RNA–Protein interactions for RNA: ENST00000539409.5

FAM60A-206, Transcript of Protein FAM60A, humanhuman

TSL 1 (best) BASIC

Gene FAM60A, Length 2,532 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM60A-206ENST00000539409 PLCH2O75038 1416 aa17.44■□□□□ 0.38
FAM60A-206ENST00000539409 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.44■□□□□ 0.385e-7■■■■■ 29.7
FAM60A-206ENST00000539409 CFDP1Q9UEE9 299 aaPredicted RBP17.44■□□□□ 0.38
FAM60A-206ENST00000539409 ARHGAP5Q13017 1502 aa17.43■□□□□ 0.38
FAM60A-206ENST00000539409 PCGF6Q9BYE7 350 aa17.43■□□□□ 0.38
FAM60A-206ENST00000539409 MAP3K4Q9Y6R4 1608 aa17.42■□□□□ 0.38
FAM60A-206ENST00000539409 CAMSAP2Q08AD1 1489 aa17.42■□□□□ 0.38
FAM60A-206ENST00000539409 FAM50AQ14320 339 aaKnown RBP17.41■□□□□ 0.38
FAM60A-206ENST00000539409 SAMD9LQ8IVG5 1584 aa17.41■□□□□ 0.38
FAM60A-206ENST00000539409 KIF13AQ9H1H9 1805 aa17.4■□□□□ 0.38
FAM60A-206ENST00000539409 ZNF644Q9H582 1327 aaPredicted RBP17.4■□□□□ 0.38
FAM60A-206ENST00000539409 CD109Q6YHK3 1445 aa17.39■□□□□ 0.37
FAM60A-206ENST00000539409 ZNF777Q9ULD5 760 aaPredicted RBP17.37■□□□□ 0.37
FAM60A-206ENST00000539409 FAM69CQ0P6D2 419 aa17.36■□□□□ 0.37
FAM60A-206ENST00000539409 FANCAO15360 1455 aa17.36■□□□□ 0.37
FAM60A-206ENST00000539409 DNMT1P26358 1616 aaKnown RBP17.35■□□□□ 0.37
FAM60A-206ENST00000539409 EFCAB2Q5VUJ9 269 aa17.34■□□□□ 0.37
FAM60A-206ENST00000539409 ABCC1P33527 1531 aa17.34■□□□□ 0.37
FAM60A-206ENST00000539409 CFAP74Q9C0B2 1584 aa17.34■□□□□ 0.37
FAM60A-206ENST00000539409 SYCP2Q9BX26 1530 aa17.33■□□□□ 0.36
FAM60A-206ENST00000539409 PLEKHH2Q8IVE3 1493 aa17.32■□□□□ 0.36
FAM60A-206ENST00000539409 PPRC1Q5VV67 1664 aaKnown RBP17.32■□□□□ 0.36
FAM60A-206ENST00000539409 ARHGEF5Q12774 1597 aa17.32■□□□□ 0.36
FAM60A-206ENST00000539409 MBD5Q9P267 1494 aa17.32■□□□□ 0.36
FAM60A-206ENST00000539409 DAPK1P53355 1430 aa17.31■□□□□ 0.36
FAM60A-206ENST00000539409 KIAA1107Q9UPP5 1409 aa17.31■□□□□ 0.36
FAM60A-206ENST00000539409 CROCC2H7BZ55 1655 aa17.31■□□□□ 0.36
FAM60A-206ENST00000539409 ITGAEP38570 1179 aa17.31■□□□□ 0.36
FAM60A-206ENST00000539409 PTPRKQ15262 1439 aa17.31■□□□□ 0.36
FAM60A-206ENST00000539409 ARHGEF12Q9NZN5 1544 aa17.3■□□□□ 0.36
FAM60A-206ENST00000539409 ABCC5O15440 1437 aa17.3■□□□□ 0.36
FAM60A-206ENST00000539409 TSPOAP1O95153 1857 aa17.29■□□□□ 0.36
FAM60A-206ENST00000539409 NEO1Q92859 1461 aa17.28■□□□□ 0.36
FAM60A-206ENST00000539409 AKNAQ7Z591 1439 aa17.28■□□□□ 0.36
FAM60A-206ENST00000539409 ADGRL1O94910 1474 aa17.28■□□□□ 0.36
FAM60A-206ENST00000539409 CCDC141Q6ZP82 1450 aa17.27■□□□□ 0.36
FAM60A-206ENST00000539409 HNRNPMP52272 730 aaKnown RBP eCLIP17.27■□□□□ 0.363e-8■■■■□ 19.9
FAM60A-206ENST00000539409 SHANK2Q9UPX8 1470 aa17.25■□□□□ 0.35
FAM60A-206ENST00000539409 TEX14Q8IWB6 1497 aa17.25■□□□□ 0.35
FAM60A-206ENST00000539409 TRAPPC8Q9Y2L5 1435 aa17.24■□□□□ 0.35
FAM60A-206ENST00000539409 SCAPERQ9BY12 1400 aa17.23■□□□□ 0.35
FAM60A-206ENST00000539409 ADGBQ8N7X0 1667 aa17.23■□□□□ 0.35
FAM60A-206ENST00000539409 RSPH4AQ5TD94 716 aa17.22■□□□□ 0.35
FAM60A-206ENST00000539409 C9orf84Q5VXU9 1444 aa17.21■□□□□ 0.35
FAM60A-206ENST00000539409 MAST1Q9Y2H9 1570 aa17.21■□□□□ 0.35
FAM60A-206ENST00000539409 ADGRL2O95490 1459 aa17.2■□□□□ 0.34
FAM60A-206ENST00000539409 CHIC2Q9UKJ5 165 aa17.2■□□□□ 0.34
FAM60A-206ENST00000539409 ROCK1Q13464 1354 aa17.2■□□□□ 0.34
FAM60A-206ENST00000539409 POGZQ7Z3K3 1410 aa17.2■□□□□ 0.34
FAM60A-206ENST00000539409 HFM1A2PYH4 1435 aa17.19■□□□□ 0.34
FAM60A-206ENST00000539409 ZNF518AQ6AHZ1 1483 aa17.18■□□□□ 0.34
FAM60A-206ENST00000539409 TRHP20396 242 aaPredicted RBP17.18■□□□□ 0.34
FAM60A-206ENST00000539409 GCC2Q8IWJ2 1684 aa17.18■□□□□ 0.34
FAM60A-206ENST00000539409 KDM5CP41229 1560 aa17.18■□□□□ 0.34
FAM60A-206ENST00000539409 RICTORQ6R327 1708 aa17.17■□□□□ 0.34
FAM60A-206ENST00000539409 TSPY4P0CV99 314 aa17.17■□□□□ 0.34
FAM60A-206ENST00000539409 TSPY10P0CW01 314 aa17.17■□□□□ 0.34
FAM60A-206ENST00000539409 DENND4BO75064 1496 aaPredicted RBP17.17■□□□□ 0.34
FAM60A-206ENST00000539409 ZFYVE16Q7Z3T8 1539 aa17.17■□□□□ 0.34
FAM60A-206ENST00000539409 INO80Q9ULG1 1556 aaPredicted RBP17.16■□□□□ 0.34
FAM60A-206ENST00000539409 NAIPQ13075 1403 aa17.16■□□□□ 0.34
FAM60A-206ENST00000539409 NCOA1Q15788 1441 aa17.16■□□□□ 0.34
FAM60A-206ENST00000539409 AFAP1Q8N556 730 aa17.16■□□□□ 0.34
FAM60A-206ENST00000539409 FRMPD1Q5SYB0 1578 aa17.16■□□□□ 0.34
FAM60A-206ENST00000539409 PLXNC1O60486 1568 aa17.15■□□□□ 0.34
FAM60A-206ENST00000539409 ANKRD30AQ9BXX3 1397 aa17.14■□□□□ 0.33
FAM60A-206ENST00000539409 SETD5Q9C0A6 1442 aa17.14■□□□□ 0.33
FAM60A-206ENST00000539409 RRP7BPQ9NSQ0 103 aa17.14■□□□□ 0.33
FAM60A-206ENST00000539409 ATP7AQ04656 1500 aa17.13■□□□□ 0.33
FAM60A-206ENST00000539409 RTEL1-TNFRSF6BF6WH68 1400 aa17.13■□□□□ 0.33
FAM60A-206ENST00000539409 SPAG9O60271 1321 aaKnown RBP17.12■□□□□ 0.33
FAM60A-206ENST00000539409 HECW2Q9P2P5 1572 aa17.12■□□□□ 0.33
FAM60A-206ENST00000539409 RAB3GAP2Q9H2M9 1393 aa17.11■□□□□ 0.33
FAM60A-206ENST00000539409 RAPGEF3O95398 923 aa17.11■□□□□ 0.33
FAM60A-206ENST00000539409 KIDINS220Q9ULH0 1771 aa17.11■□□□□ 0.33
FAM60A-206ENST00000539409 COL17A1Q9UMD9 1497 aaPredicted RBP17.1■□□□□ 0.33
FAM60A-206ENST00000539409 KDM6BO15054 1643 aa17.1■□□□□ 0.33
FAM60A-206ENST00000539409 KIF15Q9NS87 1388 aa17.1■□□□□ 0.33
FAM60A-206ENST00000539409 ZMYM4Q5VZL5 1548 aa17.1■□□□□ 0.33
FAM60A-206ENST00000539409 MLH3Q9UHC1 1453 aa17.1■□□□□ 0.33
FAM60A-206ENST00000539409 ABCA6Q8N139 1617 aa17.06■□□□□ 0.32
FAM60A-206ENST00000539409 DUOX2Q9NRD8 1548 aa17.06■□□□□ 0.32
FAM60A-206ENST00000539409 ANKRD50Q9ULJ7 1429 aa17.06■□□□□ 0.32
FAM60A-206ENST00000539409 DIP2CQ9Y2E4 1556 aa17.03■□□□□ 0.32
FAM60A-206ENST00000539409 HRCP23327 699 aa17.03■□□□□ 0.32
FAM60A-206ENST00000539409 MAGI2Q86UL8 1455 aa17.02■□□□□ 0.32
FAM60A-206ENST00000539409 ERBINQ96RT1 1412 aa17.02■□□□□ 0.32
FAM60A-206ENST00000539409 MYT1LQ9UL68 1186 aa17.02■□□□□ 0.31
FAM60A-206ENST00000539409 YEATS2Q9ULM3 1422 aa17.01■□□□□ 0.31
FAM60A-206ENST00000539409 ARHGEF40Q8TER5 1519 aa16.98■□□□□ 0.31
FAM60A-206ENST00000539409 A2MP01023 1474 aa16.98■□□□□ 0.31
FAM60A-206ENST00000539409 EIF2AK4Q9P2K8 1649 aaKnown RBP16.98■□□□□ 0.31
FAM60A-206ENST00000539409 DHX29Q7Z478 1369 aaKnown RBP16.97■□□□□ 0.31
FAM60A-206ENST00000539409 UNC13BO14795 1591 aa16.96■□□□□ 0.31
FAM60A-206ENST00000539409 DHX57Q6P158 1386 aaKnown RBP16.95■□□□□ 0.3
FAM60A-206ENST00000539409 DEPDC5O75140 1603 aa16.94■□□□□ 0.3
FAM60A-206ENST00000539409 REREQ9P2R6 1566 aa16.94■□□□□ 0.3
FAM60A-206ENST00000539409 BCORL1Q5H9F3 1711 aa16.94■□□□□ 0.3
FAM60A-206ENST00000539409 ATP10AO60312 1499 aa16.93■□□□□ 0.3
FAM60A-206ENST00000539409 KDM5DQ9BY66 1539 aa16.93■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms