RNA–Protein interactions for RNA: ENST00000539975.5

SNHG1-212, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 5 BASIC

Gene SNHG1, Length 955 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-212ENST00000539975 RASEFQ8IZ41 740 aa10.37□□□□□ -0.75
SNHG1-212ENST00000539975 SP7Q8TDD2 431 aaPredicted RBP10.37□□□□□ -0.75
SNHG1-212ENST00000539975 FAM212AQ96EL1 285 aa10.37□□□□□ -0.75
SNHG1-212ENST00000539975 RIMBP3CA6NJZ7 1639 aa10.36□□□□□ -0.75
SNHG1-212ENST00000539975 RIMBP3BA6NNM3 1639 aa10.36□□□□□ -0.75
SNHG1-212ENST00000539975 RIMBP3Q9UFD9 1639 aa10.36□□□□□ -0.75
SNHG1-212ENST00000539975 PTPRGP23470 1445 aa10.36□□□□□ -0.75
SNHG1-212ENST00000539975 P3H3Q8IVL6 736 aa10.36□□□□□ -0.75
SNHG1-212ENST00000539975 ZNF579Q8NAF0 562 aaKnown RBP10.36□□□□□ -0.75
SNHG1-212ENST00000539975 TNIKQ9UKE5 1360 aa10.36□□□□□ -0.75
SNHG1-212ENST00000539975 SHROOM2Q13796 1616 aa10.34□□□□□ -0.75
SNHG1-212ENST00000539975 TSPYL2Q9H2G4 693 aaPredicted RBP10.34□□□□□ -0.75
SNHG1-212ENST00000539975 UGGT2Q9NYU1 1516 aa10.33□□□□□ -0.76
SNHG1-212ENST00000539975 GSE1Q14687 1217 aa10.33□□□□□ -0.76
SNHG1-212ENST00000539975 CTTNBP2Q8WZ74 1663 aa10.32□□□□□ -0.76
SNHG1-212ENST00000539975 ARAP1Q96P48 1450 aa10.32□□□□□ -0.76
SNHG1-212ENST00000539975 LOC105371045A0A1W2PR82 267 aa10.31□□□□□ -0.76
SNHG1-212ENST00000539975 DCAF8Q5TAQ9 597 aa10.31□□□□□ -0.76
SNHG1-212ENST00000539975 CCDC61Q9Y6R9 512 aa10.31□□□□□ -0.76
SNHG1-212ENST00000539975 DISP1Q96F81 1524 aa10.29□□□□□ -0.76
SNHG1-212ENST00000539975 ATP1B4Q9UN42 357 aaPredicted RBP10.29□□□□□ -0.76
SNHG1-212ENST00000539975 ERCC6L2Q5T890 1561 aa10.29□□□□□ -0.76
SNHG1-212ENST00000539975 EFCAB5A4FU69 1503 aa10.28□□□□□ -0.76
SNHG1-212ENST00000539975 KIAA0556O60303 1618 aa10.27□□□□□ -0.77
SNHG1-212ENST00000539975 CLIP1P30622 1438 aa10.26□□□□□ -0.77
SNHG1-212ENST00000539975 UACAQ9BZF9 1416 aa10.26□□□□□ -0.77
SNHG1-212ENST00000539975 FMN1Q68DA7 1419 aa10.24□□□□□ -0.77
SNHG1-212ENST00000539975 GABBR2O75899 941 aa10.24□□□□□ -0.77
SNHG1-212ENST00000539975 PHF12Q96QT6 1004 aa10.24□□□□□ -0.77
SNHG1-212ENST00000539975 FHOD3Q2V2M9 1422 aa10.24□□□□□ -0.77
SNHG1-212ENST00000539975 SGIP1Q9BQI5 828 aa10.23□□□□□ -0.77
SNHG1-212ENST00000539975 CIZ1Q9ULV3 898 aaPredicted RBP10.23□□□□□ -0.77
SNHG1-212ENST00000539975 CHRM1P11229 460 aaPredicted RBP10.22□□□□□ -0.77
SNHG1-212ENST00000539975 KIF12Q96FN5 646 aa10.22□□□□□ -0.77
SNHG1-212ENST00000539975 CDK11AQ9UQ88 783 aaPredicted RBP10.22□□□□□ -0.77
SNHG1-212ENST00000539975 SAMD9Q5K651 1589 aa10.22□□□□□ -0.77
SNHG1-212ENST00000539975 CEP162Q5TB80 1403 aa10.21□□□□□ -0.78
SNHG1-212ENST00000539975 UHRF1BP1LA0JNW5 1464 aa10.2□□□□□ -0.78
SNHG1-212ENST00000539975 ARID3CA6NKF2 412 aa10.2□□□□□ -0.78
SNHG1-212ENST00000539975 PLB1Q6P1J6 1458 aa10.2□□□□□ -0.78
SNHG1-212ENST00000539975 ARHGAP35Q9NRY4 1499 aa10.2□□□□□ -0.78
SNHG1-212ENST00000539975 ABCC2Q92887 1545 aa10.19□□□□□ -0.78
SNHG1-212ENST00000539975 PLEKHD1A6NEE1 506 aa10.18□□□□□ -0.78
SNHG1-212ENST00000539975 MAP3K13O43283 966 aa10.16□□□□□ -0.78
SNHG1-212ENST00000539975 FAM69CQ0P6D2 419 aa10.16□□□□□ -0.78
SNHG1-212ENST00000539975 KCNH8Q96L42 1107 aa10.16□□□□□ -0.78
SNHG1-212ENST00000539975 PYGBP11216 843 aa10.15□□□□□ -0.78
SNHG1-212ENST00000539975 ADCY10Q96PN6 1610 aa10.15□□□□□ -0.79
SNHG1-212ENST00000539975 ABCA8O94911 1581 aa10.14□□□□□ -0.79
SNHG1-212ENST00000539975 KDM5BQ9UGL1 1544 aa10.14□□□□□ -0.79
SNHG1-212ENST00000539975 PCDHB13Q9Y5F0 798 aa10.14□□□□□ -0.79
SNHG1-212ENST00000539975 RAPGEF6Q8TEU7 1601 aa10.14□□□□□ -0.79
SNHG1-212ENST00000539975 GALR2O43603 387 aaPredicted RBP10.13□□□□□ -0.79
SNHG1-212ENST00000539975 MS4A3Q96HJ5 214 aa10.13□□□□□ -0.79
SNHG1-212ENST00000539975 ASXL2Q76L83 1435 aa10.13□□□□□ -0.79
SNHG1-212ENST00000539975 CASKIN1Q8WXD9 1431 aa10.12□□□□□ -0.79
SNHG1-212ENST00000539975 MAPKBP1O60336 1514 aa10.12□□□□□ -0.79
SNHG1-212ENST00000539975 ATP10BO94823 1461 aa10.11□□□□□ -0.79
SNHG1-212ENST00000539975 ZNF467Q7Z7K2 595 aaPredicted RBP10.11□□□□□ -0.79
SNHG1-212ENST00000539975 HECW1Q76N89 1606 aa10.11□□□□□ -0.79
SNHG1-212ENST00000539975 NUP153P49790 1475 aaKnown RBP10.1□□□□□ -0.79
SNHG1-212ENST00000539975 CCDC18Q5T9S5 1454 aa10.1□□□□□ -0.79
SNHG1-212ENST00000539975 FYCO1Q9BQS8 1478 aa10.1□□□□□ -0.79
SNHG1-212ENST00000539975 WDR7Q9Y4E6 1490 aa10.09□□□□□ -0.79
SNHG1-212ENST00000539975 VPS8Q8N3P4 1428 aa10.08□□□□□ -0.8
SNHG1-212ENST00000539975 EPRSP07814 1512 aaKnown RBP10.08□□□□□ -0.8
SNHG1-212ENST00000539975 DCBLD2Q96PD2 775 aa10.08□□□□□ -0.8
SNHG1-212ENST00000539975 ABCC10Q5T3U5 1492 aa10.08□□□□□ -0.8
SNHG1-212ENST00000539975 ZCCHC11Q5TAX3 1644 aaKnown RBP10.07□□□□□ -0.8
SNHG1-212ENST00000539975 PKD2Q13563 968 aa10.07□□□□□ -0.8
SNHG1-212ENST00000539975 IFNL1Q8IU54 200 aa10.07□□□□□ -0.8
SNHG1-212ENST00000539975 MTUS2Q5JR59 1369 aa10.06□□□□□ -0.8
SNHG1-212ENST00000539975 TIE1P35590 1138 aa10.05□□□□□ -0.8
SNHG1-212ENST00000539975 CDK13Q14004 1512 aaKnown RBP10.04□□□□□ -0.8
SNHG1-212ENST00000539975 ECM2O94769 699 aaPredicted RBP10.04□□□□□ -0.8
SNHG1-212ENST00000539975 PCF11O94913 1555 aaKnown RBP10.04□□□□□ -0.8
SNHG1-212ENST00000539975 CD109Q6YHK3 1445 aa10.03□□□□□ -0.8
SNHG1-212ENST00000539975 TROQ12816 1431 aaPredicted RBP10.02□□□□□ -0.81
SNHG1-212ENST00000539975 PCDHB8Q9UN66 801 aa10.02□□□□□ -0.81
SNHG1-212ENST00000539975 ASTLQ6HA08 431 aaPredicted RBP10.01□□□□□ -0.81
SNHG1-212ENST00000539975 TAOK2Q9UL54 1235 aa10.01□□□□□ -0.81
SNHG1-212ENST00000539975 TEX14Q8IWB6 1497 aa10.01□□□□□ -0.81
SNHG1-212ENST00000539975 DIP2BQ9P265 1576 aa10.01□□□□□ -0.81
SNHG1-212ENST00000539975 EFCAB2Q5VUJ9 269 aa10□□□□□ -0.81
SNHG1-212ENST00000539975 GLI2P10070 1586 aa10□□□□□ -0.81
SNHG1-212ENST00000539975 RIOK3O14730 519 aaKnown RBP9.99□□□□□ -0.81
SNHG1-212ENST00000539975 POTEIP0CG38 1075 aa9.99□□□□□ -0.81
SNHG1-212ENST00000539975 PDAP1Q13442 181 aaKnown RBP9.99□□□□□ -0.81
SNHG1-212ENST00000539975 AMER1Q5JTC6 1135 aaPredicted RBP9.99□□□□□ -0.81
SNHG1-212ENST00000539975 ATMINO43313 823 aaPredicted RBP9.98□□□□□ -0.81
SNHG1-212ENST00000539975 BMP2KQ9NSY1 1161 aaPredicted RBP9.98□□□□□ -0.81
SNHG1-212ENST00000539975 PHLDB1Q86UU1 1377 aa9.98□□□□□ -0.81
SNHG1-212ENST00000539975 CCNB3Q8WWL7 1395 aa9.98□□□□□ -0.81
SNHG1-212ENST00000539975 KIF14Q15058 1648 aa9.97□□□□□ -0.81
SNHG1-212ENST00000539975 CFDP1Q9UEE9 299 aaPredicted RBP9.97□□□□□ -0.81
SNHG1-212ENST00000539975 TRPC6Q9Y210 931 aa9.97□□□□□ -0.81
SNHG1-212ENST00000539975 MAP3K1Q13233 1512 aa9.97□□□□□ -0.81
SNHG1-212ENST00000539975 TTLL13PA6NNM8 815 aa9.96□□□□□ -0.82
SNHG1-212ENST00000539975 TMEM106CQ9BVX2 250 aa9.96□□□□□ -0.82
SNHG1-212ENST00000539975 ZNF777Q9ULD5 760 aaPredicted RBP9.96□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms