RNA–Protein interactions for RNA: ENST00000535643.5

LINC01089-204, Transcript of long intergenic non-protein coding RNA 1089, humanhuman

TSL 1 (best)

Gene LINC01089, Length 1,014 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01089-204ENST00000535643 DENND4BO75064 1496 aaPredicted RBP20.18■□□□□ 0.82
LINC01089-204ENST00000535643 FHOD3Q2V2M9 1422 aa20.18■□□□□ 0.82
LINC01089-204ENST00000535643 ZFYVE16Q7Z3T8 1539 aa20.17■□□□□ 0.82
LINC01089-204ENST00000535643 RICTORQ6R327 1708 aa20.17■□□□□ 0.82
LINC01089-204ENST00000535643 IGF1RP08069 1367 aa20.17■□□□□ 0.82
LINC01089-204ENST00000535643 CAMSAP1Q5T5Y3 1602 aa20.16■□□□□ 0.82
LINC01089-204ENST00000535643 ALKQ9UM73 1620 aa20.13■□□□□ 0.81
LINC01089-204ENST00000535643 EFCAB5A4FU69 1503 aa20.13■□□□□ 0.81
LINC01089-204ENST00000535643 ZMYM4Q5VZL5 1548 aa20.12■□□□□ 0.81
LINC01089-204ENST00000535643 TRAPPC8Q9Y2L5 1435 aa20.08■□□□□ 0.8
LINC01089-204ENST00000535643 PTPRKQ15262 1439 aa20.07■□□□□ 0.8
LINC01089-204ENST00000535643 MAGI2Q86UL8 1455 aa20.05■□□□□ 0.8
LINC01089-204ENST00000535643 ABCA8O94911 1581 aa20.05■□□□□ 0.8
LINC01089-204ENST00000535643 UGGT2Q9NYU1 1516 aa20.05■□□□□ 0.8
LINC01089-204ENST00000535643 PKD2Q13563 968 aa20.02■□□□□ 0.8
LINC01089-204ENST00000535643 PPP6R1Q9UPN7 881 aa20.02■□□□□ 0.8
LINC01089-204ENST00000535643 C3P01024 1663 aa20.02■□□□□ 0.8
LINC01089-204ENST00000535643 CPS1P31327 1500 aa20.02■□□□□ 0.79
LINC01089-204ENST00000535643 ARID3CA6NKF2 412 aa19.99■□□□□ 0.79
LINC01089-204ENST00000535643 ATP10AO60312 1499 aa19.98■□□□□ 0.79
LINC01089-204ENST00000535643 C9orf84Q5VXU9 1444 aa19.97■□□□□ 0.79
LINC01089-204ENST00000535643 HECW1Q76N89 1606 aa19.97■□□□□ 0.79
LINC01089-204ENST00000535643 TCOF1Q13428 1488 aaKnown RBP19.96■□□□□ 0.79
LINC01089-204ENST00000535643 CARMIL1Q5VZK9 1371 aa19.95■□□□□ 0.79
LINC01089-204ENST00000535643 PLA2R1Q13018 1463 aa19.94■□□□□ 0.78
LINC01089-204ENST00000535643 ATP10BO94823 1461 aa19.91■□□□□ 0.78
LINC01089-204ENST00000535643 SHANK2Q9UPX8 1470 aa19.91■□□□□ 0.78
LINC01089-204ENST00000535643 RAPGEF2Q9Y4G8 1499 aa19.9■□□□□ 0.78
LINC01089-204ENST00000535643 TRIM52Q96A61 297 aa19.87■□□□□ 0.77
LINC01089-204ENST00000535643 KIF27Q86VH2 1401 aa19.85■□□□□ 0.77
LINC01089-204ENST00000535643 RBM33Q96EV2 1170 aaKnown RBP19.81■□□□□ 0.76
LINC01089-204ENST00000535643 SETBP1Q9Y6X0 1596 aa19.8■□□□□ 0.76
LINC01089-204ENST00000535643 ESF1Q9H501 851 aaKnown RBP19.8■□□□□ 0.76
LINC01089-204ENST00000535643 CFAP74Q9C0B2 1584 aa19.79■□□□□ 0.76
LINC01089-204ENST00000535643 NPATQ14207 1427 aa19.79■□□□□ 0.76
LINC01089-204ENST00000535643 LRRC7Q96NW7 1537 aa19.76■□□□□ 0.75
LINC01089-204ENST00000535643 ZRANB1Q9UGI0 708 aa19.75■□□□□ 0.75
LINC01089-204ENST00000535643 SCAPERQ9BY12 1400 aa19.73■□□□□ 0.75
LINC01089-204ENST00000535643 ZNF142P52746 1687 aaPredicted RBP19.72■□□□□ 0.75
LINC01089-204ENST00000535643 VWDEQ8N2E2 1590 aa19.71■□□□□ 0.75
LINC01089-204ENST00000535643 CEP170BQ9Y4F5 1589 aaPredicted RBP19.7■□□□□ 0.74
LINC01089-204ENST00000535643 RNF17Q9BXT8 1623 aaKnown RBP19.7■□□□□ 0.74
LINC01089-204ENST00000535643 SUPT6HQ7KZ85 1726 aaKnown RBP19.7■□□□□ 0.74
LINC01089-204ENST00000535643 CNTLNQ9NXG0 1405 aa19.69■□□□□ 0.74
LINC01089-204ENST00000535643 GOLGA3Q08378 1498 aa19.67■□□□□ 0.74
LINC01089-204ENST00000535643 AGLP35573 1532 aa19.67■□□□□ 0.74
LINC01089-204ENST00000535643 MYO3AQ8NEV4 1616 aa19.67■□□□□ 0.74
LINC01089-204ENST00000535643 NEURL4Q96JN8 1562 aa19.65■□□□□ 0.74
LINC01089-204ENST00000535643 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.64■□□□□ 0.73
LINC01089-204ENST00000535643 HNRNPUL2Q1KMD3 747 aaKnown RBP19.64■□□□□ 0.73
LINC01089-204ENST00000535643 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP19.62■□□□□ 0.732e-6■■■■□ 24.9
LINC01089-204ENST00000535643 ZNF772Q68DY9 489 aaPredicted RBP19.62■□□□□ 0.73
LINC01089-204ENST00000535643 ZMYM3Q14202 1370 aa19.61■□□□□ 0.73
LINC01089-204ENST00000535643 RXRBP28702 533 aa19.6■□□□□ 0.73
LINC01089-204ENST00000535643 REREQ9P2R6 1566 aa19.6■□□□□ 0.73
LINC01089-204ENST00000535643 DIP2CQ9Y2E4 1556 aa19.58■□□□□ 0.73
LINC01089-204ENST00000535643 CDK12Q9NYV4 1490 aaPredicted RBP19.58■□□□□ 0.72
LINC01089-204ENST00000535643 FAM135BQ49AJ0 1406 aa19.58■□□□□ 0.72
LINC01089-204ENST00000535643 POLR1AO95602 1720 aaPredicted RBP19.55■□□□□ 0.72
LINC01089-204ENST00000535643 MROH2AA6NES4 1674 aa19.53■□□□□ 0.72
LINC01089-204ENST00000535643 STRCP1A6NGW2 1772 aa19.52■□□□□ 0.71
LINC01089-204ENST00000535643 MYT1LQ9UL68 1186 aa19.51■□□□□ 0.71
LINC01089-204ENST00000535643 DNMT1P26358 1616 aaKnown RBP19.51■□□□□ 0.71
LINC01089-204ENST00000535643 SYNMO15061 1565 aa19.5■□□□□ 0.71
LINC01089-204ENST00000535643 YY1P25490 414 aa19.49■□□□□ 0.71
LINC01089-204ENST00000535643 FAM9AQ8IZU1 332 aaPredicted RBP19.49■□□□□ 0.71
LINC01089-204ENST00000535643 AFAP1Q8N556 730 aa19.49■□□□□ 0.71
LINC01089-204ENST00000535643 A2ML1A8K2U0 1454 aa19.48■□□□□ 0.71
LINC01089-204ENST00000535643 ZNF518AQ6AHZ1 1483 aa19.48■□□□□ 0.71
LINC01089-204ENST00000535643 KDM5CP41229 1560 aa19.47■□□□□ 0.71
LINC01089-204ENST00000535643 LRP6O75581 1613 aa19.47■□□□□ 0.71
LINC01089-204ENST00000535643 ABCA6Q8N139 1617 aa19.47■□□□□ 0.71
LINC01089-204ENST00000535643 PLEKHD1A6NEE1 506 aa19.46■□□□□ 0.71
LINC01089-204ENST00000535643 JCADQ9P266 1359 aa19.45■□□□□ 0.7
LINC01089-204ENST00000535643 LRP5O75197 1615 aa19.44■□□□□ 0.7
LINC01089-204ENST00000535643 RGS12O14924 1447 aa19.44■□□□□ 0.7
LINC01089-204ENST00000535643 PLCH2O75038 1416 aa19.44■□□□□ 0.7
LINC01089-204ENST00000535643 MEX3CQ5U5Q3 659 aaKnown RBP19.44■□□□□ 0.7
LINC01089-204ENST00000535643 NPHP4O75161 1426 aaPredicted RBP19.43■□□□□ 0.7
LINC01089-204ENST00000535643 CDK13Q14004 1512 aaKnown RBP19.42■□□□□ 0.7
LINC01089-204ENST00000535643 NUTM2BA6NNL0 878 aaPredicted RBP19.42■□□□□ 0.7
LINC01089-204ENST00000535643 NUTM2EB1AL46 878 aaPredicted RBP19.42■□□□□ 0.7
LINC01089-204ENST00000535643 MSH5O43196 834 aa19.42■□□□□ 0.7
LINC01089-204ENST00000535643 NUTM2DQ5VT03 806 aaPredicted RBP19.42■□□□□ 0.7
LINC01089-204ENST00000535643 ANKLE2Q86XL3 938 aa19.42■□□□□ 0.7
LINC01089-204ENST00000535643 NUTM2AQ8IVF1 878 aaPredicted RBP19.42■□□□□ 0.7
LINC01089-204ENST00000535643 P3H3Q8IVL6 736 aa19.42■□□□□ 0.7
LINC01089-204ENST00000535643 RAPGEF6Q8TEU7 1601 aa19.42■□□□□ 0.7
LINC01089-204ENST00000535643 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP19.41■□□□□ 0.73e-6■■□□□ 12.8
LINC01089-204ENST00000535643 MED14O60244 1454 aa19.4■□□□□ 0.7
LINC01089-204ENST00000535643 NUP153P49790 1475 aaKnown RBP19.4■□□□□ 0.7
LINC01089-204ENST00000535643 SENP3-EIF4A1A0A087X0R7 540 aa19.39■□□□□ 0.69
LINC01089-204ENST00000535643 ROBO1Q9Y6N7 1651 aa19.39■□□□□ 0.69
LINC01089-204ENST00000535643 CTTNBP2Q8WZ74 1663 aa19.38■□□□□ 0.69
LINC01089-204ENST00000535643 EFCAB2Q5VUJ9 269 aa19.36■□□□□ 0.69
LINC01089-204ENST00000535643 MLH3Q9UHC1 1453 aa19.35■□□□□ 0.69
LINC01089-204ENST00000535643 ATAD2Q6PL18 1390 aa19.34■□□□□ 0.69
LINC01089-204ENST00000535643 CLTCQ00610 1675 aaKnown RBP19.33■□□□□ 0.69
LINC01089-204ENST00000535643 SPATA31A6Q5VVP1 1343 aa19.32■□□□□ 0.68
LINC01089-204ENST00000535643 IQGAP1P46940 1657 aa19.3■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 9.3 ms