RNA–Protein interactions for RNA: ENST00000540301.1

KLHL42-203, Transcript of kelch like family member 42, humanhuman

TSL 3

Gene KLHL42, Length 793 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KLHL42-203ENST00000540301 ZMYM4Q5VZL5 1548 aa14.3□□□□□ -0.12
KLHL42-203ENST00000540301 LTBP4Q8N2S1 1624 aa14.3□□□□□ -0.12
KLHL42-203ENST00000540301 UHRF1BP1Q6BDS2 1440 aa14.29□□□□□ -0.12
KLHL42-203ENST00000540301 MAGI2Q86UL8 1455 aa14.28□□□□□ -0.12
KLHL42-203ENST00000540301 ARHGEF12Q9NZN5 1544 aa14.27□□□□□ -0.12
KLHL42-203ENST00000540301 SETD1BQ9UPS6 1966 aaKnown RBP14.26□□□□□ -0.13
KLHL42-203ENST00000540301 CFAP74Q9C0B2 1584 aa14.25□□□□□ -0.13
KLHL42-203ENST00000540301 UBAP1LF5GYI3 381 aa14.24□□□□□ -0.13
KLHL42-203ENST00000540301 HECW1Q76N89 1606 aa14.23□□□□□ -0.13
KLHL42-203ENST00000540301 ATP10AO60312 1499 aa14.22□□□□□ -0.13
KLHL42-203ENST00000540301 RAPGEF6Q8TEU7 1601 aa14.22□□□□□ -0.13
KLHL42-203ENST00000540301 PLEKHD1A6NEE1 506 aa14.21□□□□□ -0.13
KLHL42-203ENST00000540301 C9orf84Q5VXU9 1444 aa14.21□□□□□ -0.13
KLHL42-203ENST00000540301 SCAPERQ9BY12 1400 aa14.18□□□□□ -0.14
KLHL42-203ENST00000540301 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP14.18□□□□□ -0.14
KLHL42-203ENST00000540301 NUP153P49790 1475 aaKnown RBP14.17□□□□□ -0.14
KLHL42-203ENST00000540301 NCOA1Q15788 1441 aa14.16□□□□□ -0.14
KLHL42-203ENST00000540301 MED1Q15648 1581 aaPredicted RBP14.16□□□□□ -0.14
KLHL42-203ENST00000540301 ZNF335Q9H4Z2 1342 aaPredicted RBP14.14□□□□□ -0.15
KLHL42-203ENST00000540301 PRXQ9BXM0 1461 aa14.13□□□□□ -0.15
KLHL42-203ENST00000540301 TRAPPC8Q9Y2L5 1435 aa14.13□□□□□ -0.15
KLHL42-203ENST00000540301 C3P01024 1663 aa14.12□□□□□ -0.15
KLHL42-203ENST00000540301 HSPA1LP34931 641 aa14.12□□□□□ -0.15
KLHL42-203ENST00000540301 SAMD9Q5K651 1589 aa14.12□□□□□ -0.15
KLHL42-203ENST00000540301 FOXD1Q16676 465 aa14.11□□□□□ -0.15
KLHL42-203ENST00000540301 ESF1Q9H501 851 aaKnown RBP14.11□□□□□ -0.15
KLHL42-203ENST00000540301 PLCH2O75038 1416 aa14.1□□□□□ -0.15
KLHL42-203ENST00000540301 SCAF1Q9H7N4 1312 aaKnown RBP14.1□□□□□ -0.15
KLHL42-203ENST00000540301 NCKAP5LQ9HCH0 1330 aa14.09□□□□□ -0.15
KLHL42-203ENST00000540301 CAMSAP1Q5T5Y3 1602 aa14.08□□□□□ -0.15
KLHL42-203ENST00000540301 MYT1LQ9UL68 1186 aa14.08□□□□□ -0.16
KLHL42-203ENST00000540301 PIP4K2BP78356 416 aa14.07□□□□□ -0.16
