RNA–Protein interactions for RNA: ENST00000542199.1

MRPS35-204, Transcript of mitochondrial ribosomal protein S35, humanhuman

TSL 3

Gene MRPS35, Length 750 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS35-204ENST00000542199 SEC24BO95487 1268 aa17.59■□□□□ 0.41
MRPS35-204ENST00000542199 SLC39A7Q92504 469 aa17.59■□□□□ 0.41
MRPS35-204ENST00000542199 E2F4Q16254 413 aa17.58■□□□□ 0.4
MRPS35-204ENST00000542199 DDX27Q96GQ7 796 aaKnown RBP17.58■□□□□ 0.4
MRPS35-204ENST00000542199 TMEM121BQ9BXQ6 578 aaPredicted RBP17.57■□□□□ 0.4
MRPS35-204ENST00000542199 METRNQ9UJH8 293 aa17.57■□□□□ 0.4
MRPS35-204ENST00000542199 C7P10643 843 aa17.53■□□□□ 0.4
MRPS35-204ENST00000542199 PRKCSHP14314 528 aaPredicted RBP17.53■□□□□ 0.4
MRPS35-204ENST00000542199 GPHNQ9NQX3 736 aaPredicted RBP17.53■□□□□ 0.4
MRPS35-204ENST00000542199 G3V3G9 751 aa17.51■□□□□ 0.39
MRPS35-204ENST00000542199 PPP1R15BQ5SWA1 713 aa17.49■□□□□ 0.39
MRPS35-204ENST00000542199 L3MBTL3Q96JM7 780 aaPredicted RBP17.48■□□□□ 0.39
MRPS35-204ENST00000542199 DSG2Q14126 1118 aa17.46■□□□□ 0.39
MRPS35-204ENST00000542199 ARHGEF1Q92888 912 aaKnown RBP17.46■□□□□ 0.39
MRPS35-204ENST00000542199 TPRNQ4KMQ1 711 aa17.45■□□□□ 0.38
MRPS35-204ENST00000542199 TMC2Q8TDI7 906 aa17.45■□□□□ 0.38
MRPS35-204ENST00000542199 C2orf72A6NCS6 295 aa17.43■□□□□ 0.38
MRPS35-204ENST00000542199 CAMK2BQ13554 666 aa17.43■□□□□ 0.38
MRPS35-204ENST00000542199 TMEM92Q6UXU6 159 aa17.43■□□□□ 0.38
MRPS35-204ENST00000542199 KIF3CO14782 793 aa17.41■□□□□ 0.38
MRPS35-204ENST00000542199 CCDC180Q9P1Z9 1646 aa17.39■□□□□ 0.38
MRPS35-204ENST00000542199 FOXK1P85037 733 aa17.38■□□□□ 0.37
MRPS35-204ENST00000542199 PLPP6Q8IY26 295 aa17.34■□□□□ 0.37
MRPS35-204ENST00000542199 EMILIN3Q9NT22 766 aa17.34■□□□□ 0.37
MRPS35-204ENST00000542199 SEMA3EO15041 775 aa17.33■□□□□ 0.36
MRPS35-204ENST00000542199 ARIH1Q9Y4X5 557 aaPredicted RBP17.32■□□□□ 0.36
MRPS35-204ENST00000542199 ABCC9O60706 1549 aa17.31■□□□□ 0.36
MRPS35-204ENST00000542199 C3orf67Q6ZVT6 689 aa17.29■□□□□ 0.36
MRPS35-204ENST00000542199 DPYSL4O14531 572 aa17.27■□□□□ 0.36
MRPS35-204ENST00000542199 TESPA1A2RU30 521 aaPredicted RBP17.24■□□□□ 0.35
MRPS35-204ENST00000542199 LMOD2Q6P5Q4 547 aa17.21■□□□□ 0.35
MRPS35-204ENST00000542199 DHX30Q7L2E3 1194 aaKnown RBP eCLIP17.21■□□□□ 0.35
MRPS35-204ENST00000542199 UPF1Q92900 1129 aaKnown RBP eCLIP17.18■□□□□ 0.34
MRPS35-204ENST00000542199 POTEJP0CG39 1038 aa17.17■□□□□ 0.34
MRPS35-204ENST00000542199 POTEB2H3BUK9 544 aa17.16■□□□□ 0.34
MRPS35-204ENST00000542199 EIF2AK3Q9NZJ5 1116 aaKnown RBP17.16■□□□□ 0.34
MRPS35-204ENST00000542199 MLLT3P42568 568 aaPredicted RBP17.14■□□□□ 0.33
MRPS35-204ENST00000542199 PDIA6Q15084 440 aa17.13■□□□□ 0.33
MRPS35-204ENST00000542199 OXER1Q8TDS5 423 aa17.11■□□□□ 0.33
MRPS35-204ENST00000542199 TULP1O00294 542 aaPredicted RBP17.1■□□□□ 0.33
MRPS35-204ENST00000542199 SPDYE16A6NNV3 312 aaPredicted RBP17.08■□□□□ 0.32
MRPS35-204ENST00000542199 MAP3K9P80192 1104 aa17.08■□□□□ 0.32
MRPS35-204ENST00000542199 SMYD5Q6GMV2 418 aa17.02■□□□□ 0.32
MRPS35-204ENST00000542199 RBM26Q5T8P6 1007 aaKnown RBP16.99■□□□□ 0.31
MRPS35-204ENST00000542199 PTCD2Q8WV60 388 aaKnown RBP16.98■□□□□ 0.31
MRPS35-204ENST00000542199 SLC34A2O95436 690 aa16.96■□□□□ 0.31
MRPS35-204ENST00000542199 ZC3H15Q8WU90 426 aaKnown RBP16.96■□□□□ 0.31
MRPS35-204ENST00000542199 EVI5O60447 810 aa16.95■□□□□ 0.3
MRPS35-204ENST00000542199 GRXCR2A6NFK2 248 aa16.93■□□□□ 0.3
MRPS35-204ENST00000542199 SLAIN1Q8ND83 568 aa16.93■□□□□ 0.3
MRPS35-204ENST00000542199 TBC1D12O60347 775 aa16.92■□□□□ 0.3
MRPS35-204ENST00000542199 DDX12PQ92771 950 aa16.9■□□□□ 0.3
MRPS35-204ENST00000542199 SCUBE2Q9NQ36 999 aa16.9■□□□□ 0.3
MRPS35-204ENST00000542199 PCDHGA4Q9Y5G9 962 aa16.88■□□□□ 0.29
MRPS35-204ENST00000542199 HOXB3P14651 431 aaPredicted RBP16.85■□□□□ 0.29
MRPS35-204ENST00000542199 PTGER2P43116 358 aa16.85■□□□□ 0.29
MRPS35-204ENST00000542199 MAMSTRQ6ZN01 415 aa16.85■□□□□ 0.29
MRPS35-204ENST00000542199 GPIHBP1Q8IV16 184 aa16.85■□□□□ 0.29
MRPS35-204ENST00000542199 OSBPP22059 807 aa16.83■□□□□ 0.28
MRPS35-204ENST00000542199 PRIM1P49642 420 aaKnown RBP16.82■□□□□ 0.28
MRPS35-204ENST00000542199 ZNF316A6NFI3 1004 aaPredicted RBP16.81■□□□□ 0.28
MRPS35-204ENST00000542199 ANO8Q9HCE9 1232 aaPredicted RBP16.81■□□□□ 0.28
MRPS35-204ENST00000542199 KHSRPQ92945 711 aaKnown RBP eCLIP16.8■□□□□ 0.287e-8■■■■■ 32
MRPS35-204ENST00000542199 ZMYND10O75800 440 aa16.79■□□□□ 0.28
MRPS35-204ENST00000542199 DOK7Q18PE1 504 aa16.77■□□□□ 0.28
MRPS35-204ENST00000542199 KDM4FA0A1W2PPD8 638 aa16.76■□□□□ 0.27
MRPS35-204ENST00000542199 GPR37O15354 613 aa16.76■□□□□ 0.27
MRPS35-204ENST00000542199 ARSIQ5FYB1 569 aa16.75■□□□□ 0.27
MRPS35-204ENST00000542199 SLC24A3Q9HC58 644 aa16.75■□□□□ 0.27
MRPS35-204ENST00000542199 NUTM2FA1L443 756 aa16.73■□□□□ 0.27
MRPS35-204ENST00000542199 NUDT7P0C024 238 aa16.73■□□□□ 0.27
MRPS35-204ENST00000542199 OTUD5Q96G74 571 aa16.73■□□□□ 0.27
MRPS35-204ENST00000542199 BARGINQ6ZT62 677 aa16.72■□□□□ 0.27
MRPS35-204ENST00000542199 GPR153Q6NV75 609 aa16.69■□□□□ 0.26
MRPS35-204ENST00000542199 PCDHGA10Q9Y5H3 936 aa16.69■□□□□ 0.26
MRPS35-204ENST00000542199 PHF14O94880 888 aa16.68■□□□□ 0.26
MRPS35-204ENST00000542199 RIMBP2O15034 1052 aa16.67■□□□□ 0.26
MRPS35-204ENST00000542199 ZNF710Q8N1W2 664 aa16.67■□□□□ 0.26
MRPS35-204ENST00000542199 EN1Q05925 392 aaPredicted RBP16.65■□□□□ 0.26
MRPS35-204ENST00000542199 RBM33Q96EV2 1170 aaKnown RBP16.65■□□□□ 0.26
MRPS35-204ENST00000542199 ZSWIM6Q9HCJ5 1215 aa16.65■□□□□ 0.26
MRPS35-204ENST00000542199 LHX8Q68G74 356 aa16.64■□□□□ 0.25
MRPS35-204ENST00000542199 CDHR5Q9HBB8 845 aa16.64■□□□□ 0.25
MRPS35-204ENST00000542199 JPH4Q96JJ6 628 aa16.63■□□□□ 0.25
MRPS35-204ENST00000542199 EPAS1Q99814 870 aa16.63■□□□□ 0.25
MRPS35-204ENST00000542199 FOSBP53539 338 aa16.62■□□□□ 0.25
MRPS35-204ENST00000542199 MAP3K7O43318 606 aa16.61■□□□□ 0.25
MRPS35-204ENST00000542199 TYW1BQ6NUM6 668 aa16.61■□□□□ 0.25
MRPS35-204ENST00000542199 TSR1Q2NL82 804 aaKnown RBP16.6■□□□□ 0.25
MRPS35-204ENST00000542199 ZNF454Q8N9F8 522 aa16.59■□□□□ 0.25
MRPS35-204ENST00000542199 KRI1Q8N9T8 703 aaKnown RBP16.59■□□□□ 0.25
MRPS35-204ENST00000542199 FCHSD2O94868 740 aa16.57■□□□□ 0.24
MRPS35-204ENST00000542199 FECHP22830 423 aa16.57■□□□□ 0.24
MRPS35-204ENST00000542199 PTGDRQ13258 359 aa16.57■□□□□ 0.24
MRPS35-204ENST00000542199 LHX6Q9UPM6 363 aa16.57■□□□□ 0.24
MRPS35-204ENST00000542199 SNPHO15079 494 aa16.56■□□□□ 0.24
MRPS35-204ENST00000542199 GNPATO15228 680 aa16.55■□□□□ 0.24
MRPS35-204ENST00000542199 BRPF1P55201 1214 aaPredicted RBP16.55■□□□□ 0.24
MRPS35-204ENST00000542199 FBXW7Q969H0 707 aa16.54■□□□□ 0.24
MRPS35-204ENST00000542199 HIC1Q14526 733 aa16.53■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms