RNA–Protein interactions for RNA: ENST00000539960.1

PRPF19-204, Transcript of pre-mRNA processing factor 19, humanhuman

TSL 2

Gene PRPF19, Length 796 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF19-204ENST00000539960 ARHGAP5Q13017 1502 aa21.07■□□□□ 0.96
PRPF19-204ENST00000539960 GPATCH8Q9UKJ3 1502 aaKnown RBP21.07■□□□□ 0.96
PRPF19-204ENST00000539960 LRRC9Q6ZRR7 1453 aa21.07■□□□□ 0.96
PRPF19-204ENST00000539960 CFAP74Q9C0B2 1584 aa21.06■□□□□ 0.96
PRPF19-204ENST00000539960 SCAPERQ9BY12 1400 aa21.06■□□□□ 0.96
PRPF19-204ENST00000539960 CFDP1Q9UEE9 299 aaPredicted RBP21.06■□□□□ 0.96
PRPF19-204ENST00000539960 ZNF777Q9ULD5 760 aaPredicted RBP21.04■□□□□ 0.96
PRPF19-204ENST00000539960 ADGRL1O94910 1474 aa21.04■□□□□ 0.96
PRPF19-204ENST00000539960 NCOA2Q15596 1464 aa21.01■□□□□ 0.95
PRPF19-204ENST00000539960 CDC42BPBQ9Y5S2 1711 aa21.01■□□□□ 0.95
PRPF19-204ENST00000539960 PREX2Q70Z35 1606 aa21■□□□□ 0.95
PRPF19-204ENST00000539960 AFAP1Q8N556 730 aa20.99■□□□□ 0.95
PRPF19-204ENST00000539960 CDC42BPAQ5VT25 1732 aa20.98■□□□□ 0.95
PRPF19-204ENST00000539960 POGZQ7Z3K3 1410 aa20.96■□□□□ 0.95
PRPF19-204ENST00000539960 SUPT6HQ7KZ85 1726 aaKnown RBP20.96■□□□□ 0.95
PRPF19-204ENST00000539960 HNRNPMP52272 730 aaKnown RBP eCLIP20.96■□□□□ 0.95
PRPF19-204ENST00000539960 FRMPD1Q5SYB0 1578 aa20.96■□□□□ 0.95
PRPF19-204ENST00000539960 ZNF644Q9H582 1327 aaPredicted RBP20.95■□□□□ 0.94
PRPF19-204ENST00000539960 ARHGEF12Q9NZN5 1544 aa20.94■□□□□ 0.94
PRPF19-204ENST00000539960 KIAA1107Q9UPP5 1409 aa20.93■□□□□ 0.94
PRPF19-204ENST00000539960 RICTORQ6R327 1708 aa20.92■□□□□ 0.94
PRPF19-204ENST00000539960 TRAPPC8Q9Y2L5 1435 aa20.92■□□□□ 0.94
PRPF19-204ENST00000539960 ZNF518AQ6AHZ1 1483 aa20.91■□□□□ 0.94
PRPF19-204ENST00000539960 MAGI2Q86UL8 1455 aa20.91■□□□□ 0.94
PRPF19-204ENST00000539960 PLEKHH2Q8IVE3 1493 aa20.91■□□□□ 0.94
PRPF19-204ENST00000539960 ABCC1P33527 1531 aa20.9■□□□□ 0.94
PRPF19-204ENST00000539960 SAMD9LQ8IVG5 1584 aa20.89■□□□□ 0.94
PRPF19-204ENST00000539960 MYT1LQ9UL68 1186 aa20.89■□□□□ 0.93
PRPF19-204ENST00000539960 ZMYM4Q5VZL5 1548 aa20.88■□□□□ 0.93
PRPF19-204ENST00000539960 KDM4FA0A1W2PPD8 638 aa20.87■□□□□ 0.93
PRPF19-204ENST00000539960 YEATS2Q9ULM3 1422 aa20.87■□□□□ 0.93
