RNA–Protein interactions for RNA: ENST00000536513.5

ABCA4-207, Transcript of ATP binding cassette subfamily A member 4, humanhuman

TSL 1 (best) BASIC

Gene ABCA4, Length 3,740 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA4-207ENST00000536513 TRHP20396 242 aaPredicted RBP11.64□□□□□ -0.55
ABCA4-207ENST00000536513 FYCO1Q9BQS8 1478 aa11.64□□□□□ -0.55
ABCA4-207ENST00000536513 CCDC18Q5T9S5 1454 aa11.62□□□□□ -0.55
ABCA4-207ENST00000536513 GGT6Q6P531 493 aa11.61□□□□□ -0.55
ABCA4-207ENST00000536513 EFCAB5A4FU69 1503 aa11.61□□□□□ -0.55
ABCA4-207ENST00000536513 MYOM3Q5VTT5 1437 aa11.61□□□□□ -0.55
ABCA4-207ENST00000536513 PKD2Q13563 968 aa11.61□□□□□ -0.55
ABCA4-207ENST00000536513 MPHOSPH9Q99550 1183 aa11.61□□□□□ -0.55
ABCA4-207ENST00000536513 MIER1Q8N108 512 aa11.6□□□□□ -0.55
ABCA4-207ENST00000536513 TAOK2Q9UL54 1235 aa11.6□□□□□ -0.55
ABCA4-207ENST00000536513 CEP170Q5SW79 1584 aa11.59□□□□□ -0.55
ABCA4-207ENST00000536513 DISP1Q96F81 1524 aa11.59□□□□□ -0.55
ABCA4-207ENST00000536513 CTTNBP2Q8WZ74 1663 aa11.59□□□□□ -0.55
ABCA4-207ENST00000536513 ARHGEF11O15085 1522 aa11.58□□□□□ -0.56
ABCA4-207ENST00000536513 RRBP1Q9P2E9 1410 aaKnown RBP11.58□□□□□ -0.56
ABCA4-207ENST00000536513 EFCAB2Q5VUJ9 269 aa11.57□□□□□ -0.56
ABCA4-207ENST00000536513 PTPRKQ15262 1439 aa11.57□□□□□ -0.56
ABCA4-207ENST00000536513 BCANQ96GW7 911 aa11.57□□□□□ -0.56
ABCA4-207ENST00000536513 NUP153P49790 1475 aaKnown RBP11.57□□□□□ -0.56
ABCA4-207ENST00000536513 NUP155O75694 1391 aa11.56□□□□□ -0.56
ABCA4-207ENST00000536513 ERCC6L2Q5T890 1561 aa11.55□□□□□ -0.56
ABCA4-207ENST00000536513 NUTM2DQ5VT03 806 aaPredicted RBP11.55□□□□□ -0.56
ABCA4-207ENST00000536513 WDR97A6NE52 1622 aa11.55□□□□□ -0.56
ABCA4-207ENST00000536513 KIF3BO15066 747 aa11.55□□□□□ -0.56
ABCA4-207ENST00000536513 RAPGEF3O95398 923 aa11.54□□□□□ -0.56
ABCA4-207ENST00000536513 FAM69CQ0P6D2 419 aa11.54□□□□□ -0.56
ABCA4-207ENST00000536513 UACAQ9BZF9 1416 aa11.53□□□□□ -0.56
ABCA4-207ENST00000536513 MAGI3Q5TCQ9 1506 aa11.53□□□□□ -0.56
ABCA4-207ENST00000536513 DCAF11Q8TEB1 546 aa11.52□□□□□ -0.57
ABCA4-207ENST00000536513 L3MBTL2Q969R5 705 aa11.52□□□□□ -0.57
ABCA4-207ENST00000536513 ATP10BO94823 1461 aa11.52□□□□□ -0.57
ABCA4-207ENST00000536513 TROQ12816 1431 aaPredicted RBP11.52□□□□□ -0.57
ABCA4-207ENST00000536513 ARID4BQ4LE39 1312 aaPredicted RBP11.51□□□□□ -0.57
ABCA4-207ENST00000536513 NUP160Q12769 1436 aa11.51□□□□□ -0.57
ABCA4-207ENST00000536513 KIAA0556O60303 1618 aa11.51□□□□□ -0.57
ABCA4-207ENST00000536513 BCL11AQ9H165 835 aa11.51□□□□□ -0.57
ABCA4-207ENST00000536513 SPAG9O60271 1321 aaKnown RBP11.5□□□□□ -0.57
ABCA4-207ENST00000536513 NEFLP07196 543 aa11.5□□□□□ -0.57
ABCA4-207ENST00000536513 HECW1Q76N89 1606 aa11.5□□□□□ -0.57
ABCA4-207ENST00000536513 UGGT2Q9NYU1 1516 aa11.48□□□□□ -0.57
ABCA4-207ENST00000536513 ANKRD30AQ9BXX3 1397 aa11.47□□□□□ -0.57
ABCA4-207ENST00000536513 HOMEZQ8IX15 550 aa11.47□□□□□ -0.57
ABCA4-207ENST00000536513 ARHGAP5Q13017 1502 aa11.46□□□□□ -0.57
ABCA4-207ENST00000536513 CHD1O14646 1710 aa11.46□□□□□ -0.57
ABCA4-207ENST00000536513 EHBP1L1Q8N3D4 1523 aa11.46□□□□□ -0.58
ABCA4-207ENST00000536513 STAG3Q9UJ98 1225 aa11.46□□□□□ -0.58
ABCA4-207ENST00000536513 PPP1R15AO75807 674 aaPredicted RBP11.45□□□□□ -0.58
ABCA4-207ENST00000536513 RAPGEF6Q8TEU7 1601 aa11.45□□□□□ -0.58
ABCA4-207ENST00000536513 KIF15Q9NS87 1388 aa11.45□□□□□ -0.58
ABCA4-207ENST00000536513 SAMD9Q5K651 1589 aa11.45□□□□□ -0.58
ABCA4-207ENST00000536513 TPRNQ4KMQ1 711 aa11.45□□□□□ -0.58
ABCA4-207ENST00000536513 SUPT6HQ7KZ85 1726 aaKnown RBP11.45□□□□□ -0.58
ABCA4-207ENST00000536513 NAIPQ13075 1403 aa11.44□□□□□ -0.58
ABCA4-207ENST00000536513 ESF1Q9H501 851 aaKnown RBP11.44□□□□□ -0.58
ABCA4-207ENST00000536513 ABCC5O15440 1437 aa11.43□□□□□ -0.58
ABCA4-207ENST00000536513 DAPK1P53355 1430 aa11.42□□□□□ -0.58
ABCA4-207ENST00000536513 SCAPERQ9BY12 1400 aa11.42□□□□□ -0.58
ABCA4-207ENST00000536513 SAFB2Q14151 953 aaKnown RBP eCLIP11.42□□□□□ -0.58
ABCA4-207ENST00000536513 GPATCH8Q9UKJ3 1502 aaKnown RBP11.42□□□□□ -0.58
ABCA4-207ENST00000536513 PTPN23Q9H3S7 1636 aa11.42□□□□□ -0.58
ABCA4-207ENST00000536513 HSPA5P11021 654 aaKnown RBP11.41□□□□□ -0.58
ABCA4-207ENST00000536513 CARD11Q9BXL7 1154 aa11.41□□□□□ -0.58
ABCA4-207ENST00000536513 ANKRD50Q9ULJ7 1429 aa11.41□□□□□ -0.58
ABCA4-207ENST00000536513 KIF14Q15058 1648 aa11.4□□□□□ -0.58
ABCA4-207ENST00000536513 EIF4G2P78344 907 aaKnown RBP eCLIP11.4□□□□□ -0.58
ABCA4-207ENST00000536513 KLHL34Q8N239 644 aa11.4□□□□□ -0.58
ABCA4-207ENST00000536513 ANP32EQ9BTT0 268 aa11.4□□□□□ -0.58
ABCA4-207ENST00000536513 CAMSAP2Q08AD1 1489 aa11.4□□□□□ -0.58
ABCA4-207ENST00000536513 ANP32CO43423 234 aa11.39□□□□□ -0.59
ABCA4-207ENST00000536513 SALL2Q9Y467 1007 aaPredicted RBP11.39□□□□□ -0.59
ABCA4-207ENST00000536513 C9orf84Q5VXU9 1444 aa11.39□□□□□ -0.59
ABCA4-207ENST00000536513 PLEKHG5O94827 1062 aa11.38□□□□□ -0.59
ABCA4-207ENST00000536513 HFM1A2PYH4 1435 aa11.37□□□□□ -0.59
ABCA4-207ENST00000536513 WASHC2CQ9Y4E1 1318 aa11.37□□□□□ -0.59
ABCA4-207ENST00000536513 NBPF8Q3BBV2 869 aa11.36□□□□□ -0.59
ABCA4-207ENST00000536513 FAM9BQ8IZU0 186 aa11.36□□□□□ -0.59
ABCA4-207ENST00000536513 CLSPNQ9HAW4 1339 aa11.36□□□□□ -0.59
ABCA4-207ENST00000536513 MAP3K1Q13233 1512 aa11.36□□□□□ -0.59
ABCA4-207ENST00000536513 MIA2Q96PC5 1412 aa11.35□□□□□ -0.59
ABCA4-207ENST00000536513 CFAP43Q8NDM7 1665 aa11.35□□□□□ -0.59
ABCA4-207ENST00000536513 ASXL2Q76L83 1435 aa11.34□□□□□ -0.59
ABCA4-207ENST00000536513 STK26Q9P289 416 aa11.34□□□□□ -0.59
ABCA4-207ENST00000536513 LRRIQ1Q96JM4 1722 aa11.34□□□□□ -0.59
ABCA4-207ENST00000536513 NCOA1Q15788 1441 aa11.33□□□□□ -0.6
ABCA4-207ENST00000536513 PODXL2Q9NZ53 605 aa11.33□□□□□ -0.6
ABCA4-207ENST00000536513 TRAPPC8Q9Y2L5 1435 aa11.32□□□□□ -0.6
ABCA4-207ENST00000536513 CD109Q6YHK3 1445 aa11.31□□□□□ -0.6
ABCA4-207ENST00000536513 NBPF1Q3BBV0 1214 aa11.31□□□□□ -0.6
ABCA4-207ENST00000536513 RSPH4AQ5TD94 716 aa11.31□□□□□ -0.6
ABCA4-207ENST00000536513 PLEKHH2Q8IVE3 1493 aa11.3□□□□□ -0.6
ABCA4-207ENST00000536513 ST20-MTHFSA0A0A6YYL1 179 aa11.3□□□□□ -0.6
ABCA4-207ENST00000536513 SYCP2Q9BX26 1530 aa11.3□□□□□ -0.6
ABCA4-207ENST00000536513 KDM6BO15054 1643 aa11.28□□□□□ -0.6
ABCA4-207ENST00000536513 MAPKBP1O60336 1514 aa11.28□□□□□ -0.6
ABCA4-207ENST00000536513 TMC1Q8TDI8 760 aa11.28□□□□□ -0.6
ABCA4-207ENST00000536513 TNNT2P45379 298 aaPredicted RBP11.27□□□□□ -0.6
ABCA4-207ENST00000536513 FANCAO15360 1455 aa11.27□□□□□ -0.6
ABCA4-207ENST00000536513 ABCC2Q92887 1545 aa11.27□□□□□ -0.61
ABCA4-207ENST00000536513 TMEM132EQ6IEE7 984 aa11.26□□□□□ -0.61
ABCA4-207ENST00000536513 AKNAQ7Z591 1439 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms