RNA–Protein interactions for RNA: ENST00000535565.6

RBFOX1-206, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 2 BASIC

Gene RBFOX1, Length 1,599 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-206ENST00000535565 ITGAEP38570 1179 aa34.58■■■■□ 3.13
RBFOX1-206ENST00000535565 ARHGAP5Q13017 1502 aa34.56■■■■□ 3.12
RBFOX1-206ENST00000535565 PLCH2O75038 1416 aa34.54■■■■□ 3.12
RBFOX1-206ENST00000535565 ZNF777Q9ULD5 760 aaPredicted RBP34.53■■■■□ 3.12
RBFOX1-206ENST00000535565 ARAP3Q8WWN8 1544 aa34.52■■■■□ 3.12
RBFOX1-206ENST00000535565 DNMT1P26358 1616 aaKnown RBP34.5■■■■□ 3.11
RBFOX1-206ENST00000535565 ZNF644Q9H582 1327 aaPredicted RBP34.49■■■■□ 3.11
RBFOX1-206ENST00000535565 DNAJC5Q9H3Z4 198 aa34.49■■■■□ 3.11
RBFOX1-206ENST00000535565 SAMD9LQ8IVG5 1584 aa34.48■■■■□ 3.11
RBFOX1-206ENST00000535565 DAPK1P53355 1430 aa34.42■■■■□ 3.1
RBFOX1-206ENST00000535565 PLEKHH2Q8IVE3 1493 aa34.41■■■■□ 3.1
RBFOX1-206ENST00000535565 EFCAB2Q5VUJ9 269 aa34.41■■■■□ 3.1
RBFOX1-206ENST00000535565 GLI2P10070 1586 aa34.4■■■■□ 3.1
RBFOX1-206ENST00000535565 CROCC2H7BZ55 1655 aa34.4■■■■□ 3.1
RBFOX1-206ENST00000535565 PTPRKQ15262 1439 aa34.38■■■■□ 3.09
RBFOX1-206ENST00000535565 ARHGEF5Q12774 1597 aa34.38■■■■□ 3.09
RBFOX1-206ENST00000535565 DIP2BQ9P265 1576 aa34.37■■■■□ 3.09
RBFOX1-206ENST00000535565 ABCC5O15440 1437 aa34.37■■■■□ 3.09
RBFOX1-206ENST00000535565 CD109Q6YHK3 1445 aa34.37■■■■□ 3.09
RBFOX1-206ENST00000535565 CFAP74Q9C0B2 1584 aa34.35■■■■□ 3.09
RBFOX1-206ENST00000535565 FANCAO15360 1455 aa34.34■■■■□ 3.09
RBFOX1-206ENST00000535565 MAP3K4Q9Y6R4 1608 aa34.34■■■■□ 3.09
RBFOX1-206ENST00000535565 SYCP2Q9BX26 1530 aa34.33■■■■□ 3.09
RBFOX1-206ENST00000535565 KIAA1107Q9UPP5 1409 aa34.33■■■■□ 3.09
RBFOX1-206ENST00000535565 ABCC1P33527 1531 aa34.31■■■■□ 3.08
RBFOX1-206ENST00000535565 ADGBQ8N7X0 1667 aa34.31■■■■□ 3.08
RBFOX1-206ENST00000535565 MBD5Q9P267 1494 aa34.3■■■■□ 3.08
RBFOX1-206ENST00000535565 RSPH4AQ5TD94 716 aa34.28■■■■□ 3.08
RBFOX1-206ENST00000535565 CCDC141Q6ZP82 1450 aa34.28■■■■□ 3.08
RBFOX1-206ENST00000535565 HNRNPMP52272 730 aaKnown RBP eCLIP34.28■■■■□ 3.08
RBFOX1-206ENST00000535565 SHANK2Q9UPX8 1470 aa34.27■■■■□ 3.08
RBFOX1-206ENST00000535565 AKNAQ7Z591 1439 aa34.27■■■■□ 3.08
RBFOX1-206ENST00000535565 SETD5Q9C0A6 1442 aa34.27■■■■□ 3.08
RBFOX1-206ENST00000535565 HFM1A2PYH4 1435 aa34.25■■■■□ 3.07
RBFOX1-206ENST00000535565 CHIC2Q9UKJ5 165 aa34.25■■■■□ 3.07
RBFOX1-206ENST00000535565 GCC2Q8IWJ2 1684 aa34.25■■■■□ 3.07
RBFOX1-206ENST00000535565 ROCK1Q13464 1354 aa34.24■■■■□ 3.07
RBFOX1-206ENST00000535565 FAM69CQ0P6D2 419 aa34.23■■■■□ 3.07
RBFOX1-206ENST00000535565 KIF13AQ9H1H9 1805 aa34.22■■■■□ 3.07
RBFOX1-206ENST00000535565 TSPY4P0CV99 314 aa34.2■■■■□ 3.07
RBFOX1-206ENST00000535565 TSPY10P0CW01 314 aa34.2■■■■□ 3.07
RBFOX1-206ENST00000535565 ARHGEF12Q9NZN5 1544 aa34.2■■■■□ 3.07
RBFOX1-206ENST00000535565 ADGRL1O94910 1474 aa34.2■■■■□ 3.06
RBFOX1-206ENST00000535565 ADGRL2O95490 1459 aa34.19■■■■□ 3.06
RBFOX1-206ENST00000535565 C9orf84Q5VXU9 1444 aa34.19■■■■□ 3.06
RBFOX1-206ENST00000535565 RAB3GAP2Q9H2M9 1393 aa34.18■■■■□ 3.06
RBFOX1-206ENST00000535565 NAIPQ13075 1403 aa34.17■■■■□ 3.06
RBFOX1-206ENST00000535565 NEO1Q92859 1461 aa34.17■■■■□ 3.06
RBFOX1-206ENST00000535565 MAST1Q9Y2H9 1570 aa34.16■■■■□ 3.06
RBFOX1-206ENST00000535565 ANKRD30AQ9BXX3 1397 aa34.14■■■■□ 3.06
RBFOX1-206ENST00000535565 RRP7BPQ9NSQ0 103 aa34.14■■■■□ 3.06
RBFOX1-206ENST00000535565 TSPOAP1O95153 1857 aa34.12■■■■□ 3.05
RBFOX1-206ENST00000535565 NCOA1Q15788 1441 aa34.12■■■■□ 3.05
RBFOX1-206ENST00000535565 SCAPERQ9BY12 1400 aa34.11■■■■□ 3.05
RBFOX1-206ENST00000535565 HRCP23327 699 aa34.1■■■■□ 3.05
RBFOX1-206ENST00000535565 TRAPPC8Q9Y2L5 1435 aa34.09■■■■□ 3.05
RBFOX1-206ENST00000535565 PPRC1Q5VV67 1664 aaKnown RBP34.08■■■■□ 3.05
RBFOX1-206ENST00000535565 TEX14Q8IWB6 1497 aa34.07■■■■□ 3.04
RBFOX1-206ENST00000535565 CCER1Q8TC90 406 aaPredicted RBP34.04■■■■□ 3.04
RBFOX1-206ENST00000535565 PLXNC1O60486 1568 aa34.04■■■■□ 3.04
RBFOX1-206ENST00000535565 ZNF518AQ6AHZ1 1483 aa34.02■■■■□ 3.04
RBFOX1-206ENST00000535565 RTEL1-TNFRSF6BF6WH68 1400 aa33.98■■■■□ 3.03
RBFOX1-206ENST00000535565 SPAG9O60271 1321 aaKnown RBP33.98■■■■□ 3.03
RBFOX1-206ENST00000535565 POGZQ7Z3K3 1410 aa33.98■■■■□ 3.03
RBFOX1-206ENST00000535565 AFAP1Q8N556 730 aa33.98■■■■□ 3.03
RBFOX1-206ENST00000535565 KIF15Q9NS87 1388 aa33.97■■■■□ 3.03
RBFOX1-206ENST00000535565 ZFYVE16Q7Z3T8 1539 aa33.97■■■■□ 3.03
RBFOX1-206ENST00000535565 KDM6BO15054 1643 aa33.97■■■■□ 3.03
RBFOX1-206ENST00000535565 INO80Q9ULG1 1556 aaPredicted RBP33.97■■■■□ 3.03
RBFOX1-206ENST00000535565 ACIN1Q9UKV3 1341 aaKnown RBP33.96■■■■□ 3.03
RBFOX1-206ENST00000535565 DENND4BO75064 1496 aaPredicted RBP33.95■■■■□ 3.02
RBFOX1-206ENST00000535565 ATP7AQ04656 1500 aa33.94■■■■□ 3.02
RBFOX1-206ENST00000535565 KDM5CP41229 1560 aa33.94■■■■□ 3.02
RBFOX1-206ENST00000535565 ANKRD50Q9ULJ7 1429 aa33.91■■■■□ 3.02
RBFOX1-206ENST00000535565 RICTORQ6R327 1708 aa33.91■■■■□ 3.02
RBFOX1-206ENST00000535565 DHX57Q6P158 1386 aaKnown RBP33.9■■■■□ 3.02
RBFOX1-206ENST00000535565 DUOX2Q9NRD8 1548 aa33.88■■■■□ 3.01
RBFOX1-206ENST00000535565 HECW2Q9P2P5 1572 aa33.87■■■■□ 3.01
RBFOX1-206ENST00000535565 KIDINS220Q9ULH0 1771 aa33.86■■■■□ 3.01
RBFOX1-206ENST00000535565 MYT1LQ9UL68 1186 aa33.85■■■■□ 3.01
RBFOX1-206ENST00000535565 MLH3Q9UHC1 1453 aa33.83■■■■□ 3.01
RBFOX1-206ENST00000535565 TRHP20396 242 aaPredicted RBP33.8■■■■□ 3
RBFOX1-206ENST00000535565 ERBINQ96RT1 1412 aa33.8■■■■□ 3
RBFOX1-206ENST00000535565 RAPGEF3O95398 923 aa33.79■■■■□ 3
RBFOX1-206ENST00000535565 TRIM52Q96A61 297 aa33.79■■■■□ 3
RBFOX1-206ENST00000535565 FRMPD1Q5SYB0 1578 aa33.79■■■■□ 3
RBFOX1-206ENST00000535565 CLSPNQ9HAW4 1339 aa33.77■■■■□ 3
RBFOX1-206ENST00000535565 ZEB1P37275 1124 aaPredicted RBP33.75■■■□□ 2.99
RBFOX1-206ENST00000535565 ZMYM4Q5VZL5 1548 aa33.75■■■□□ 2.99
RBFOX1-206ENST00000535565 ABCA6Q8N139 1617 aa33.7■■■□□ 2.98
RBFOX1-206ENST00000535565 UNC13BO14795 1591 aa33.69■■■□□ 2.98
RBFOX1-206ENST00000535565 EIF2AK4Q9P2K8 1649 aaKnown RBP33.69■■■□□ 2.98
RBFOX1-206ENST00000535565 DHX29Q7Z478 1369 aaKnown RBP33.66■■■□□ 2.98
RBFOX1-206ENST00000535565 MAGI2Q86UL8 1455 aa33.66■■■□□ 2.98
RBFOX1-206ENST00000535565 KDM5DQ9BY66 1539 aa33.66■■■□□ 2.98
RBFOX1-206ENST00000535565 DIP2CQ9Y2E4 1556 aa33.64■■■□□ 2.98
RBFOX1-206ENST00000535565 A2MP01023 1474 aa33.64■■■□□ 2.98
RBFOX1-206ENST00000535565 MPHOSPH9Q99550 1183 aa33.61■■■□□ 2.97
RBFOX1-206ENST00000535565 NUP155O75694 1391 aa33.61■■■□□ 2.97
RBFOX1-206ENST00000535565 PZPP20742 1482 aa33.6■■■□□ 2.97
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms