RNA–Protein interactions for RNA: ENST00000543470.5

RPS6KC1-207, Transcript of ribosomal protein S6 kinase C1, humanhuman

TSL 2 BASIC

Gene RPS6KC1, Length 4,227 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS6KC1-207ENST00000543470 CFDP1Q9UEE9 299 aaPredicted RBP19.07■□□□□ 0.64
RPS6KC1-207ENST00000543470 MYOM3Q5VTT5 1437 aa19.07■□□□□ 0.64
RPS6KC1-207ENST00000543470 ANP32BQ92688 251 aaKnown RBP19.06■□□□□ 0.64
RPS6KC1-207ENST00000543470 NCOA2Q15596 1464 aa19.06■□□□□ 0.64
RPS6KC1-207ENST00000543470 CNTLNQ9NXG0 1405 aa19.06■□□□□ 0.64
RPS6KC1-207ENST00000543470 HFM1A2PYH4 1435 aa19.05■□□□□ 0.64
RPS6KC1-207ENST00000543470 NAIPQ13075 1403 aa19.05■□□□□ 0.64
RPS6KC1-207ENST00000543470 PTPRKQ15262 1439 aa19.05■□□□□ 0.64
RPS6KC1-207ENST00000543470 FYCO1Q9BQS8 1478 aa19.04■□□□□ 0.64
RPS6KC1-207ENST00000543470 PLPPR3Q6T4P5 718 aa19.04■□□□□ 0.64
RPS6KC1-207ENST00000543470 PKD2Q13563 968 aa19.03■□□□□ 0.64
RPS6KC1-207ENST00000543470 ZNF644Q9H582 1327 aaPredicted RBP19.03■□□□□ 0.64
RPS6KC1-207ENST00000543470 MAP3K1Q13233 1512 aa19.02■□□□□ 0.63
RPS6KC1-207ENST00000543470 IPO9Q96P70 1041 aaKnown RBP19.01■□□□□ 0.63
RPS6KC1-207ENST00000543470 AKNAQ7Z591 1439 aa19.01■□□□□ 0.63
RPS6KC1-207ENST00000543470 CHMP7Q8WUX9 453 aaPredicted RBP19■□□□□ 0.63
RPS6KC1-207ENST00000543470 AQRO60306 1485 aaKnown RBP eCLIP18.99■□□□□ 0.632e-14■■■□□ 18.8
RPS6KC1-207ENST00000543470 DCAF11Q8TEB1 546 aa18.98■□□□□ 0.63
RPS6KC1-207ENST00000543470 HMGXB3Q12766 1538 aa18.98■□□□□ 0.63
RPS6KC1-207ENST00000543470 CC2D1BQ5T0F9 858 aaKnown RBP18.97■□□□□ 0.63
RPS6KC1-207ENST00000543470 EXOC6Q8TAG9 804 aa18.95■□□□□ 0.62
RPS6KC1-207ENST00000543470 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP18.94■□□□□ 0.62
RPS6KC1-207ENST00000543470 ESF1Q9H501 851 aaKnown RBP18.94■□□□□ 0.62
RPS6KC1-207ENST00000543470 NEUROD2Q15784 382 aa18.94■□□□□ 0.62
RPS6KC1-207ENST00000543470 RCAN3Q9UKA8 241 aa18.93■□□□□ 0.62
RPS6KC1-207ENST00000543470 RGS3P49796 1198 aa18.91■□□□□ 0.62
RPS6KC1-207ENST00000543470 ST20-MTHFSA0A0A6YYL1 179 aa18.9■□□□□ 0.62
RPS6KC1-207ENST00000543470 PLEKHD1A6NEE1 506 aa18.9■□□□□ 0.62
RPS6KC1-207ENST00000543470 PLIN1O60240 522 aa18.9■□□□□ 0.62
RPS6KC1-207ENST00000543470 USP47Q96K76 1375 aa18.9■□□□□ 0.62
RPS6KC1-207ENST00000543470 NESP48681 1621 aa18.89■□□□□ 0.61
RPS6KC1-207ENST00000543470 NPM1P06748 294 aaKnown RBP eCLIP18.89■□□□□ 0.61
RPS6KC1-207ENST00000543470 POLA1P09884 1462 aaPredicted RBP18.88■□□□□ 0.61
RPS6KC1-207ENST00000543470 PTPN23Q9H3S7 1636 aa18.87■□□□□ 0.61
RPS6KC1-207ENST00000543470 KNSTRNQ9Y448 316 aa18.85■□□□□ 0.61
RPS6KC1-207ENST00000543470 EFCAB5A4FU69 1503 aa18.85■□□□□ 0.61
RPS6KC1-207ENST00000543470 PDE4AP27815 886 aa18.83■□□□□ 0.61
RPS6KC1-207ENST00000543470 RRP1P56182 461 aaKnown RBP18.83■□□□□ 0.61
RPS6KC1-207ENST00000543470 NUP155O75694 1391 aa18.83■□□□□ 0.6
RPS6KC1-207ENST00000543470 GAPVD1Q14C86 1478 aa18.83■□□□□ 0.6
RPS6KC1-207ENST00000543470 DDRGK1Q96HY6 314 aa18.82■□□□□ 0.6
RPS6KC1-207ENST00000543470 SLC4A3P48751 1232 aa18.82■□□□□ 0.6
RPS6KC1-207ENST00000543470 TCERG1O14776 1098 aaKnown RBP18.81■□□□□ 0.6
RPS6KC1-207ENST00000543470 TOPBP1Q92547 1522 aa18.81■□□□□ 0.6
RPS6KC1-207ENST00000543470 PLEKHG5O94827 1062 aa18.8■□□□□ 0.6
RPS6KC1-207ENST00000543470 TNNT2P45379 298 aaPredicted RBP18.8■□□□□ 0.6
RPS6KC1-207ENST00000543470 BECN1Q14457 450 aa18.8■□□□□ 0.6
RPS6KC1-207ENST00000543470 PPM1GO15355 546 aaPredicted RBP18.79■□□□□ 0.6
RPS6KC1-207ENST00000543470 PNISRQ8TF01 805 aaKnown RBP18.79■□□□□ 0.6
RPS6KC1-207ENST00000543470 NCOA1Q15788 1441 aa18.79■□□□□ 0.6
RPS6KC1-207ENST00000543470 FRAT1Q92837 279 aaPredicted RBP18.79■□□□□ 0.6
RPS6KC1-207ENST00000543470 CDCA7LQ96GN5 454 aa18.78■□□□□ 0.6
RPS6KC1-207ENST00000543470 SKAP1Q86WV1 359 aa18.78■□□□□ 0.6
RPS6KC1-207ENST00000543470 RALBP1Q15311 655 aa18.77■□□□□ 0.59
RPS6KC1-207ENST00000543470 ZBTB4Q9P1Z0 1013 aaPredicted RBP18.77■□□□□ 0.59
RPS6KC1-207ENST00000543470 MYBBP1AQ9BQG0 1328 aaKnown RBP18.76■□□□□ 0.59
RPS6KC1-207ENST00000543470 ROCK2O75116 1388 aaKnown RBP18.75■□□□□ 0.59
RPS6KC1-207ENST00000543470 GLIPR1L2Q4G1C9 344 aa18.75■□□□□ 0.59
RPS6KC1-207ENST00000543470 CFAP43Q8NDM7 1665 aa18.75■□□□□ 0.59
RPS6KC1-207ENST00000543470 SMG6Q86US8 1419 aaKnown RBP18.75■□□□□ 0.59
RPS6KC1-207ENST00000543470 MYH16Q9H6N6 1097 aa18.75■□□□□ 0.59
RPS6KC1-207ENST00000543470 NLRP13Q86W25 1043 aa18.74■□□□□ 0.59
RPS6KC1-207ENST00000543470 KTN1Q86UP2 1357 aaKnown RBP18.74■□□□□ 0.59
RPS6KC1-207ENST00000543470 ANKRD30BQ9BXX2 1392 aa18.74■□□□□ 0.59
RPS6KC1-207ENST00000543470 KIF15Q9NS87 1388 aa18.74■□□□□ 0.59
RPS6KC1-207ENST00000543470 ABCA10Q8WWZ4 1543 aa18.74■□□□□ 0.59
RPS6KC1-207ENST00000543470 CDK13Q14004 1512 aaKnown RBP18.74■□□□□ 0.59
RPS6KC1-207ENST00000543470 EHBP1L1Q8N3D4 1523 aa18.74■□□□□ 0.59
RPS6KC1-207ENST00000543470 IL27Q8NEV9 243 aa18.74■□□□□ 0.59
RPS6KC1-207ENST00000543470 SUPT6HQ7KZ85 1726 aaKnown RBP18.73■□□□□ 0.59
RPS6KC1-207ENST00000543470 CRBNQ96SW2 442 aa18.73■□□□□ 0.59
RPS6KC1-207ENST00000543470 HNRNPMP52272 730 aaKnown RBP eCLIP18.72■□□□□ 0.591e-6■■■■□ 22.7
RPS6KC1-207ENST00000543470 ANKRD30AQ9BXX3 1397 aa18.7■□□□□ 0.58
RPS6KC1-207ENST00000543470 TRIM44Q96DX7 344 aaPredicted RBP18.7■□□□□ 0.58
RPS6KC1-207ENST00000543470 PDS5BQ9NTI5 1447 aa18.7■□□□□ 0.58
RPS6KC1-207ENST00000543470 FTSJ3Q8IY81 847 aaKnown RBP18.69■□□□□ 0.58
RPS6KC1-207ENST00000543470 NCLP19338 710 aaKnown RBP18.69■□□□□ 0.58
RPS6KC1-207ENST00000543470 ANO8Q9HCE9 1232 aaPredicted RBP18.68■□□□□ 0.58
RPS6KC1-207ENST00000543470 SNAPC4Q5SXM2 1469 aa18.67■□□□□ 0.58
RPS6KC1-207ENST00000543470 TPRNQ4KMQ1 711 aa18.67■□□□□ 0.58
RPS6KC1-207ENST00000543470 DNMBPQ6XZF7 1577 aa18.67■□□□□ 0.58
RPS6KC1-207ENST00000543470 CDCA8Q53HL2 280 aa18.67■□□□□ 0.58
RPS6KC1-207ENST00000543470 CFAP53Q96M91 514 aa18.67■□□□□ 0.58
RPS6KC1-207ENST00000543470 PANK3Q9H999 370 aa18.66■□□□□ 0.58
RPS6KC1-207ENST00000543470 DNAJC5BQ9UF47 199 aa18.65■□□□□ 0.58
RPS6KC1-207ENST00000543470 DAPK1P53355 1430 aa18.65■□□□□ 0.58
RPS6KC1-207ENST00000543470 EPRSP07814 1512 aaKnown RBP18.64■□□□□ 0.57
RPS6KC1-207ENST00000543470 RPRD2Q5VT52 1461 aaKnown RBP18.63■□□□□ 0.57
RPS6KC1-207ENST00000543470 TMF1P82094 1093 aa18.63■□□□□ 0.57
RPS6KC1-207ENST00000543470 PDE3BQ13370 1112 aa18.63■□□□□ 0.57
RPS6KC1-207ENST00000543470 MIA2Q96PC5 1412 aa18.63■□□□□ 0.57
RPS6KC1-207ENST00000543470 GRIN2BQ13224 1484 aa18.63■□□□□ 0.57
RPS6KC1-207ENST00000543470 ZBTB7CA1YPR0 619 aa18.62■□□□□ 0.57
RPS6KC1-207ENST00000543470 CCDC146Q8IYE0 955 aa18.61■□□□□ 0.57
RPS6KC1-207ENST00000543470 NBPF1Q3BBV0 1214 aa18.61■□□□□ 0.57
RPS6KC1-207ENST00000543470 BACH2Q9BYV9 841 aa18.6■□□□□ 0.57
RPS6KC1-207ENST00000543470 C14orf37Q86TY3 774 aa18.6■□□□□ 0.57
RPS6KC1-207ENST00000543470 ABCC5O15440 1437 aa18.6■□□□□ 0.57
RPS6KC1-207ENST00000543470 GOLGA6L22H0YM25 854 aa18.6■□□□□ 0.57
RPS6KC1-207ENST00000543470 U2SURPO15042 1029 aaKnown RBP18.6■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 8.9 ms