PRPF19-204ENST00000539960 ITSN2Q9NZM3 1697 aa20.86■□□□□ 0.93
PRPF19-204ENST00000539960 MYOM3Q5VTT5 1437 aa20.86■□□□□ 0.93
PRPF19-204ENST00000539960 RSPH4AQ5TD94 716 aa20.85■□□□□ 0.93
PRPF19-204ENST00000539960 SYCP2Q9BX26 1530 aa20.84■□□□□ 0.93
PRPF19-204ENST00000539960 MIA2Q96PC5 1412 aa20.84■□□□□ 0.93
PRPF19-204ENST00000539960 KDM5CP41229 1560 aa20.84■□□□□ 0.93
PRPF19-204ENST00000539960 ZFYVE16Q7Z3T8 1539 aa20.83■□□□□ 0.93
PRPF19-204ENST00000539960 SPAG9O60271 1321 aaKnown RBP20.83■□□□□ 0.93
PRPF19-204ENST00000539960 MBD5Q9P267 1494 aa20.83■□□□□ 0.93
PRPF19-204ENST00000539960 MLH3Q9UHC1 1453 aa20.83■□□□□ 0.93
PRPF19-204ENST00000539960 ARID4BQ4LE39 1312 aaPredicted RBP20.82■□□□□ 0.92
PRPF19-204ENST00000539960 ATP10AO60312 1499 aa20.81■□□□□ 0.92
PRPF19-204ENST00000539960 ARHGEF40Q8TER5 1519 aa20.8■□□□□ 0.92
PRPF19-204ENST00000539960 PPARGC1BQ86YN6 1023 aaKnown RBP20.8■□□□□ 0.92
PRPF19-204ENST00000539960 CAMSAP2Q08AD1 1489 aa20.8■□□□□ 0.92
PRPF19-204ENST00000539960 AEBP2Q6ZN18 517 aaPredicted RBP20.78■□□□□ 0.92
PRPF19-204ENST00000539960 TSPY4P0CV99 314 aa20.76■□□□□ 0.91
PRPF19-204ENST00000539960 TSPY10P0CW01 314 aa20.76■□□□□ 0.91
PRPF19-204ENST00000539960 HECW2Q9P2P5 1572 aa20.76■□□□□ 0.91
PRPF19-204ENST00000539960 C9orf84Q5VXU9 1444 aa20.74■□□□□ 0.91
PRPF19-204ENST00000539960 FGD6Q6ZV73 1430 aa20.74■□□□□ 0.91
PRPF19-204ENST00000539960 CCDC141Q6ZP82 1450 aa20.73■□□□□ 0.91
PRPF19-204ENST00000539960 RTEL1-TNFRSF6BF6WH68 1400 aa20.72■□□□□ 0.91
PRPF19-204ENST00000539960 KIDINS220Q9ULH0 1771 aa20.72■□□□□ 0.91
PRPF19-204ENST00000539960 MLECQ14165 292 aa20.7■□□□□ 0.9
PRPF19-204ENST00000539960 DIP2CQ9Y2E4 1556 aa20.7■□□□□ 0.9
PRPF19-204ENST00000539960 ATP7AQ04656 1500 aa20.69■□□□□ 0.9
PRPF19-204ENST00000539960 ARHGEF5Q12774 1597 aa20.69■□□□□ 0.9
PRPF19-204ENST00000539960 TCOF1Q13428 1488 aaKnown RBP20.68■□□□□ 0.9
PRPF19-204ENST00000539960 ABCA6Q8N139 1617 aa20.67■□□□□ 0.9
PRPF19-204ENST00000539960 PTPN23Q9H3S7 1636 aa20.67■□□□□ 0.9
PRPF19-204ENST00000539960 FAM50AQ14320 339 aaKnown RBP20.66■□□□□ 0.9
PRPF19-204ENST00000539960 REREQ9P2R6 1566 aa20.65■□□□□ 0.9
PRPF19-204ENST00000539960 INO80Q9ULG1 1556 aaPredicted RBP20.65■□□□□ 0.9
PRPF19-204ENST00000539960 SIGLEC1Q9BZZ2 1709 aa20.64■□□□□ 0.9
PRPF19-204ENST00000539960 ABCC5O15440 1437 aa20.64■□□□□ 0.89
PRPF19-204ENST00000539960 A2MP01023 1474 aa20.63■□□□□ 0.89
PRPF19-204ENST00000539960 BCORL1Q5H9F3 1711 aa20.63■□□□□ 0.89
PRPF19-204ENST00000539960 AGLP35573 1532 aa20.63■□□□□ 0.89
PRPF19-204ENST00000539960 DHX29Q7Z478 1369 aaKnown RBP20.62■□□□□ 0.89
PRPF19-204ENST00000539960 ADAMTSL3P82987 1691 aa20.62■□□□□ 0.89
PRPF19-204ENST00000539960 DAPK1P53355 1430 aa20.59■□□□□ 0.89
PRPF19-204ENST00000539960 CHIC2Q9UKJ5 165 aa20.57■□□□□ 0.88
PRPF19-204ENST00000539960 MAST1Q9Y2H9 1570 aa20.57■□□□□ 0.88
PRPF19-204ENST00000539960 RRP7BPQ9NSQ0 103 aa20.56■□□□□ 0.88
PRPF19-204ENST00000539960 KIF3BO15066 747 aa20.55■□□□□ 0.88
PRPF19-204ENST00000539960 GGT6Q6P531 493 aa20.55■□□□□ 0.88
PRPF19-204ENST00000539960 ESF1Q9H501 851 aaKnown RBP20.55■□□□□ 0.88
PRPF19-204ENST00000539960 PTPRMP28827 1452 aa20.55■□□□□ 0.88
PRPF19-204ENST00000539960 ADGBQ8N7X0 1667 aa20.54■□□□□ 0.88
PRPF19-204ENST00000539960 DNMT1P26358 1616 aaKnown RBP20.54■□□□□ 0.88
PRPF19-204ENST00000539960 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP20.54■□□□□ 0.88
PRPF19-204ENST00000539960 SHANK2Q9UPX8 1470 aa20.54■□□□□ 0.88
PRPF19-204ENST00000539960 PLXNC1O60486 1568 aa20.54■□□□□ 0.88
PRPF19-204ENST00000539960 MADDQ8WXG6 1647 aa20.53■□□□□ 0.88
PRPF19-204ENST00000539960 PPP6R1Q9UPN7 881 aa20.53■□□□□ 0.88
PRPF19-204ENST00000539960 ANKRD30AQ9BXX3 1397 aa20.52■□□□□ 0.88
PRPF19-204ENST00000539960 KIF15Q9NS87 1388 aa20.5■□□□□ 0.87
PRPF19-204ENST00000539960 NCOA1Q15788 1441 aa20.5■□□□□ 0.87
PRPF19-204ENST00000539960 PLPPR3Q6T4P5 718 aa20.49■□□□□ 0.87
PRPF19-204ENST00000539960 RRBP1Q9P2E9 1410 aaKnown RBP20.49■□□□□ 0.87
PRPF19-204ENST00000539960 ITGAEP38570 1179 aa20.48■□□□□ 0.87
PRPF19-204ENST00000539960 CEBPAP49715 358 aaPredicted RBP20.48■□□□□ 0.87
PRPF19-204ENST00000539960 PTPRKQ15262 1439 aa20.47■□□□□ 0.87
PRPF19-204ENST00000539960 CROCC2H7BZ55 1655 aa20.46■□□□□ 0.87
PRPF19-204ENST00000539960 RIMS1Q86UR5 1692 aaKnown RBP20.46■□□□□ 0.87
PRPF19-204ENST00000539960 DUOX2Q9NRD8 1548 aa20.46■□□□□ 0.87
PRPF19-204ENST00000539960 CNTLNQ9NXG0 1405 aa20.45■□□□□ 0.86
PRPF19-204ENST00000539960 ADGRL2O95490 1459 aa20.44■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 72.8 ms