KLHL42-203ENST00000540301 EFCAB2Q5VUJ9 269 aa14.06□□□□□ -0.16
KLHL42-203ENST00000540301 AFAP1Q8N556 730 aa14.05□□□□□ -0.16
KLHL42-203ENST00000540301 ZNF518AQ6AHZ1 1483 aa14.04□□□□□ -0.16
KLHL42-203ENST00000540301 TOM1O60784 492 aa14.03□□□□□ -0.16
KLHL42-203ENST00000540301 RANGAP1P46060 587 aaPredicted RBP14.03□□□□□ -0.16
KLHL42-203ENST00000540301 PKD2Q13563 968 aa14.03□□□□□ -0.16
KLHL42-203ENST00000540301 REREQ9P2R6 1566 aa14.02□□□□□ -0.16
KLHL42-203ENST00000540301 DIP2CQ9Y2E4 1556 aa14.01□□□□□ -0.17
KLHL42-203ENST00000540301 CNTLNQ9NXG0 1405 aa14.01□□□□□ -0.17
KLHL42-203ENST00000540301 KDM5CP41229 1560 aa14□□□□□ -0.17
KLHL42-203ENST00000540301 AGLP35573 1532 aa14□□□□□ -0.17
KLHL42-203ENST00000540301 NPATQ14207 1427 aa13.99□□□□□ -0.17
KLHL42-203ENST00000540301 PPP6R1Q9UPN7 881 aa13.99□□□□□ -0.17
KLHL42-203ENST00000540301 PLA2R1Q13018 1463 aa13.98□□□□□ -0.17
KLHL42-203ENST00000540301 MYO5CQ9NQX4 1742 aa13.98□□□□□ -0.17
KLHL42-203ENST00000540301 ABCA6Q8N139 1617 aa13.97□□□□□ -0.17
KLHL42-203ENST00000540301 CDK13Q14004 1512 aaKnown RBP13.96□□□□□ -0.17
KLHL42-203ENST00000540301 ZMYM3Q14202 1370 aa13.96□□□□□ -0.18
KLHL42-203ENST00000540301 TCOF1Q13428 1488 aaKnown RBP13.95□□□□□ -0.18
KLHL42-203ENST00000540301 MLH3Q9UHC1 1453 aa13.95□□□□□ -0.18
KLHL42-203ENST00000540301 ARHGAP5Q13017 1502 aa13.93□□□□□ -0.18
KLHL42-203ENST00000540301 SUPT6HQ7KZ85 1726 aaKnown RBP13.93□□□□□ -0.18
KLHL42-203ENST00000540301 CPS1P31327 1500 aa13.92□□□□□ -0.18
KLHL42-203ENST00000540301 MROH2AA6NES4 1674 aa13.91□□□□□ -0.18
KLHL42-203ENST00000540301 RGS17Q9UGC6 210 aaPredicted RBP13.91□□□□□ -0.18
KLHL42-203ENST00000540301 ZNF142P52746 1687 aaPredicted RBP13.91□□□□□ -0.18
KLHL42-203ENST00000540301 MYO3AQ8NEV4 1616 aa13.9□□□□□ -0.18
KLHL42-203ENST00000540301 CEP170BQ9Y4F5 1589 aaPredicted RBP13.9□□□□□ -0.18
KLHL42-203ENST00000540301 PTPRKQ15262 1439 aa13.9□□□□□ -0.19
KLHL42-203ENST00000540301 CSRNP3Q8WYN3 585 aa13.89□□□□□ -0.19
KLHL42-203ENST00000540301 CDK11AQ9UQ88 783 aaPredicted RBP13.89□□□□□ -0.19
KLHL42-203ENST00000540301 SHANK2Q9UPX8 1470 aa13.88□□□□□ -0.19
KLHL42-203ENST00000540301 ATP1B4Q9UN42 357 aaPredicted RBP13.88□□□□□ -0.19
KLHL42-203ENST00000540301 KIF14Q15058 1648 aa13.87□□□□□ -0.19
KLHL42-203ENST00000540301 KIDINS220Q9ULH0 1771 aa13.85□□□□□ -0.19
KLHL42-203ENST00000540301 ALKQ9UM73 1620 aa13.84□□□□□ -0.19
KLHL42-203ENST00000540301 CLTCQ00610 1675 aaKnown RBP13.83□□□□□ -0.2
KLHL42-203ENST00000540301 ABCC1P33527 1531 aa13.83□□□□□ -0.2
KLHL42-203ENST00000540301 TROQ12816 1431 aaPredicted RBP13.82□□□□□ -0.2
KLHL42-203ENST00000540301 CDC42BPBQ9Y5S2 1711 aa13.82□□□□□ -0.2
KLHL42-203ENST00000540301 CLIP1P30622 1438 aa13.81□□□□□ -0.2
KLHL42-203ENST00000540301 A2ML1A8K2U0 1454 aa13.81□□□□□ -0.2
KLHL42-203ENST00000540301 DNMT1P26358 1616 aaKnown RBP13.81□□□□□ -0.2
KLHL42-203ENST00000540301 ITSN2Q9NZM3 1697 aa13.81□□□□□ -0.2
KLHL42-203ENST00000540301 POTEAQ6S8J7 498 aa13.8□□□□□ -0.2
KLHL42-203ENST00000540301 NEURL4Q96JN8 1562 aa13.79□□□□□ -0.2
KLHL42-203ENST00000540301 POLR1AO95602 1720 aaPredicted RBP13.79□□□□□ -0.2
KLHL42-203ENST00000540301 GGT6Q6P531 493 aa13.79□□□□□ -0.2
KLHL42-203ENST00000540301 VWDEQ8N2E2 1590 aa13.78□□□□□ -0.2
KLHL42-203ENST00000540301 ANKLE2Q86XL3 938 aa13.77□□□□□ -0.21
KLHL42-203ENST00000540301 FMN1Q68DA7 1419 aa13.76□□□□□ -0.21
KLHL42-203ENST00000540301 PREX2Q70Z35 1606 aa13.75□□□□□ -0.21
KLHL42-203ENST00000540301 SPAG9O60271 1321 aaKnown RBP13.75□□□□□ -0.21
KLHL42-203ENST00000540301 SAMD9LQ8IVG5 1584 aa13.75□□□□□ -0.21
KLHL42-203ENST00000540301 A2MP01023 1474 aa13.73□□□□□ -0.21
KLHL42-203ENST00000540301 NPHP4O75161 1426 aaPredicted RBP13.73□□□□□ -0.21
KLHL42-203ENST00000540301 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.72□□□□□ -0.21
KLHL42-203ENST00000540301 ZNF777Q9ULD5 760 aaPredicted RBP13.72□□□□□ -0.21
KLHL42-203ENST00000540301 LRRC7Q96NW7 1537 aa13.72□□□□□ -0.21
KLHL42-203ENST00000540301 RNF17Q9BXT8 1623 aaKnown RBP13.72□□□□□ -0.21
KLHL42-203ENST00000540301 PLXNC1O60486 1568 aa13.71□□□□□ -0.21
KLHL42-203ENST00000540301 THEMISQ8N1K5 641 aaPredicted RBP13.71□□□□□ -0.21
KLHL42-203ENST00000540301 TNRQ92752 1358 aa13.71□□□□□ -0.22
KLHL42-203ENST00000540301 MED14O60244 1454 aa13.7□□□□□ -0.22
KLHL42-203ENST00000540301 HNRNPMP52272 730 aaKnown RBP eCLIP13.7□□□□□ -0.22
KLHL42-203ENST00000540301 SETD1AO15047 1707 aaKnown RBP13.7□□□□□ -0.22
KLHL42-203ENST00000540301 FBXO31Q5XUX0 539 aaPredicted RBP13.69□□□□□ -0.22
KLHL42-203ENST00000540301 ATP7AQ04656 1500 aa13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms