RNA–Protein interactions for RNA: ENST00000537830.6

SLC12A4-203, Transcript of solute carrier family 12 member 4, humanhuman

TSL 2 BASIC

Gene SLC12A4, Length 3,525 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC12A4-203ENST00000537830 MYT1LQ9UL68 1186 aa16.76■□□□□ 0.27
SLC12A4-203ENST00000537830 PTPN23Q9H3S7 1636 aa16.76■□□□□ 0.27
SLC12A4-203ENST00000537830 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.75■□□□□ 0.271e-8■■□□□ 12
SLC12A4-203ENST00000537830 TIMELESSQ9UNS1 1208 aa16.75■□□□□ 0.27
SLC12A4-203ENST00000537830 L3MBTL2Q969R5 705 aa16.74■□□□□ 0.27
SLC12A4-203ENST00000537830 KIAA0556O60303 1618 aa16.73■□□□□ 0.27
SLC12A4-203ENST00000537830 ANP32CO43423 234 aa16.72■□□□□ 0.27
SLC12A4-203ENST00000537830 LRRIQ1Q96JM4 1722 aa16.71■□□□□ 0.27
SLC12A4-203ENST00000537830 CEP170Q5SW79 1584 aa16.71■□□□□ 0.27
SLC12A4-203ENST00000537830 TROQ12816 1431 aaPredicted RBP16.7■□□□□ 0.26
SLC12A4-203ENST00000537830 KDM2AQ9Y2K7 1162 aa16.7■□□□□ 0.26
SLC12A4-203ENST00000537830 MIA2Q96PC5 1412 aa16.7■□□□□ 0.26
SLC12A4-203ENST00000537830 PKD2Q13563 968 aa16.69■□□□□ 0.26
SLC12A4-203ENST00000537830 ABCC5O15440 1437 aa16.67■□□□□ 0.26
SLC12A4-203ENST00000537830 DAPK1P53355 1430 aa16.67■□□□□ 0.26
SLC12A4-203ENST00000537830 HSPA5P11021 654 aaKnown RBP16.66■□□□□ 0.26
SLC12A4-203ENST00000537830 NUP160Q12769 1436 aa16.65■□□□□ 0.26
SLC12A4-203ENST00000537830 RAPGEF6Q8TEU7 1601 aa16.65■□□□□ 0.26
SLC12A4-203ENST00000537830 EIF4G2P78344 907 aaKnown RBP eCLIP16.65■□□□□ 0.26
SLC12A4-203ENST00000537830 PRKCSHP14314 528 aaPredicted RBP16.62■□□□□ 0.25
SLC12A4-203ENST00000537830 NUP155O75694 1391 aa16.62■□□□□ 0.25
SLC12A4-203ENST00000537830 ARHGEF11O15085 1522 aa16.61■□□□□ 0.25
SLC12A4-203ENST00000537830 RGL3Q3MIN7 710 aa16.61■□□□□ 0.25
SLC12A4-203ENST00000537830 ANKRD30AQ9BXX3 1397 aa16.61■□□□□ 0.25
SLC12A4-203ENST00000537830 ATP10BO94823 1461 aa16.61■□□□□ 0.25
SLC12A4-203ENST00000537830 GPATCH8Q9UKJ3 1502 aaKnown RBP16.6■□□□□ 0.25
SLC12A4-203ENST00000537830 TCOF1Q13428 1488 aaKnown RBP16.58■□□□□ 0.25
SLC12A4-203ENST00000537830 CAMSAP2Q08AD1 1489 aa16.57■□□□□ 0.24
SLC12A4-203ENST00000537830 NBPF8Q3BBV2 869 aa16.56■□□□□ 0.24
SLC12A4-203ENST00000537830 KDM6BO15054 1643 aa16.56■□□□□ 0.24
SLC12A4-203ENST00000537830 BCANQ96GW7 911 aa16.54■□□□□ 0.24
SLC12A4-203ENST00000537830 BCL11AQ9H165 835 aa16.54■□□□□ 0.24
SLC12A4-203ENST00000537830 NCOA1Q15788 1441 aa16.53■□□□□ 0.24
SLC12A4-203ENST00000537830 ANKRD50Q9ULJ7 1429 aa16.53■□□□□ 0.24
SLC12A4-203ENST00000537830 KIF14Q15058 1648 aa16.53■□□□□ 0.24
SLC12A4-203ENST00000537830 AKNAQ7Z591 1439 aa16.52■□□□□ 0.24
SLC12A4-203ENST00000537830 DCAF11Q8TEB1 546 aa16.52■□□□□ 0.23
SLC12A4-203ENST00000537830 ROCK1Q13464 1354 aa16.51■□□□□ 0.23
SLC12A4-203ENST00000537830 KIF15Q9NS87 1388 aa16.5■□□□□ 0.23
SLC12A4-203ENST00000537830 ANKRD30BQ9BXX2 1392 aa16.49■□□□□ 0.23
SLC12A4-203ENST00000537830 SENP3-EIF4A1A0A087X0R7 540 aa16.49■□□□□ 0.23
SLC12A4-203ENST00000537830 C9orf84Q5VXU9 1444 aa16.49■□□□□ 0.23
SLC12A4-203ENST00000537830 WASHC2AQ641Q2 1341 aa16.48■□□□□ 0.23
SLC12A4-203ENST00000537830 C11orf95C9JLR9 678 aaPredicted RBP16.47■□□□□ 0.23
SLC12A4-203ENST00000537830 EFCAB2Q5VUJ9 269 aa16.47■□□□□ 0.23
SLC12A4-203ENST00000537830 FAM9BQ8IZU0 186 aa16.47■□□□□ 0.23
SLC12A4-203ENST00000537830 HNRNPUQ00839 825 aaKnown RBP eCLIP16.46■□□□□ 0.23
SLC12A4-203ENST00000537830 NPM1P06748 294 aaKnown RBP eCLIP16.46■□□□□ 0.23
SLC12A4-203ENST00000537830 AFAP1Q8N556 730 aa16.46■□□□□ 0.23
SLC12A4-203ENST00000537830 CARD11Q9BXL7 1154 aa16.46■□□□□ 0.23
SLC12A4-203ENST00000537830 DENND4BO75064 1496 aaPredicted RBP16.44■□□□□ 0.22
SLC12A4-203ENST00000537830 ERCC6L2Q5T890 1561 aa16.43■□□□□ 0.22
SLC12A4-203ENST00000537830 ARHGAP5Q13017 1502 aa16.41■□□□□ 0.22
SLC12A4-203ENST00000537830 DNMT1P26358 1616 aaKnown RBP16.41■□□□□ 0.22
SLC12A4-203ENST00000537830 RSPH4AQ5TD94 716 aa16.4■□□□□ 0.22
SLC12A4-203ENST00000537830 ABCA8O94911 1581 aa16.4■□□□□ 0.22
SLC12A4-203ENST00000537830 NEFLP07196 543 aa16.4■□□□□ 0.22
SLC12A4-203ENST00000537830 MRS2Q9HD23 443 aa16.39■□□□□ 0.21
SLC12A4-203ENST00000537830 KIAA1107Q9UPP5 1409 aa16.39■□□□□ 0.21
SLC12A4-203ENST00000537830 FKBP8Q14318 412 aa16.39■□□□□ 0.21
SLC12A4-203ENST00000537830 CHD1O14646 1710 aa16.37■□□□□ 0.21
SLC12A4-203ENST00000537830 OSCARQ8IYS5 282 aa16.37■□□□□ 0.21
SLC12A4-203ENST00000537830 CCER2I3L3R5 266 aa16.37■□□□□ 0.21
SLC12A4-203ENST00000537830 SPAG9O60271 1321 aaKnown RBP16.37■□□□□ 0.21
SLC12A4-203ENST00000537830 RPRD2Q5VT52 1461 aaKnown RBP16.36■□□□□ 0.21
SLC12A4-203ENST00000537830 ABCC10Q5T3U5 1492 aa16.36■□□□□ 0.21
SLC12A4-203ENST00000537830 PZPP20742 1482 aa16.35■□□□□ 0.21
SLC12A4-203ENST00000537830 CCDC184Q52MB2 194 aa16.35■□□□□ 0.21
SLC12A4-203ENST00000537830 SENP3Q9H4L4 574 aaPredicted RBP16.35■□□□□ 0.21
SLC12A4-203ENST00000537830 KIF7Q2M1P5 1343 aa16.34■□□□□ 0.21
SLC12A4-203ENST00000537830 ST20-MTHFSA0A0A6YYL1 179 aa16.34■□□□□ 0.21
SLC12A4-203ENST00000537830 SUPT16HQ9Y5B9 1047 aaKnown RBP16.34■□□□□ 0.21
SLC12A4-203ENST00000537830 GCC2Q8IWJ2 1684 aa16.34■□□□□ 0.21
SLC12A4-203ENST00000537830 CHGAP10645 457 aaKnown RBP16.33■□□□□ 0.2
SLC12A4-203ENST00000537830 KIF3BO15066 747 aa16.33■□□□□ 0.2
SLC12A4-203ENST00000537830 IRX6P78412 446 aaPredicted RBP16.32■□□□□ 0.2
SLC12A4-203ENST00000537830 ITSN2Q9NZM3 1697 aa16.32■□□□□ 0.2
SLC12A4-203ENST00000537830 USP47Q96K76 1375 aa16.32■□□□□ 0.2
SLC12A4-203ENST00000537830 CCDC7Q96M83 1385 aa16.32■□□□□ 0.2
SLC12A4-203ENST00000537830 CCDC141Q6ZP82 1450 aa16.31■□□□□ 0.2
SLC12A4-203ENST00000537830 NBPF1Q3BBV0 1214 aa16.29■□□□□ 0.2
SLC12A4-203ENST00000537830 SYCP2Q9BX26 1530 aa16.29■□□□□ 0.2
SLC12A4-203ENST00000537830 PRKRIP1Q9H875 184 aaPredicted RBP16.28■□□□□ 0.2
SLC12A4-203ENST00000537830 CCDC144AA2RUR9 1427 aa16.28■□□□□ 0.2
SLC12A4-203ENST00000537830 PLEKHH2Q8IVE3 1493 aa16.28■□□□□ 0.2
SLC12A4-203ENST00000537830 ROCK2O75116 1388 aaKnown RBP16.28■□□□□ 0.2
SLC12A4-203ENST00000537830 MBD5Q9P267 1494 aa16.27■□□□□ 0.2
SLC12A4-203ENST00000537830 GGT6Q6P531 493 aa16.26■□□□□ 0.19
SLC12A4-203ENST00000537830 SALL2Q9Y467 1007 aaPredicted RBP16.25■□□□□ 0.19
SLC12A4-203ENST00000537830 KDM5BQ9UGL1 1544 aa16.25■□□□□ 0.19
SLC12A4-203ENST00000537830 CYB5RLQ6IPT4 315 aa16.25■□□□□ 0.19
SLC12A4-203ENST00000537830 ADGRL2O95490 1459 aa16.25■□□□□ 0.19
SLC12A4-203ENST00000537830 ABCC2Q92887 1545 aa16.25■□□□□ 0.19
SLC12A4-203ENST00000537830 CDC42BPAQ5VT25 1732 aa16.24■□□□□ 0.19
SLC12A4-203ENST00000537830 TRAPPC8Q9Y2L5 1435 aa16.23■□□□□ 0.19
SLC12A4-203ENST00000537830 TEX14Q8IWB6 1497 aa16.23■□□□□ 0.19
SLC12A4-203ENST00000537830 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP16.23■□□□□ 0.19
SLC12A4-203ENST00000537830 TMC1Q8TDI8 760 aa16.23■□□□□ 0.19
SLC12A4-203ENST00000537830 ERICH6Q7L0X2 663 aa16.22■□□□□ 0.19
SLC12A4-203ENST00000537830 SCAPERQ9BY12 1400 aa16.22■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 64.9 ms