RNA–Protein interactions for RNA: ENST00000538026.5

SPARC-208, Transcript of secreted protein acidic and cysteine rich, humanhuman

TSL 5

Gene SPARC, Length 576 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPARC-208ENST00000538026 CFAP74Q9C0B2 1584 aa13.46□□□□□ -0.25
SPARC-208ENST00000538026 ARHGEF12Q9NZN5 1544 aa13.46□□□□□ -0.25
SPARC-208ENST00000538026 ADGRL1O94910 1474 aa13.46□□□□□ -0.25
SPARC-208ENST00000538026 PREX2Q70Z35 1606 aa13.46□□□□□ -0.26
SPARC-208ENST00000538026 SIGLEC1Q9BZZ2 1709 aa13.44□□□□□ -0.26
SPARC-208ENST00000538026 ARHGAP5Q13017 1502 aa13.44□□□□□ -0.26
SPARC-208ENST00000538026 POGZQ7Z3K3 1410 aa13.44□□□□□ -0.26
SPARC-208ENST00000538026 YEATS2Q9ULM3 1422 aa13.44□□□□□ -0.26
SPARC-208ENST00000538026 ZMYM4Q5VZL5 1548 aa13.44□□□□□ -0.26
SPARC-208ENST00000538026 AFAP1Q8N556 730 aa13.43□□□□□ -0.26
SPARC-208ENST00000538026 KANK4Q5T7N3 995 aaPredicted RBP13.42□□□□□ -0.26
SPARC-208ENST00000538026 MTUS2Q5JR59 1369 aa13.42□□□□□ -0.26
SPARC-208ENST00000538026 TIAM1Q13009 1591 aa13.41□□□□□ -0.26
SPARC-208ENST00000538026 TRAPPC8Q9Y2L5 1435 aa13.41□□□□□ -0.26
SPARC-208ENST00000538026 AEBP2Q6ZN18 517 aaPredicted RBP13.41□□□□□ -0.26
SPARC-208ENST00000538026 SAMD9LQ8IVG5 1584 aa13.41□□□□□ -0.26
SPARC-208ENST00000538026 ABCC1P33527 1531 aa13.4□□□□□ -0.26
SPARC-208ENST00000538026 EHBP1L1Q8N3D4 1523 aa13.39□□□□□ -0.27
SPARC-208ENST00000538026 ARHGEF40Q8TER5 1519 aa13.39□□□□□ -0.27
SPARC-208ENST00000538026 ZNF644Q9H582 1327 aaPredicted RBP13.39□□□□□ -0.27
SPARC-208ENST00000538026 KDM5CP41229 1560 aa13.38□□□□□ -0.27
SPARC-208ENST00000538026 LRRC9Q6ZRR7 1453 aa13.38□□□□□ -0.27
SPARC-208ENST00000538026 ITSN2Q9NZM3 1697 aa13.37□□□□□ -0.27
SPARC-208ENST00000538026 MAGI2Q86UL8 1455 aa13.37□□□□□ -0.27
SPARC-208ENST00000538026 NCOA2Q15596 1464 aa13.36□□□□□ -0.27
SPARC-208ENST00000538026 CCNB3Q8WWL7 1395 aa13.36□□□□□ -0.27
SPARC-208ENST00000538026 MAP3K1Q13233 1512 aa13.36□□□□□ -0.27
SPARC-208ENST00000538026 ZFYVE16Q7Z3T8 1539 aa13.36□□□□□ -0.27
SPARC-208ENST00000538026 HNRNPMP52272 730 aaKnown RBP eCLIP13.36□□□□□ -0.27
SPARC-208ENST00000538026 ZNF777Q9ULD5 760 aaPredicted RBP13.36□□□□□ -0.27
SPARC-208ENST00000538026 ADAMTSL3P82987 1691 aa13.36□□□□□ -0.27
SPARC-208ENST00000538026 ZNF518AQ6AHZ1 1483 aa13.36□□□□□ -0.27
SPARC-208ENST00000538026 CFDP1Q9UEE9 299 aaPredicted RBP13.35□□□□□ -0.27
SPARC-208ENST00000538026 BCORL1Q5H9F3 1711 aa13.34□□□□□ -0.27
SPARC-208ENST00000538026 KIDINS220Q9ULH0 1771 aa13.34□□□□□ -0.27
SPARC-208ENST00000538026 MLH3Q9UHC1 1453 aa13.34□□□□□ -0.27
SPARC-208ENST00000538026 SYCP2Q9BX26 1530 aa13.34□□□□□ -0.27
SPARC-208ENST00000538026 KIAA1107Q9UPP5 1409 aa13.33□□□□□ -0.28
SPARC-208ENST00000538026 ATP10AO60312 1499 aa13.33□□□□□ -0.28
SPARC-208ENST00000538026 MBD5Q9P267 1494 aa13.33□□□□□ -0.28
SPARC-208ENST00000538026 SUPT6HQ7KZ85 1726 aaKnown RBP13.33□□□□□ -0.28
SPARC-208ENST00000538026 DIP2CQ9Y2E4 1556 aa13.32□□□□□ -0.28
SPARC-208ENST00000538026 ABCA6Q8N139 1617 aa13.31□□□□□ -0.28
SPARC-208ENST00000538026 HECW2Q9P2P5 1572 aa13.31□□□□□ -0.28
SPARC-208ENST00000538026 MADDQ8WXG6 1647 aa13.29□□□□□ -0.28
SPARC-208ENST00000538026 ARID4BQ4LE39 1312 aaPredicted RBP13.29□□□□□ -0.28
SPARC-208ENST00000538026 C9orf84Q5VXU9 1444 aa13.28□□□□□ -0.28
SPARC-208ENST00000538026 PTPRMP28827 1452 aa13.27□□□□□ -0.29
SPARC-208ENST00000538026 PLEKHH2Q8IVE3 1493 aa13.27□□□□□ -0.29
SPARC-208ENST00000538026 SPAG9O60271 1321 aaKnown RBP13.26□□□□□ -0.29
SPARC-208ENST00000538026 CAMSAP2Q08AD1 1489 aa13.26□□□□□ -0.29
SPARC-208ENST00000538026 REREQ9P2R6 1566 aa13.26□□□□□ -0.29
SPARC-208ENST00000538026 INO80Q9ULG1 1556 aaPredicted RBP13.25□□□□□ -0.29
SPARC-208ENST00000538026 MLECQ14165 292 aa13.25□□□□□ -0.29
SPARC-208ENST00000538026 RIMS1Q86UR5 1692 aaKnown RBP13.24□□□□□ -0.29
SPARC-208ENST00000538026 ATP7AQ04656 1500 aa13.23□□□□□ -0.29
SPARC-208ENST00000538026 AGLP35573 1532 aa13.23□□□□□ -0.29
SPARC-208ENST00000538026 MYOM3Q5VTT5 1437 aa13.22□□□□□ -0.29
SPARC-208ENST00000538026 MYT1LQ9UL68 1186 aa13.22□□□□□ -0.29
SPARC-208ENST00000538026 PLXNC1O60486 1568 aa13.2□□□□□ -0.3
SPARC-208ENST00000538026 ARHGEF5Q12774 1597 aa13.2□□□□□ -0.3
SPARC-208ENST00000538026 FER1L4A9Z1Z3 1794 aa13.2□□□□□ -0.3
SPARC-208ENST00000538026 MIA2Q96PC5 1412 aa13.2□□□□□ -0.3
SPARC-208ENST00000538026 CCDC141Q6ZP82 1450 aa13.19□□□□□ -0.3
SPARC-208ENST00000538026 RTEL1-TNFRSF6BF6WH68 1400 aa13.19□□□□□ -0.3
SPARC-208ENST00000538026 A2MP01023 1474 aa13.18□□□□□ -0.3
SPARC-208ENST00000538026 CEBPAP49715 358 aaPredicted RBP13.18□□□□□ -0.3
SPARC-208ENST00000538026 APLP2Q06481 763 aa13.18□□□□□ -0.3
SPARC-208ENST00000538026 ADGBQ8N7X0 1667 aa13.18□□□□□ -0.3
SPARC-208ENST00000538026 FGD6Q6ZV73 1430 aa13.16□□□□□ -0.3
SPARC-208ENST00000538026 RSPH4AQ5TD94 716 aa13.16□□□□□ -0.3
SPARC-208ENST00000538026 PTPN23Q9H3S7 1636 aa13.16□□□□□ -0.3
SPARC-208ENST00000538026 ABCC5O15440 1437 aa13.15□□□□□ -0.3
SPARC-208ENST00000538026 PPARGC1BQ86YN6 1023 aaKnown RBP13.15□□□□□ -0.3
SPARC-208ENST00000538026 DHX29Q7Z478 1369 aaKnown RBP13.15□□□□□ -0.3
SPARC-208ENST00000538026 TCOF1Q13428 1488 aaKnown RBP13.15□□□□□ -0.3
SPARC-208ENST00000538026 PLPPR3Q6T4P5 718 aa13.14□□□□□ -0.31
SPARC-208ENST00000538026 MAST1Q9Y2H9 1570 aa13.14□□□□□ -0.31
SPARC-208ENST00000538026 C3P01024 1663 aa13.12□□□□□ -0.31
SPARC-208ENST00000538026 LMTK3Q96Q04 1460 aa13.12□□□□□ -0.31
SPARC-208ENST00000538026 SETD1BQ9UPS6 1966 aaKnown RBP13.12□□□□□ -0.31
SPARC-208ENST00000538026 TSPY4P0CV99 314 aa13.11□□□□□ -0.31
SPARC-208ENST00000538026 TSPY10P0CW01 314 aa13.11□□□□□ -0.31
SPARC-208ENST00000538026 CROCC2H7BZ55 1655 aa13.09□□□□□ -0.31
SPARC-208ENST00000538026 DAPK1P53355 1430 aa13.09□□□□□ -0.31
SPARC-208ENST00000538026 GGT6Q6P531 493 aa13.09□□□□□ -0.31
SPARC-208ENST00000538026 DNMT1P26358 1616 aaKnown RBP13.09□□□□□ -0.31
SPARC-208ENST00000538026 CLTCQ00610 1675 aaKnown RBP13.08□□□□□ -0.31
SPARC-208ENST00000538026 PTPRKQ15262 1439 aa13.08□□□□□ -0.32
SPARC-208ENST00000538026 KIF3BO15066 747 aa13.08□□□□□ -0.32
SPARC-208ENST00000538026 ZMYM3Q14202 1370 aa13.07□□□□□ -0.32
SPARC-208ENST00000538026 HSPA2P54652 639 aa13.07□□□□□ -0.32
SPARC-208ENST00000538026 MROH2AA6NES4 1674 aa13.06□□□□□ -0.32
SPARC-208ENST00000538026 SHANK2Q9UPX8 1470 aa13.06□□□□□ -0.32
SPARC-208ENST00000538026 CNTLNQ9NXG0 1405 aa13.05□□□□□ -0.32
SPARC-208ENST00000538026 RRP7BPQ9NSQ0 103 aa13.05□□□□□ -0.32
SPARC-208ENST00000538026 CHIC2Q9UKJ5 165 aa13.05□□□□□ -0.32
SPARC-208ENST00000538026 MROH1Q8NDA8 1641 aa13.05□□□□□ -0.32
SPARC-208ENST00000538026 PPP6R1Q9UPN7 881 aa13.04□□□□□ -0.32
SPARC-208ENST00000538026 NCOA1Q15788 1441 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms