RNA–Protein interactions for RNA: ENST00000539416.5

NEK6-212, Transcript of NIMA related kinase 6, humanhuman

TSL 2 BASIC

Gene NEK6, Length 2,582 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK6-212ENST00000539416 RIMBP3Q9UFD9 1639 aa16.72■□□□□ 0.27
NEK6-212ENST00000539416 TROQ12816 1431 aaPredicted RBP16.71■□□□□ 0.26
NEK6-212ENST00000539416 ZCCHC11Q5TAX3 1644 aaKnown RBP16.69■□□□□ 0.26
NEK6-212ENST00000539416 NCOA2Q15596 1464 aa16.68■□□□□ 0.26
NEK6-212ENST00000539416 PLEKHD1A6NEE1 506 aa16.68■□□□□ 0.26
NEK6-212ENST00000539416 MYT1LQ9UL68 1186 aa16.68■□□□□ 0.26
NEK6-212ENST00000539416 PHLDB1Q86UU1 1377 aa16.67■□□□□ 0.26
NEK6-212ENST00000539416 RRBP1Q9P2E9 1410 aaKnown RBP16.67■□□□□ 0.26
NEK6-212ENST00000539416 IRX6P78412 446 aaPredicted RBP16.65■□□□□ 0.26
NEK6-212ENST00000539416 PPP1R15AO75807 674 aaPredicted RBP16.63■□□□□ 0.25
NEK6-212ENST00000539416 MYOM3Q5VTT5 1437 aa16.61■□□□□ 0.25
NEK6-212ENST00000539416 KIF14Q15058 1648 aa16.61■□□□□ 0.25
NEK6-212ENST00000539416 SALL2Q9Y467 1007 aaPredicted RBP16.61■□□□□ 0.25
NEK6-212ENST00000539416 CCNB3Q8WWL7 1395 aa16.6■□□□□ 0.25
NEK6-212ENST00000539416 ABCC10Q5T3U5 1492 aa16.59■□□□□ 0.25
NEK6-212ENST00000539416 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.59■□□□□ 0.252e-6■□□□□ 8.7
NEK6-212ENST00000539416 CCER2I3L3R5 266 aa16.58■□□□□ 0.25
NEK6-212ENST00000539416 FGD6Q6ZV73 1430 aa16.58■□□□□ 0.25
NEK6-212ENST00000539416 NPM1P06748 294 aaKnown RBP eCLIP16.58■□□□□ 0.24
NEK6-212ENST00000539416 MIA2Q96PC5 1412 aa16.57■□□□□ 0.24
NEK6-212ENST00000539416 HIRIP3Q9BW71 556 aaPredicted RBP16.57■□□□□ 0.24
NEK6-212ENST00000539416 CYB5RLQ6IPT4 315 aa16.57■□□□□ 0.24
NEK6-212ENST00000539416 NBR1Q14596 966 aa16.56■□□□□ 0.24
NEK6-212ENST00000539416 WDR7Q9Y4E6 1490 aa16.55■□□□□ 0.24
NEK6-212ENST00000539416 ITSN2Q9NZM3 1697 aa16.55■□□□□ 0.24
NEK6-212ENST00000539416 TCOF1Q13428 1488 aaKnown RBP16.54■□□□□ 0.24
NEK6-212ENST00000539416 GPATCH8Q9UKJ3 1502 aaKnown RBP16.54■□□□□ 0.24
NEK6-212ENST00000539416 ASXL2Q76L83 1435 aa16.53■□□□□ 0.24
NEK6-212ENST00000539416 ANP32CO43423 234 aa16.53■□□□□ 0.24
NEK6-212ENST00000539416 MAPKBP1O60336 1514 aa16.53■□□□□ 0.24
NEK6-212ENST00000539416 PTPN23Q9H3S7 1636 aa16.53■□□□□ 0.24
NEK6-212ENST00000539416 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP16.52■□□□□ 0.24
NEK6-212ENST00000539416 CDC42BPAQ5VT25 1732 aa16.51■□□□□ 0.23
NEK6-212ENST00000539416 PAK3O75914 559 aaPredicted RBP16.51■□□□□ 0.23
NEK6-212ENST00000539416 CCDC136Q96JN2 1154 aa16.51■□□□□ 0.23
NEK6-212ENST00000539416 SIN3AQ96ST3 1273 aa16.49■□□□□ 0.23
NEK6-212ENST00000539416 TTC37Q6PGP7 1564 aa16.49■□□□□ 0.23
NEK6-212ENST00000539416 NOP58Q9Y2X3 529 aaKnown RBP16.48■□□□□ 0.23
NEK6-212ENST00000539416 PREX2Q70Z35 1606 aa16.48■□□□□ 0.23
NEK6-212ENST00000539416 FAM50AQ14320 339 aaKnown RBP16.47■□□□□ 0.23
NEK6-212ENST00000539416 RAB3GAP2Q9H2M9 1393 aa16.47■□□□□ 0.23
NEK6-212ENST00000539416 ERICH6BQ5W0A0 696 aa16.46■□□□□ 0.23
NEK6-212ENST00000539416 CFDP1Q9UEE9 299 aaPredicted RBP16.46■□□□□ 0.23
NEK6-212ENST00000539416 ABCA9Q8IUA7 1624 aa16.46■□□□□ 0.23
NEK6-212ENST00000539416 MYO5CQ9NQX4 1742 aa16.46■□□□□ 0.23
NEK6-212ENST00000539416 CDC42BPBQ9Y5S2 1711 aa16.45■□□□□ 0.22
NEK6-212ENST00000539416 HNRNPUQ00839 825 aaKnown RBP eCLIP16.45■□□□□ 0.22
NEK6-212ENST00000539416 IL27Q8NEV9 243 aa16.44■□□□□ 0.22
NEK6-212ENST00000539416 PLCH2O75038 1416 aa16.44■□□□□ 0.22
NEK6-212ENST00000539416 ARAP3Q8WWN8 1544 aa16.44■□□□□ 0.22
NEK6-212ENST00000539416 PPP4R2Q9NY27 417 aa16.43■□□□□ 0.22
NEK6-212ENST00000539416 CAMSAP2Q08AD1 1489 aa16.42■□□□□ 0.22
NEK6-212ENST00000539416 B4GALNT3Q6L9W6 998 aa16.4■□□□□ 0.22
NEK6-212ENST00000539416 DNAJC5Q9H3Z4 198 aa16.4■□□□□ 0.22
NEK6-212ENST00000539416 RTN4Q9NQC3 1192 aaKnown RBP16.4■□□□□ 0.22
NEK6-212ENST00000539416 ZNF644Q9H582 1327 aaPredicted RBP16.4■□□□□ 0.22
NEK6-212ENST00000539416 GLI2P10070 1586 aa16.39■□□□□ 0.21
NEK6-212ENST00000539416 DNMT1P26358 1616 aaKnown RBP16.39■□□□□ 0.21
NEK6-212ENST00000539416 ARHGAP5Q13017 1502 aa16.39■□□□□ 0.21
NEK6-212ENST00000539416 SAMD9LQ8IVG5 1584 aa16.38■□□□□ 0.21
NEK6-212ENST00000539416 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.37■□□□□ 0.21
NEK6-212ENST00000539416 PTPRKQ15262 1439 aa16.37■□□□□ 0.21
NEK6-212ENST00000539416 PLEKHH2Q8IVE3 1493 aa16.37■□□□□ 0.21
NEK6-212ENST00000539416 EFCAB2Q5VUJ9 269 aa16.36■□□□□ 0.21
NEK6-212ENST00000539416 ZNF777Q9ULD5 760 aaPredicted RBP16.36■□□□□ 0.21
NEK6-212ENST00000539416 ABCC5O15440 1437 aa16.36■□□□□ 0.21
NEK6-212ENST00000539416 DAPK1P53355 1430 aa16.36■□□□□ 0.21
NEK6-212ENST00000539416 ARHGEF5Q12774 1597 aa16.36■□□□□ 0.21
NEK6-212ENST00000539416 KIAA1107Q9UPP5 1409 aa16.35■□□□□ 0.21
NEK6-212ENST00000539416 MBD5Q9P267 1494 aa16.34■□□□□ 0.21
NEK6-212ENST00000539416 RSPH4AQ5TD94 716 aa16.33■□□□□ 0.21
NEK6-212ENST00000539416 CD109Q6YHK3 1445 aa16.33■□□□□ 0.21
NEK6-212ENST00000539416 MAP3K4Q9Y6R4 1608 aa16.33■□□□□ 0.2
NEK6-212ENST00000539416 DIP2BQ9P265 1576 aa16.33■□□□□ 0.2
NEK6-212ENST00000539416 CROCC2H7BZ55 1655 aa16.32■□□□□ 0.2
NEK6-212ENST00000539416 AKNAQ7Z591 1439 aa16.31■□□□□ 0.2
NEK6-212ENST00000539416 ROCK1Q13464 1354 aa16.31■□□□□ 0.2
NEK6-212ENST00000539416 SETD5Q9C0A6 1442 aa16.31■□□□□ 0.2
NEK6-212ENST00000539416 RTL5Q5HYW3 569 aaPredicted RBP16.31■□□□□ 0.2
NEK6-212ENST00000539416 FANCAO15360 1455 aa16.3■□□□□ 0.2
NEK6-212ENST00000539416 SHANK2Q9UPX8 1470 aa16.3■□□□□ 0.2
NEK6-212ENST00000539416 ABCC1P33527 1531 aa16.3■□□□□ 0.2
NEK6-212ENST00000539416 CFAP74Q9C0B2 1584 aa16.3■□□□□ 0.2
NEK6-212ENST00000539416 HNRNPMP52272 730 aaKnown RBP eCLIP16.29■□□□□ 0.2
NEK6-212ENST00000539416 UBE2Q2Q8WVN8 375 aa16.29■□□□□ 0.2
NEK6-212ENST00000539416 SYCP2Q9BX26 1530 aa16.29■□□□□ 0.2
NEK6-212ENST00000539416 HFM1A2PYH4 1435 aa16.29■□□□□ 0.2
NEK6-212ENST00000539416 ARHGEF12Q9NZN5 1544 aa16.28■□□□□ 0.2
NEK6-212ENST00000539416 ADGRL2O95490 1459 aa16.28■□□□□ 0.2
NEK6-212ENST00000539416 CCDC141Q6ZP82 1450 aa16.28■□□□□ 0.2
NEK6-212ENST00000539416 ADGBQ8N7X0 1667 aa16.27■□□□□ 0.2
NEK6-212ENST00000539416 MAST1Q9Y2H9 1570 aa16.27■□□□□ 0.19
NEK6-212ENST00000539416 FAM69CQ0P6D2 419 aa16.26■□□□□ 0.19
NEK6-212ENST00000539416 IPO9Q96P70 1041 aaKnown RBP16.26■□□□□ 0.19
NEK6-212ENST00000539416 NEO1Q92859 1461 aa16.26■□□□□ 0.19
NEK6-212ENST00000539416 NAIPQ13075 1403 aa16.25■□□□□ 0.19
NEK6-212ENST00000539416 GCC2Q8IWJ2 1684 aa16.25■□□□□ 0.19
NEK6-212ENST00000539416 TIMELESSQ9UNS1 1208 aa16.25■□□□□ 0.19
NEK6-212ENST00000539416 CHIC2Q9UKJ5 165 aa16.25■□□□□ 0.19
NEK6-212ENST00000539416 TSPY4P0CV99 314 aa16.24■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 91.5 ms