RNA–Protein interactions for RNA: ENST00000539952.5

CPSF7-219, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 5

Gene CPSF7, Length 953 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-219ENST00000539952 BCORL1Q5H9F3 1711 aa10.01□□□□□ -0.81
CPSF7-219ENST00000539952 CTTNBP2Q8WZ74 1663 aa10□□□□□ -0.81
CPSF7-219ENST00000539952 FANCAO15360 1455 aa9.98□□□□□ -0.81
CPSF7-219ENST00000539952 MAGI2Q86UL8 1455 aa9.98□□□□□ -0.81
CPSF7-219ENST00000539952 MADDQ8WXG6 1647 aa9.97□□□□□ -0.81
CPSF7-219ENST00000539952 RANGAP1P46060 587 aaPredicted RBP9.96□□□□□ -0.82
CPSF7-219ENST00000539952 EFCAB2Q5VUJ9 269 aa9.96□□□□□ -0.82
CPSF7-219ENST00000539952 YEATS2Q9ULM3 1422 aa9.96□□□□□ -0.82
CPSF7-219ENST00000539952 CEBPAP49715 358 aaPredicted RBP9.95□□□□□ -0.82
CPSF7-219ENST00000539952 SPATA31D1Q6ZQQ2 1576 aa9.94□□□□□ -0.82
CPSF7-219ENST00000539952 SCAPERQ9BY12 1400 aa9.94□□□□□ -0.82
CPSF7-219ENST00000539952 CDK11AQ9UQ88 783 aaPredicted RBP9.94□□□□□ -0.82
CPSF7-219ENST00000539952 RAPGEF6Q8TEU7 1601 aa9.93□□□□□ -0.82
CPSF7-219ENST00000539952 NUP153P49790 1475 aaKnown RBP9.93□□□□□ -0.82
CPSF7-219ENST00000539952 RIMS1Q86UR5 1692 aaKnown RBP9.93□□□□□ -0.82
CPSF7-219ENST00000539952 FRMPD1Q5SYB0 1578 aa9.92□□□□□ -0.82
CPSF7-219ENST00000539952 ATP10AO60312 1499 aa9.92□□□□□ -0.82
CPSF7-219ENST00000539952 PLCH2O75038 1416 aa9.92□□□□□ -0.82
CPSF7-219ENST00000539952 ESF1Q9H501 851 aaKnown RBP9.92□□□□□ -0.82
CPSF7-219ENST00000539952 SETD1BQ9UPS6 1966 aaKnown RBP9.92□□□□□ -0.82
CPSF7-219ENST00000539952 EFCAB5A4FU69 1503 aa9.92□□□□□ -0.82
CPSF7-219ENST00000539952 MYT1LQ9UL68 1186 aa9.91□□□□□ -0.82
CPSF7-219ENST00000539952 ZFYVE16Q7Z3T8 1539 aa9.91□□□□□ -0.82
CPSF7-219ENST00000539952 ARHGEF40Q8TER5 1519 aa9.91□□□□□ -0.82
CPSF7-219ENST00000539952 SAMD9Q5K651 1589 aa9.89□□□□□ -0.83
CPSF7-219ENST00000539952 ZMYM4Q5VZL5 1548 aa9.89□□□□□ -0.83
CPSF7-219ENST00000539952 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP9.89□□□□□ -0.83
CPSF7-219ENST00000539952 ATP1B4Q9UN42 357 aaPredicted RBP9.89□□□□□ -0.83
CPSF7-219ENST00000539952 PTPRTO14522 1441 aa9.89□□□□□ -0.83
CPSF7-219ENST00000539952 CFAP74Q9C0B2 1584 aa9.88□□□□□ -0.83
CPSF7-219ENST00000539952 RICTORQ6R327 1708 aa9.88□□□□□ -0.83
CPSF7-219ENST00000539952 AFAP1Q8N556 730 aa9.88□□□□□ -0.83
CPSF7-219ENST00000539952 C9orf84Q5VXU9 1444 aa9.88□□□□□ -0.83
CPSF7-219ENST00000539952 UHRF1BP1Q6BDS2 1440 aa9.88□□□□□ -0.83
CPSF7-219ENST00000539952 HECW1Q76N89 1606 aa9.86□□□□□ -0.83
CPSF7-219ENST00000539952 ARHGEF12Q9NZN5 1544 aa9.86□□□□□ -0.83
CPSF7-219ENST00000539952 TTC37Q6PGP7 1564 aa9.85□□□□□ -0.83
CPSF7-219ENST00000539952 EEA1Q15075 1411 aa9.85□□□□□ -0.83
CPSF7-219ENST00000539952 TRAPPC8Q9Y2L5 1435 aa9.84□□□□□ -0.83
CPSF7-219ENST00000539952 SLC4A2P04920 1241 aa9.84□□□□□ -0.83
CPSF7-219ENST00000539952 UBTFP17480 764 aaKnown RBP9.82□□□□□ -0.84
CPSF7-219ENST00000539952 ZNF518AQ6AHZ1 1483 aa9.82□□□□□ -0.84
CPSF7-219ENST00000539952 FER1L4A9Z1Z3 1794 aa9.82□□□□□ -0.84
CPSF7-219ENST00000539952 PREX1Q8TCU6 1659 aa9.81□□□□□ -0.84
CPSF7-219ENST00000539952 IQSEC2Q5JU85 1478 aa9.81□□□□□ -0.84
CPSF7-219ENST00000539952 UBAP1LF5GYI3 381 aa9.8□□□□□ -0.84
CPSF7-219ENST00000539952 PKD2Q13563 968 aa9.8□□□□□ -0.84
CPSF7-219ENST00000539952 FMN1Q68DA7 1419 aa9.8□□□□□ -0.84
CPSF7-219ENST00000539952 STRCQ7RTU9 1775 aa9.79□□□□□ -0.84
CPSF7-219ENST00000539952 CNTLNQ9NXG0 1405 aa9.79□□□□□ -0.84
CPSF7-219ENST00000539952 SIGLEC1Q9BZZ2 1709 aa9.79□□□□□ -0.84
CPSF7-219ENST00000539952 MLH3Q9UHC1 1453 aa9.79□□□□□ -0.84
CPSF7-219ENST00000539952 CDK13Q14004 1512 aaKnown RBP9.77□□□□□ -0.84
CPSF7-219ENST00000539952 CLIP1P30622 1438 aa9.77□□□□□ -0.85
CPSF7-219ENST00000539952 DCAF8L1A6NGE4 600 aa9.77□□□□□ -0.85
CPSF7-219ENST00000539952 FOXD4L1Q9NU39 408 aa9.77□□□□□ -0.85
CPSF7-219ENST00000539952 NCKAP5LQ9HCH0 1330 aa9.77□□□□□ -0.85
CPSF7-219ENST00000539952 ZMYM3Q14202 1370 aa9.76□□□□□ -0.85
CPSF7-219ENST00000539952 TROQ12816 1431 aaPredicted RBP9.76□□□□□ -0.85
CPSF7-219ENST00000539952 LTBP4Q8N2S1 1624 aa9.76□□□□□ -0.85
CPSF7-219ENST00000539952 AGLP35573 1532 aa9.76□□□□□ -0.85
CPSF7-219ENST00000539952 NCOA1Q15788 1441 aa9.75□□□□□ -0.85
CPSF7-219ENST00000539952 TOM1O60784 492 aa9.75□□□□□ -0.85
CPSF7-219ENST00000539952 ARHGAP5Q13017 1502 aa9.75□□□□□ -0.85
CPSF7-219ENST00000539952 NPATQ14207 1427 aa9.74□□□□□ -0.85
CPSF7-219ENST00000539952 KDM5CP41229 1560 aa9.74□□□□□ -0.85
CPSF7-219ENST00000539952 REREQ9P2R6 1566 aa9.74□□□□□ -0.85
CPSF7-219ENST00000539952 ZNF335Q9H4Z2 1342 aaPredicted RBP9.74□□□□□ -0.85
CPSF7-219ENST00000539952 ZNF777Q9ULD5 760 aaPredicted RBP9.72□□□□□ -0.85
CPSF7-219ENST00000539952 SPAG9O60271 1321 aaKnown RBP9.72□□□□□ -0.85
CPSF7-219ENST00000539952 MYO5CQ9NQX4 1742 aa9.71□□□□□ -0.85
CPSF7-219ENST00000539952 HNRNPMP52272 730 aaKnown RBP eCLIP9.71□□□□□ -0.86
CPSF7-219ENST00000539952 GGT6Q6P531 493 aa9.71□□□□□ -0.86
CPSF7-219ENST00000539952 DIP2CQ9Y2E4 1556 aa9.7□□□□□ -0.86
CPSF7-219ENST00000539952 C3P01024 1663 aa9.69□□□□□ -0.86
CPSF7-219ENST00000539952 KIF14Q15058 1648 aa9.69□□□□□ -0.86
CPSF7-219ENST00000539952 CAMSAP1Q5T5Y3 1602 aa9.69□□□□□ -0.86
CPSF7-219ENST00000539952 PLA2R1Q13018 1463 aa9.68□□□□□ -0.86
CPSF7-219ENST00000539952 ARHGAP35Q9NRY4 1499 aa9.68□□□□□ -0.86
CPSF7-219ENST00000539952 HSPA1LP34931 641 aa9.68□□□□□ -0.86
CPSF7-219ENST00000539952 PIP4K2BP78356 416 aa9.68□□□□□ -0.86
CPSF7-219ENST00000539952 CFDP1Q9UEE9 299 aaPredicted RBP9.68□□□□□ -0.86
CPSF7-219ENST00000539952 ANKLE2Q86XL3 938 aa9.67□□□□□ -0.86
CPSF7-219ENST00000539952 THEMISQ8N1K5 641 aaPredicted RBP9.66□□□□□ -0.86
CPSF7-219ENST00000539952 PTPRKQ15262 1439 aa9.65□□□□□ -0.86
CPSF7-219ENST00000539952 KIAA1107Q9UPP5 1409 aa9.65□□□□□ -0.86
CPSF7-219ENST00000539952 ABCA6Q8N139 1617 aa9.65□□□□□ -0.86
CPSF7-219ENST00000539952 TCOF1Q13428 1488 aaKnown RBP9.65□□□□□ -0.87
CPSF7-219ENST00000539952 CDC42BPBQ9Y5S2 1711 aa9.64□□□□□ -0.87
CPSF7-219ENST00000539952 CASKIN1Q8WXD9 1431 aa9.64□□□□□ -0.87
CPSF7-219ENST00000539952 KIDINS220Q9ULH0 1771 aa9.63□□□□□ -0.87
CPSF7-219ENST00000539952 ABCC1P33527 1531 aa9.63□□□□□ -0.87
CPSF7-219ENST00000539952 RSPH4AQ5TD94 716 aa9.63□□□□□ -0.87
CPSF7-219ENST00000539952 CCDC18Q5T9S5 1454 aa9.63□□□□□ -0.87
CPSF7-219ENST00000539952 A2MP01023 1474 aa9.62□□□□□ -0.87
CPSF7-219ENST00000539952 PLEKHH2Q8IVE3 1493 aa9.62□□□□□ -0.87
CPSF7-219ENST00000539952 MROH2AA6NES4 1674 aa9.61□□□□□ -0.87
CPSF7-219ENST00000539952 FBXO31Q5XUX0 539 aaPredicted RBP9.61□□□□□ -0.87
CPSF7-219ENST00000539952 SAMD9LQ8IVG5 1584 aa9.61□□□□□ -0.87
CPSF7-219ENST00000539952 GPATCH8Q9UKJ3 1502 aaKnown RBP9.61□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 8.6 ms