RNA–Protein interactions for RNA: ENST00000543162.1

DDB1-221, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 4

Gene DDB1, Length 575 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-221ENST00000543162 ZNF777Q9ULD5 760 aaPredicted RBP16.19■□□□□ 0.18
DDB1-221ENST00000543162 CDC42BPBQ9Y5S2 1711 aa16.19■□□□□ 0.18
DDB1-221ENST00000543162 ARHGAP5Q13017 1502 aa16.19■□□□□ 0.18
DDB1-221ENST00000543162 GLI2P10070 1586 aa16.17■□□□□ 0.18
DDB1-221ENST00000543162 ZNF644Q9H582 1327 aaPredicted RBP16.17■□□□□ 0.18
DDB1-221ENST00000543162 CAMSAP2Q08AD1 1489 aa16.16■□□□□ 0.18
DDB1-221ENST00000543162 ARAP3Q8WWN8 1544 aa16.16■□□□□ 0.18
DDB1-221ENST00000543162 EFCAB2Q5VUJ9 269 aa16.16■□□□□ 0.18
DDB1-221ENST00000543162 CD109Q6YHK3 1445 aa16.16■□□□□ 0.18
DDB1-221ENST00000543162 DIP2BQ9P265 1576 aa16.16■□□□□ 0.18
DDB1-221ENST00000543162 ITGAEP38570 1179 aa16.15■□□□□ 0.18
DDB1-221ENST00000543162 FAM69CQ0P6D2 419 aa16.15■□□□□ 0.18
DDB1-221ENST00000543162 SAMD9LQ8IVG5 1584 aa16.13■□□□□ 0.17
DDB1-221ENST00000543162 MAP3K4Q9Y6R4 1608 aa16.12■□□□□ 0.17
DDB1-221ENST00000543162 FANCAO15360 1455 aa16.11■□□□□ 0.17
DDB1-221ENST00000543162 PLEKHH2Q8IVE3 1493 aa16.11■□□□□ 0.17
DDB1-221ENST00000543162 CFAP74Q9C0B2 1584 aa16.09■□□□□ 0.17
DDB1-221ENST00000543162 DNMT1P26358 1616 aaKnown RBP16.08■□□□□ 0.17
DDB1-221ENST00000543162 KIF13AQ9H1H9 1805 aa16.08■□□□□ 0.17
DDB1-221ENST00000543162 DAPK1P53355 1430 aa16.08■□□□□ 0.16
DDB1-221ENST00000543162 KIAA1107Q9UPP5 1409 aa16.08■□□□□ 0.16
DDB1-221ENST00000543162 HNRNPMP52272 730 aaKnown RBP eCLIP16.07■□□□□ 0.162e-7■■■■□ 25.2
DDB1-221ENST00000543162 ABCC5O15440 1437 aa16.07■□□□□ 0.16
DDB1-221ENST00000543162 SYCP2Q9BX26 1530 aa16.07■□□□□ 0.16
DDB1-221ENST00000543162 ARHGEF5Q12774 1597 aa16.06■□□□□ 0.16
DDB1-221ENST00000543162 ABCC1P33527 1531 aa16.06■□□□□ 0.16
DDB1-221ENST00000543162 MBD5Q9P267 1494 aa16.05■□□□□ 0.16
DDB1-221ENST00000543162 PTPRKQ15262 1439 aa16.05■□□□□ 0.16
DDB1-221ENST00000543162 AKNAQ7Z591 1439 aa16.05■□□□□ 0.16
DDB1-221ENST00000543162 RSPH4AQ5TD94 716 aa16.05■□□□□ 0.16
DDB1-221ENST00000543162 NEO1Q92859 1461 aa16.04■□□□□ 0.16
DDB1-221ENST00000543162 ADGRL1O94910 1474 aa16.03■□□□□ 0.16
DDB1-221ENST00000543162 CCDC141Q6ZP82 1450 aa16.03■□□□□ 0.16
DDB1-221ENST00000543162 TSPOAP1O95153 1857 aa16.03■□□□□ 0.16
DDB1-221ENST00000543162 CROCC2H7BZ55 1655 aa16.03■□□□□ 0.16
DDB1-221ENST00000543162 ARHGEF12Q9NZN5 1544 aa16.03■□□□□ 0.16
DDB1-221ENST00000543162 TSPY4P0CV99 314 aa16.02■□□□□ 0.16
DDB1-221ENST00000543162 TSPY10P0CW01 314 aa16.02■□□□□ 0.16
DDB1-221ENST00000543162 CHIC2Q9UKJ5 165 aa16.02■□□□□ 0.16
DDB1-221ENST00000543162 TEX14Q8IWB6 1497 aa16.02■□□□□ 0.15
DDB1-221ENST00000543162 SCAPERQ9BY12 1400 aa16.02■□□□□ 0.15
DDB1-221ENST00000543162 SHANK2Q9UPX8 1470 aa16.01■□□□□ 0.15
DDB1-221ENST00000543162 PPRC1Q5VV67 1664 aaKnown RBP16■□□□□ 0.15
DDB1-221ENST00000543162 TRHP20396 242 aaPredicted RBP16■□□□□ 0.15
DDB1-221ENST00000543162 C9orf84Q5VXU9 1444 aa15.99■□□□□ 0.15
DDB1-221ENST00000543162 TRAPPC8Q9Y2L5 1435 aa15.99■□□□□ 0.15
DDB1-221ENST00000543162 ROCK1Q13464 1354 aa15.99■□□□□ 0.15
DDB1-221ENST00000543162 ADGBQ8N7X0 1667 aa15.98■□□□□ 0.15
DDB1-221ENST00000543162 HFM1A2PYH4 1435 aa15.96■□□□□ 0.15
DDB1-221ENST00000543162 AFAP1Q8N556 730 aa15.96■□□□□ 0.15
DDB1-221ENST00000543162 RRP7BPQ9NSQ0 103 aa15.96■□□□□ 0.15
DDB1-221ENST00000543162 ANKRD30AQ9BXX3 1397 aa15.96■□□□□ 0.15
DDB1-221ENST00000543162 ADGRL2O95490 1459 aa15.96■□□□□ 0.14
DDB1-221ENST00000543162 MAST1Q9Y2H9 1570 aa15.96■□□□□ 0.14
DDB1-221ENST00000543162 SETD5Q9C0A6 1442 aa15.95■□□□□ 0.14
DDB1-221ENST00000543162 DENND4BO75064 1496 aaPredicted RBP15.95■□□□□ 0.14
DDB1-221ENST00000543162 ZNF518AQ6AHZ1 1483 aa15.95■□□□□ 0.14
DDB1-221ENST00000543162 SPAG9O60271 1321 aaKnown RBP15.94■□□□□ 0.14
DDB1-221ENST00000543162 NCOA1Q15788 1441 aa15.94■□□□□ 0.14
DDB1-221ENST00000543162 POGZQ7Z3K3 1410 aa15.94■□□□□ 0.14
DDB1-221ENST00000543162 NAIPQ13075 1403 aa15.94■□□□□ 0.14
DDB1-221ENST00000543162 GCC2Q8IWJ2 1684 aa15.92■□□□□ 0.14
DDB1-221ENST00000543162 RAB3GAP2Q9H2M9 1393 aa15.91■□□□□ 0.14
DDB1-221ENST00000543162 RTEL1-TNFRSF6BF6WH68 1400 aa15.91■□□□□ 0.14
DDB1-221ENST00000543162 RAPGEF3O95398 923 aa15.9■□□□□ 0.14
DDB1-221ENST00000543162 MYT1LQ9UL68 1186 aa15.9■□□□□ 0.14
DDB1-221ENST00000543162 PLXNC1O60486 1568 aa15.9■□□□□ 0.14
DDB1-221ENST00000543162 KDM5CP41229 1560 aa15.9■□□□□ 0.14
DDB1-221ENST00000543162 ATP7AQ04656 1500 aa15.89■□□□□ 0.13
DDB1-221ENST00000543162 ZFYVE16Q7Z3T8 1539 aa15.89■□□□□ 0.13
DDB1-221ENST00000543162 KIF15Q9NS87 1388 aa15.89■□□□□ 0.13
DDB1-221ENST00000543162 RICTORQ6R327 1708 aa15.89■□□□□ 0.13
DDB1-221ENST00000543162 INO80Q9ULG1 1556 aaPredicted RBP15.89■□□□□ 0.13
DDB1-221ENST00000543162 HRCP23327 699 aa15.88■□□□□ 0.13
DDB1-221ENST00000543162 HECW2Q9P2P5 1572 aa15.87■□□□□ 0.13
DDB1-221ENST00000543162 MLH3Q9UHC1 1453 aa15.86■□□□□ 0.13
DDB1-221ENST00000543162 FRMPD1Q5SYB0 1578 aa15.86■□□□□ 0.13
DDB1-221ENST00000543162 KIDINS220Q9ULH0 1771 aa15.85■□□□□ 0.13
DDB1-221ENST00000543162 ANKRD50Q9ULJ7 1429 aa15.85■□□□□ 0.13
DDB1-221ENST00000543162 DUOX2Q9NRD8 1548 aa15.84■□□□□ 0.13
DDB1-221ENST00000543162 KDM6BO15054 1643 aa15.84■□□□□ 0.13
DDB1-221ENST00000543162 ZMYM4Q5VZL5 1548 aa15.84■□□□□ 0.13
DDB1-221ENST00000543162 COL17A1Q9UMD9 1497 aaPredicted RBP15.83■□□□□ 0.12
DDB1-221ENST00000543162 ACIN1Q9UKV3 1341 aaKnown RBP15.82■□□□□ 0.12
DDB1-221ENST00000543162 MAGI2Q86UL8 1455 aa15.8■□□□□ 0.12
DDB1-221ENST00000543162 ERBINQ96RT1 1412 aa15.8■□□□□ 0.12
DDB1-221ENST00000543162 CCER1Q8TC90 406 aaPredicted RBP15.79■□□□□ 0.12
DDB1-221ENST00000543162 TRIM52Q96A61 297 aa15.79■□□□□ 0.12
DDB1-221ENST00000543162 ABCA6Q8N139 1617 aa15.79■□□□□ 0.12
DDB1-221ENST00000543162 DHX29Q7Z478 1369 aaKnown RBP15.78■□□□□ 0.12
DDB1-221ENST00000543162 A2MP01023 1474 aa15.78■□□□□ 0.12
DDB1-221ENST00000543162 DIP2CQ9Y2E4 1556 aa15.77■□□□□ 0.11
DDB1-221ENST00000543162 YEATS2Q9ULM3 1422 aa15.77■□□□□ 0.11
DDB1-221ENST00000543162 DHX57Q6P158 1386 aaKnown RBP15.75■□□□□ 0.11
DDB1-221ENST00000543162 EIF2AK4Q9P2K8 1649 aaKnown RBP15.74■□□□□ 0.11
DDB1-221ENST00000543162 ATP10AO60312 1499 aa15.73■□□□□ 0.11
DDB1-221ENST00000543162 UNC13BO14795 1591 aa15.72■□□□□ 0.11
DDB1-221ENST00000543162 KIF3BO15066 747 aa15.72■□□□□ 0.11
DDB1-221ENST00000543162 ARHGEF40Q8TER5 1519 aa15.72■□□□□ 0.11
DDB1-221ENST00000543162 NUP155O75694 1391 aa15.72■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms