RNA–Protein interactions for RNA: ENST00000542001.5

VARS2-212, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VARS2, Length 4,064 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-212ENST00000542001 NUTM2DQ5VT03 806 aaPredicted RBP21.23■□□□□ 0.99
VARS2-212ENST00000542001 ROCK2O75116 1388 aaKnown RBP21.23■□□□□ 0.99
VARS2-212ENST00000542001 GGT6Q6P531 493 aa21.22■□□□□ 0.99
VARS2-212ENST00000542001 GOLGA6L2Q8N9W4 650 aaPredicted RBP21.22■□□□□ 0.99
VARS2-212ENST00000542001 PLIN1O60240 522 aa21.21■□□□□ 0.99
VARS2-212ENST00000542001 NBPF8Q3BBV2 869 aa21.21■□□□□ 0.99
VARS2-212ENST00000542001 TMF1P82094 1093 aa21.2■□□□□ 0.98
VARS2-212ENST00000542001 WDR97A6NE52 1622 aa21.19■□□□□ 0.98
VARS2-212ENST00000542001 RTN4Q9NQC3 1192 aaKnown RBP21.19■□□□□ 0.98
VARS2-212ENST00000542001 ANKRD30AQ9BXX3 1397 aa21.18■□□□□ 0.98
VARS2-212ENST00000542001 ERICH3Q5RHP9 1530 aa21.18■□□□□ 0.98
VARS2-212ENST00000542001 KIF7Q2M1P5 1343 aa21.17■□□□□ 0.98
VARS2-212ENST00000542001 ESF1Q9H501 851 aaKnown RBP21.17■□□□□ 0.98
VARS2-212ENST00000542001 NOP58Q9Y2X3 529 aaKnown RBP21.17■□□□□ 0.98
VARS2-212ENST00000542001 CCDC146Q8IYE0 955 aa21.17■□□□□ 0.98
VARS2-212ENST00000542001 NCOA2Q15596 1464 aa21.17■□□□□ 0.98
VARS2-212ENST00000542001 MYOM3Q5VTT5 1437 aa21.16■□□□□ 0.98
VARS2-212ENST00000542001 RCAN3Q9UKA8 241 aa21.15■□□□□ 0.98
VARS2-212ENST00000542001 STK26Q9P289 416 aa21.13■□□□□ 0.97
VARS2-212ENST00000542001 UACAQ9BZF9 1416 aa21.13■□□□□ 0.97
VARS2-212ENST00000542001 NUDCQ9Y266 331 aa21.13■□□□□ 0.97
VARS2-212ENST00000542001 C11orf95C9JLR9 678 aaPredicted RBP21.12■□□□□ 0.97
VARS2-212ENST00000542001 EIF5BO60841 1220 aaKnown RBP21.12■□□□□ 0.97
VARS2-212ENST00000542001 USP47Q96K76 1375 aa21.12■□□□□ 0.97
VARS2-212ENST00000542001 CARMIL2Q6F5E8 1435 aa21.11■□□□□ 0.97
VARS2-212ENST00000542001 U2SURPO15042 1029 aaKnown RBP21.11■□□□□ 0.97
VARS2-212ENST00000542001 CASKIN1Q8WXD9 1431 aa21.11■□□□□ 0.97
VARS2-212ENST00000542001 KIF3BO15066 747 aa21.11■□□□□ 0.97
VARS2-212ENST00000542001 POLA1P09884 1462 aaPredicted RBP21.1■□□□□ 0.97
VARS2-212ENST00000542001 PANK3Q9H999 370 aa21.09■□□□□ 0.97
VARS2-212ENST00000542001 HSP90AA1P07900 732 aaKnown RBP21.08■□□□□ 0.97
VARS2-212ENST00000542001 MLECQ14165 292 aa21.08■□□□□ 0.97
VARS2-212ENST00000542001 KTN1Q86UP2 1357 aaKnown RBP21.07■□□□□ 0.96
VARS2-212ENST00000542001 UPF2Q9HAU5 1272 aaKnown RBP21.07■□□□□ 0.96
VARS2-212ENST00000542001 CCDC7Q96M83 1385 aa21.07■□□□□ 0.96
VARS2-212ENST00000542001 EXOC6Q8TAG9 804 aa21.07■□□□□ 0.96
VARS2-212ENST00000542001 CDCA8Q53HL2 280 aa21.04■□□□□ 0.96
VARS2-212ENST00000542001 TIAM1Q13009 1591 aa21.04■□□□□ 0.96
VARS2-212ENST00000542001 SOX12O15370 315 aa21.04■□□□□ 0.96
VARS2-212ENST00000542001 UNC13AQ9UPW8 1703 aa21.03■□□□□ 0.96
VARS2-212ENST00000542001 TOPBP1Q92547 1522 aa21.03■□□□□ 0.96
VARS2-212ENST00000542001 EFCAB2Q5VUJ9 269 aa21.02■□□□□ 0.95
VARS2-212ENST00000542001 DEKP35659 375 aaKnown RBP21.01■□□□□ 0.95
VARS2-212ENST00000542001 NLRP13Q86W25 1043 aa21.01■□□□□ 0.95
VARS2-212ENST00000542001 RRP7AQ9Y3A4 280 aaKnown RBP21.01■□□□□ 0.95
VARS2-212ENST00000542001 NBPF1Q3BBV0 1214 aa21.01■□□□□ 0.95
VARS2-212ENST00000542001 SPRYD3Q8NCJ5 442 aa20.99■□□□□ 0.95
VARS2-212ENST00000542001 CLUAP1Q96AJ1 413 aa20.99■□□□□ 0.95
VARS2-212ENST00000542001 POGKQ9P215 609 aa20.99■□□□□ 0.95
VARS2-212ENST00000542001 RALBP1Q15311 655 aa20.99■□□□□ 0.95
VARS2-212ENST00000542001 MORC1Q86VD1 984 aa20.99■□□□□ 0.95
VARS2-212ENST00000542001 ZBED9Q6R2W3 1325 aa20.98■□□□□ 0.95
VARS2-212ENST00000542001 SLC4A3P48751 1232 aa20.98■□□□□ 0.95
VARS2-212ENST00000542001 TRAK1Q9UPV9 953 aa20.98■□□□□ 0.95
VARS2-212ENST00000542001 ZBTB7CA1YPR0 619 aa20.98■□□□□ 0.95
VARS2-212ENST00000542001 CDCA7LQ96GN5 454 aa20.97■□□□□ 0.95
VARS2-212ENST00000542001 SRPK2P78362 688 aaKnown RBP20.97■□□□□ 0.95
VARS2-212ENST00000542001 CC2D2AQ9P2K1 1620 aa20.96■□□□□ 0.95
VARS2-212ENST00000542001 FTSJ3Q8IY81 847 aaKnown RBP20.96■□□□□ 0.95
VARS2-212ENST00000542001 PRG4Q92954 1404 aaPredicted RBP20.96■□□□□ 0.95
VARS2-212ENST00000542001 CFAP53Q96M91 514 aa20.95■□□□□ 0.94
VARS2-212ENST00000542001 BCL2L13Q9BXK5 485 aa20.95■□□□□ 0.94
VARS2-212ENST00000542001 NAIPQ13075 1403 aa20.95■□□□□ 0.94
VARS2-212ENST00000542001 FYCO1Q9BQS8 1478 aa20.94■□□□□ 0.94
VARS2-212ENST00000542001 SPAG9O60271 1321 aaKnown RBP20.93■□□□□ 0.94
VARS2-212ENST00000542001 PTPRGP23470 1445 aa20.93■□□□□ 0.94
VARS2-212ENST00000542001 CDK13Q14004 1512 aaKnown RBP20.92■□□□□ 0.94
VARS2-212ENST00000542001 C14orf37Q86TY3 774 aa20.92■□□□□ 0.94
VARS2-212ENST00000542001 PRDM2Q13029 1718 aa20.91■□□□□ 0.94
VARS2-212ENST00000542001 MYBBP1AQ9BQG0 1328 aaKnown RBP20.91■□□□□ 0.94
VARS2-212ENST00000542001 PCF11O94913 1555 aaKnown RBP20.91■□□□□ 0.94
VARS2-212ENST00000542001 CCDC144AA2RUR9 1427 aa20.91■□□□□ 0.94
VARS2-212ENST00000542001 HFM1A2PYH4 1435 aa20.9■□□□□ 0.94
VARS2-212ENST00000542001 U2AF1L5P0DN76 240 aaPredicted RBP20.9■□□□□ 0.94
VARS2-212ENST00000542001 U2AF1Q01081 240 aaKnown RBP eCLIP20.9■□□□□ 0.94
VARS2-212ENST00000542001 HMGXB3Q12766 1538 aa20.9■□□□□ 0.94
VARS2-212ENST00000542001 AFAP1Q8N556 730 aa20.89■□□□□ 0.93
VARS2-212ENST00000542001 CNTLNQ9NXG0 1405 aa20.89■□□□□ 0.93
VARS2-212ENST00000542001 KIF15Q9NS87 1388 aa20.89■□□□□ 0.93
VARS2-212ENST00000542001 CRBNQ96SW2 442 aa20.88■□□□□ 0.93
VARS2-212ENST00000542001 ARID4BQ4LE39 1312 aaPredicted RBP20.88■□□□□ 0.93
VARS2-212ENST00000542001 ANKRD50Q9ULJ7 1429 aa20.88■□□□□ 0.93
VARS2-212ENST00000542001 AKNAQ7Z591 1439 aa20.87■□□□□ 0.93
VARS2-212ENST00000542001 MAPK8IP3Q9UPT6 1336 aa20.87■□□□□ 0.93
VARS2-212ENST00000542001 PTPRKQ15262 1439 aa20.87■□□□□ 0.93
VARS2-212ENST00000542001 APAF1O14727 1248 aa20.86■□□□□ 0.93
VARS2-212ENST00000542001 RRP1P56182 461 aaKnown RBP20.85■□□□□ 0.93
VARS2-212ENST00000542001 ERICH6BQ5W0A0 696 aa20.85■□□□□ 0.93
VARS2-212ENST00000542001 SKAP1Q86WV1 359 aa20.84■□□□□ 0.93
VARS2-212ENST00000542001 GOLGA2Q08379 1002 aa20.84■□□□□ 0.93
VARS2-212ENST00000542001 TPRNQ4KMQ1 711 aa20.83■□□□□ 0.93
VARS2-212ENST00000542001 DDRGK1Q96HY6 314 aa20.83■□□□□ 0.93
VARS2-212ENST00000542001 SLKQ9H2G2 1235 aaPredicted RBP20.83■□□□□ 0.92
VARS2-212ENST00000542001 NUTM2FA1L443 756 aa20.83■□□□□ 0.92
VARS2-212ENST00000542001 KANK1Q14678 1352 aa20.82■□□□□ 0.92
VARS2-212ENST00000542001 IPO9Q96P70 1041 aaKnown RBP20.81■□□□□ 0.92
VARS2-212ENST00000542001 PEG3Q9GZU2 1588 aa20.8■□□□□ 0.92
VARS2-212ENST00000542001 PDE4AP27815 886 aa20.79■□□□□ 0.92
VARS2-212ENST00000542001 APBB1O00213 710 aa20.78■□□□□ 0.92
VARS2-212ENST00000542001 ADAMTS8Q9UP79 889 aa20.78■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms