412 aa20.58■□□□□ 0.88
SP140-213ENST00000543928 ANKRD50Q9ULJ7 1429 aa20.56■□□□□ 0.88
SP140-213ENST00000543928 EIF2AK4Q9P2K8 1649 aaKnown RBP20.56■□□□□ 0.88
SP140-213ENST00000543928 KDM4FA0A1W2PPD8 638 aa20.55■□□□□ 0.88
SP140-213ENST00000543928 GGT6Q6P531 493 aa20.55■□□□□ 0.88
SP140-213ENST00000543928 ADAMTSL3P82987 1691 aa20.54■□□□□ 0.88
SP140-213ENST00000543928 HFM1A2PYH4 1435 aa20.52■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms