RNA–Protein interactions for RNA: ENST00000543470.5

RPS6KC1-207, Transcript of ribosomal protein S6 kinase C1, humanhuman

TSL 2 BASIC

Gene RPS6KC1, Length 4,227 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS6KC1-207ENST00000543470 SYNJ1O43426 1573 aa19.94■□□□□ 0.78
RPS6KC1-207ENST00000543470 KIF27Q86VH2 1401 aa19.9■□□□□ 0.78
RPS6KC1-207ENST00000543470 FBLN2P98095 1184 aa19.89■□□□□ 0.77
RPS6KC1-207ENST00000543470 RBM19Q9Y4C8 960 aaKnown RBP19.87■□□□□ 0.77
RPS6KC1-207ENST00000543470 BCL11AQ9H165 835 aa19.83■□□□□ 0.77
RPS6KC1-207ENST00000543470 CHIC2Q9UKJ5 165 aa19.83■□□□□ 0.76
RPS6KC1-207ENST00000543470 FAM9BQ8IZU0 186 aa19.83■□□□□ 0.76
RPS6KC1-207ENST00000543470 ATAD2BQ9ULI0 1458 aa19.81■□□□□ 0.76
RPS6KC1-207ENST00000543470 SETD5Q9C0A6 1442 aa19.8■□□□□ 0.76
RPS6KC1-207ENST00000543470 NPM2Q86SE8 214 aaKnown RBP19.8■□□□□ 0.76
RPS6KC1-207ENST00000543470 ZNF777Q9ULD5 760 aaPredicted RBP19.77■□□□□ 0.76
RPS6KC1-207ENST00000543470 ARAP1Q96P48 1450 aa19.77■□□□□ 0.75
RPS6KC1-207ENST00000543470 SENP3-EIF4A1A0A087X0R7 540 aa19.75■□□□□ 0.75
RPS6KC1-207ENST00000543470 SALL2Q9Y467 1007 aaPredicted RBP19.73■□□□□ 0.75
RPS6KC1-207ENST00000543470 RRP7BPQ9NSQ0 103 aa19.73■□□□□ 0.75
RPS6KC1-207ENST00000543470 PPP1R15AO75807 674 aaPredicted RBP19.72■□□□□ 0.75
RPS6KC1-207ENST00000543470 CUX2O14529 1486 aa19.71■□□□□ 0.75
RPS6KC1-207ENST00000543470 ANP32AP39687 249 aaKnown RBP19.7■□□□□ 0.74
RPS6KC1-207ENST00000543470 MTUS2Q5JR59 1369 aa19.67■□□□□ 0.74
RPS6KC1-207ENST00000543470 CARMIL1Q5VZK9 1371 aa19.67■□□□□ 0.74
RPS6KC1-207ENST00000543470 CCER2I3L3R5 266 aa19.67■□□□□ 0.74
RPS6KC1-207ENST00000543470 MRS2Q9HD23 443 aa19.65■□□□□ 0.74
RPS6KC1-207ENST00000543470 CANXP27824 592 aaKnown RBP19.65■□□□□ 0.74
RPS6KC1-207ENST00000543470 RRBP1Q9P2E9 1410 aaKnown RBP19.64■□□□□ 0.74
RPS6KC1-207ENST00000543470 NBR1Q14596 966 aa19.61■□□□□ 0.73
RPS6KC1-207ENST00000543470 B4GALNT3Q6L9W6 998 aa19.6■□□□□ 0.73
RPS6KC1-207ENST00000543470 PRXQ9BXM0 1461 aa19.6■□□□□ 0.73
RPS6KC1-207ENST00000543470 PHLDB1Q86UU1 1377 aa19.59■□□□□ 0.73
RPS6KC1-207ENST00000543470 EIF4G2P78344 907 aaKnown RBP eCLIP19.58■□□□□ 0.73
RPS6KC1-207ENST00000543470 ARHGAP35Q9NRY4 1499 aa19.58■□□□□ 0.72
RPS6KC1-207ENST00000543470 TIMELESSQ9UNS1 1208 aa19.57■□□□□ 0.72
RPS6KC1-207ENST00000543470 HSPA5P11021 654 aaKnown RBP19.53■□□□□ 0.72
RPS6KC1-207ENST00000543470 FHAD1B1AJZ9 1412 aa19.53■□□□□ 0.72
RPS6KC1-207ENST00000543470 FHOD3Q2V2M9 1422 aa19.53■□□□□ 0.72
RPS6KC1-207ENST00000543470 WDR97A6NE52 1622 aa19.53■□□□□ 0.72
RPS6KC1-207ENST00000543470 FOXD1Q16676 465 aa19.52■□□□□ 0.72
RPS6KC1-207ENST00000543470 CCDC136Q96JN2 1154 aa19.52■□□□□ 0.72
RPS6KC1-207ENST00000543470 ZBTB47Q9UFB7 747 aaPredicted RBP19.52■□□□□ 0.71
RPS6KC1-207ENST00000543470 TOP2BQ02880 1626 aa19.5■□□□□ 0.71
RPS6KC1-207ENST00000543470 IGF1RP08069 1367 aa19.5■□□□□ 0.71
RPS6KC1-207ENST00000543470 TMC1Q8TDI8 760 aa19.49■□□□□ 0.71
RPS6KC1-207ENST00000543470 ERICH3Q5RHP9 1530 aa19.49■□□□□ 0.71
RPS6KC1-207ENST00000543470 EIF5BO60841 1220 aaKnown RBP19.48■□□□□ 0.71
RPS6KC1-207ENST00000543470 PPP4R2Q9NY27 417 aa19.48■□□□□ 0.71
RPS6KC1-207ENST00000543470 SLC24A1O60721 1099 aa19.47■□□□□ 0.71
RPS6KC1-207ENST00000543470 UNC13AQ9UPW8 1703 aa19.45■□□□□ 0.7
RPS6KC1-207ENST00000543470 BICRAQ9NZM4 1560 aa19.44■□□□□ 0.7
RPS6KC1-207ENST00000543470 KDM2AQ9Y2K7 1162 aa19.43■□□□□ 0.7
RPS6KC1-207ENST00000543470 LRRC9Q6ZRR7 1453 aa19.43■□□□□ 0.7
RPS6KC1-207ENST00000543470 CUX1P39880 1505 aa19.42■□□□□ 0.7
RPS6KC1-207ENST00000543470 CHGAP10645 457 aaKnown RBP19.37■□□□□ 0.69
RPS6KC1-207ENST00000543470 MSH5O43196 834 aa19.36■□□□□ 0.69
RPS6KC1-207ENST00000543470 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.36■□□□□ 0.694e-7■□□□□ 10.7
RPS6KC1-207ENST00000543470 MAPKBP1O60336 1514 aa19.36■□□□□ 0.69
RPS6KC1-207ENST00000543470 NEFMP07197 916 aa19.36■□□□□ 0.69
RPS6KC1-207ENST00000543470 L3MBTL2Q969R5 705 aa19.34■□□□□ 0.69
RPS6KC1-207ENST00000543470 CCDC184Q52MB2 194 aa19.33■□□□□ 0.69
RPS6KC1-207ENST00000543470 CCDC18Q5T9S5 1454 aa19.32■□□□□ 0.68
RPS6KC1-207ENST00000543470 DEKP35659 375 aaKnown RBP19.31■□□□□ 0.68
RPS6KC1-207ENST00000543470 ARXQ96QS3 562 aa19.31■□□□□ 0.68
RPS6KC1-207ENST00000543470 TIAM1Q13009 1591 aa19.31■□□□□ 0.68
RPS6KC1-207ENST00000543470 WASHC2AQ641Q2 1341 aa19.3■□□□□ 0.68
RPS6KC1-207ENST00000543470 PEG3Q9GZU2 1588 aa19.29■□□□□ 0.68
RPS6KC1-207ENST00000543470 MPHOSPH9Q99550 1183 aa19.29■□□□□ 0.68
RPS6KC1-207ENST00000543470 NOP58Q9Y2X3 529 aaKnown RBP19.29■□□□□ 0.68
RPS6KC1-207ENST00000543470 FGD5Q6ZNL6 1462 aa19.27■□□□□ 0.68
RPS6KC1-207ENST00000543470 PRKRIP1Q9H875 184 aaPredicted RBP19.26■□□□□ 0.67
RPS6KC1-207ENST00000543470 TDRD9Q8NDG6 1382 aaKnown RBP19.26■□□□□ 0.67
RPS6KC1-207ENST00000543470 CADPSQ9ULU8 1353 aa19.26■□□□□ 0.67
RPS6KC1-207ENST00000543470 HSP90AA1P07900 732 aaKnown RBP19.26■□□□□ 0.67
RPS6KC1-207ENST00000543470 FANCIQ9NVI1 1328 aa19.24■□□□□ 0.67
RPS6KC1-207ENST00000543470 FGD6Q6ZV73 1430 aa19.24■□□□□ 0.67
RPS6KC1-207ENST00000543470 FMN1Q68DA7 1419 aa19.23■□□□□ 0.67
RPS6KC1-207ENST00000543470 TSPY4P0CV99 314 aa19.22■□□□□ 0.67
RPS6KC1-207ENST00000543470 TSPY10P0CW01 314 aa19.22■□□□□ 0.67
RPS6KC1-207ENST00000543470 RAD54L2Q9Y4B4 1467 aa19.21■□□□□ 0.67
RPS6KC1-207ENST00000543470 UPF2Q9HAU5 1272 aaKnown RBP19.21■□□□□ 0.66
RPS6KC1-207ENST00000543470 CFTRP13569 1480 aa19.2■□□□□ 0.66
RPS6KC1-207ENST00000543470 NCAPD3P42695 1498 aa19.2■□□□□ 0.66
RPS6KC1-207ENST00000543470 UACAQ9BZF9 1416 aa19.19■□□□□ 0.66
RPS6KC1-207ENST00000543470 BIVM-ERCC5R4GMW8 1640 aa19.18■□□□□ 0.66
RPS6KC1-207ENST00000543470 WDR43Q15061 677 aaKnown RBP eCLIP19.17■□□□□ 0.66
RPS6KC1-207ENST00000543470 ERICH6BQ5W0A0 696 aa19.17■□□□□ 0.66
RPS6KC1-207ENST00000543470 RGL3Q3MIN7 710 aa19.16■□□□□ 0.66
RPS6KC1-207ENST00000543470 GOLGA6L2Q8N9W4 650 aaPredicted RBP19.16■□□□□ 0.66
RPS6KC1-207ENST00000543470 SENP3Q9H4L4 574 aaPredicted RBP19.16■□□□□ 0.66
RPS6KC1-207ENST00000543470 LAS1LQ9Y4W2 734 aaKnown RBP19.16■□□□□ 0.66
RPS6KC1-207ENST00000543470 C11orf95C9JLR9 678 aaPredicted RBP19.14■□□□□ 0.65
RPS6KC1-207ENST00000543470 RTN4Q9NQC3 1192 aaKnown RBP19.13■□□□□ 0.65
RPS6KC1-207ENST00000543470 ZBED9Q6R2W3 1325 aa19.11■□□□□ 0.65
RPS6KC1-207ENST00000543470 PCF11O94913 1555 aaKnown RBP19.11■□□□□ 0.65
RPS6KC1-207ENST00000543470 CARD11Q9BXL7 1154 aa19.11■□□□□ 0.65
RPS6KC1-207ENST00000543470 CASKIN1Q8WXD9 1431 aa19.1■□□□□ 0.65
RPS6KC1-207ENST00000543470 PAK3O75914 559 aaPredicted RBP19.08■□□□□ 0.65
RPS6KC1-207ENST00000543470 CCDC7Q96M83 1385 aa19.08■□□□□ 0.65
RPS6KC1-207ENST00000543470 NUDCQ9Y266 331 aa19.08■□□□□ 0.64
RPS6KC1-207ENST00000543470 STAG3Q9UJ98 1225 aa19.07■□□□□ 0.64
RPS6KC1-207ENST00000543470 KIF7Q2M1P5 1343 aa19.07■□□□□ 0.64
RPS6KC1-207ENST00000543470 NBPF8Q3BBV2 869 aa19.07■□□□□ 0.64
RPS6KC1-207ENST00000543470 FANCD2Q9BXW9 1451 aa19.07■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms