RNA–Protein interactions for RNA: ENST00000535120.1

MRE11-205, Transcript of MRE11 homolog, double strand break repair nuclease, humanhuman

TSL 2

Gene MRE11, Length 234 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRE11-205ENST00000535120 CFAP74Q9C0B2 1584 aa12.01□□□□□ -0.49
MRE11-205ENST00000535120 EFCAB2Q5VUJ9 269 aa12.01□□□□□ -0.49
MRE11-205ENST00000535120 EFCAB5A4FU69 1503 aa12.01□□□□□ -0.49
MRE11-205ENST00000535120 HECW1Q76N89 1606 aa12□□□□□ -0.49
MRE11-205ENST00000535120 AFAP1Q8N556 730 aa11.99□□□□□ -0.49
MRE11-205ENST00000535120 CDK11AQ9UQ88 783 aaPredicted RBP11.99□□□□□ -0.49
MRE11-205ENST00000535120 PLCH2O75038 1416 aa11.99□□□□□ -0.49
MRE11-205ENST00000535120 ZMYM4Q5VZL5 1548 aa11.98□□□□□ -0.49
MRE11-205ENST00000535120 MAGI2Q86UL8 1455 aa11.98□□□□□ -0.49
MRE11-205ENST00000535120 SIGLEC1Q9BZZ2 1709 aa11.97□□□□□ -0.49
MRE11-205ENST00000535120 ATP10AO60312 1499 aa11.97□□□□□ -0.49
MRE11-205ENST00000535120 C9orf84Q5VXU9 1444 aa11.96□□□□□ -0.49
MRE11-205ENST00000535120 ESF1Q9H501 851 aaKnown RBP11.96□□□□□ -0.49
MRE11-205ENST00000535120 FER1L4A9Z1Z3 1794 aa11.95□□□□□ -0.5
MRE11-205ENST00000535120 ARHGAP5Q13017 1502 aa11.94□□□□□ -0.5
MRE11-205ENST00000535120 DISP3Q9P2K9 1392 aa11.93□□□□□ -0.5
MRE11-205ENST00000535120 FMN1Q68DA7 1419 aa11.93□□□□□ -0.5
MRE11-205ENST00000535120 DMRT2Q9Y5R5 561 aa11.92□□□□□ -0.5
MRE11-205ENST00000535120 ARHGEF12Q9NZN5 1544 aa11.91□□□□□ -0.5
MRE11-205ENST00000535120 ZNF777Q9ULD5 760 aaPredicted RBP11.91□□□□□ -0.5
MRE11-205ENST00000535120 CLIP1P30622 1438 aa11.91□□□□□ -0.5
MRE11-205ENST00000535120 UHRF1BP1Q6BDS2 1440 aa11.91□□□□□ -0.5
MRE11-205ENST00000535120 ZNF518AQ6AHZ1 1483 aa11.9□□□□□ -0.5
MRE11-205ENST00000535120 KIF14Q15058 1648 aa11.9□□□□□ -0.5
MRE11-205ENST00000535120 TROQ12816 1431 aaPredicted RBP11.9□□□□□ -0.5
MRE11-205ENST00000535120 ARHGAP35Q9NRY4 1499 aa11.89□□□□□ -0.51
MRE11-205ENST00000535120 MYO5CQ9NQX4 1742 aa11.89□□□□□ -0.51
MRE11-205ENST00000535120 ILDR2Q71H61 639 aa11.88□□□□□ -0.51
MRE11-205ENST00000535120 PREX1Q8TCU6 1659 aa11.86□□□□□ -0.51
MRE11-205ENST00000535120 TRAPPC8Q9Y2L5 1435 aa11.86□□□□□ -0.51
MRE11-205ENST00000535120 DIP2CQ9Y2E4 1556 aa11.84□□□□□ -0.51
MRE11-205ENST00000535120 CHIC1Q5VXU3 224 aa11.83□□□□□ -0.52
MRE11-205ENST00000535120 HNRNPMP52272 730 aaKnown RBP eCLIP11.82□□□□□ -0.52
MRE11-205ENST00000535120 KDM5CP41229 1560 aa11.82□□□□□ -0.52
MRE11-205ENST00000535120 STRCQ7RTU9 1775 aa11.82□□□□□ -0.52
MRE11-205ENST00000535120 ABCA6Q8N139 1617 aa11.81□□□□□ -0.52
MRE11-205ENST00000535120 MLH3Q9UHC1 1453 aa11.81□□□□□ -0.52
MRE11-205ENST00000535120 SPAG9O60271 1321 aaKnown RBP11.81□□□□□ -0.52
MRE11-205ENST00000535120 NCKAP5LQ9HCH0 1330 aa11.81□□□□□ -0.52
MRE11-205ENST00000535120 SOCS7O14512 581 aa11.8□□□□□ -0.52
MRE11-205ENST00000535120 PTPRTO14522 1441 aa11.79□□□□□ -0.52
MRE11-205ENST00000535120 GGT6Q6P531 493 aa11.79□□□□□ -0.52
MRE11-205ENST00000535120 C3P01024 1663 aa11.78□□□□□ -0.52
MRE11-205ENST00000535120 ABCC1P33527 1531 aa11.78□□□□□ -0.52
MRE11-205ENST00000535120 UBAP1LF5GYI3 381 aa11.78□□□□□ -0.52
MRE11-205ENST00000535120 CASKIN1Q8WXD9 1431 aa11.77□□□□□ -0.52
MRE11-205ENST00000535120 CDC42BPBQ9Y5S2 1711 aa11.77□□□□□ -0.52
MRE11-205ENST00000535120 CFDP1Q9UEE9 299 aaPredicted RBP11.77□□□□□ -0.53
MRE11-205ENST00000535120 ZNF335Q9H4Z2 1342 aaPredicted RBP11.77□□□□□ -0.53
MRE11-205ENST00000535120 ZMYM3Q14202 1370 aa11.77□□□□□ -0.53
MRE11-205ENST00000535120 LRRIQ1Q96JM4 1722 aa11.77□□□□□ -0.53
MRE11-205ENST00000535120 NCOA1Q15788 1441 aa11.77□□□□□ -0.53
MRE11-205ENST00000535120 CNTLNQ9NXG0 1405 aa11.77□□□□□ -0.53
MRE11-205ENST00000535120 CCDC18Q5T9S5 1454 aa11.76□□□□□ -0.53
MRE11-205ENST00000535120 SCAF1Q9H7N4 1312 aaKnown RBP11.76□□□□□ -0.53
MRE11-205ENST00000535120 AGLP35573 1532 aa11.76□□□□□ -0.53
MRE11-205ENST00000535120 PREX2Q70Z35 1606 aa11.75□□□□□ -0.53
MRE11-205ENST00000535120 SETD1BQ9UPS6 1966 aaKnown RBP11.75□□□□□ -0.53
MRE11-205ENST00000535120 REREQ9P2R6 1566 aa11.75□□□□□ -0.53
MRE11-205ENST00000535120 SYCP2Q9BX26 1530 aa11.74□□□□□ -0.53
MRE11-205ENST00000535120 SPATA31D1Q6ZQQ2 1576 aa11.74□□□□□ -0.53
MRE11-205ENST00000535120 CAMSAP1Q5T5Y3 1602 aa11.74□□□□□ -0.53
MRE11-205ENST00000535120 ITSN2Q9NZM3 1697 aa11.74□□□□□ -0.53
MRE11-205ENST00000535120 SAMD9LQ8IVG5 1584 aa11.73□□□□□ -0.53
MRE11-205ENST00000535120 CCNB3Q8WWL7 1395 aa11.73□□□□□ -0.53
MRE11-205ENST00000535120 KIDINS220Q9ULH0 1771 aa11.73□□□□□ -0.53
MRE11-205ENST00000535120 LTBP4Q8N2S1 1624 aa11.72□□□□□ -0.53
MRE11-205ENST00000535120 GPATCH8Q9UKJ3 1502 aaKnown RBP11.71□□□□□ -0.53
MRE11-205ENST00000535120 MTUS2Q5JR59 1369 aa11.71□□□□□ -0.53
MRE11-205ENST00000535120 ZNF644Q9H582 1327 aaPredicted RBP11.71□□□□□ -0.53
MRE11-205ENST00000535120 PIP4K2BP78356 416 aa11.71□□□□□ -0.53
MRE11-205ENST00000535120 SUPT6HQ7KZ85 1726 aaKnown RBP11.71□□□□□ -0.54
MRE11-205ENST00000535120 NPATQ14207 1427 aa11.7□□□□□ -0.54
MRE11-205ENST00000535120 CDC42BPAQ5VT25 1732 aa11.7□□□□□ -0.54
MRE11-205ENST00000535120 PKD2Q13563 968 aa11.7□□□□□ -0.54
MRE11-205ENST00000535120 PPP6R1Q9UPN7 881 aa11.7□□□□□ -0.54
MRE11-205ENST00000535120 A2MP01023 1474 aa11.7□□□□□ -0.54
MRE11-205ENST00000535120 FYCO1Q9BQS8 1478 aa11.7□□□□□ -0.54
MRE11-205ENST00000535120 SENP3Q9H4L4 574 aaPredicted RBP11.69□□□□□ -0.54
MRE11-205ENST00000535120 ATP7AQ04656 1500 aa11.69□□□□□ -0.54
MRE11-205ENST00000535120 CLTCQ00610 1675 aaKnown RBP11.68□□□□□ -0.54
MRE11-205ENST00000535120 PTPRKQ15262 1439 aa11.67□□□□□ -0.54
MRE11-205ENST00000535120 PLEKHH2Q8IVE3 1493 aa11.66□□□□□ -0.54
MRE11-205ENST00000535120 KIF3BO15066 747 aa11.66□□□□□ -0.54
MRE11-205ENST00000535120 FBXO31Q5XUX0 539 aaPredicted RBP11.66□□□□□ -0.54
MRE11-205ENST00000535120 KIAA1107Q9UPP5 1409 aa11.66□□□□□ -0.54
MRE11-205ENST00000535120 IQSEC2Q5JU85 1478 aa11.65□□□□□ -0.54
MRE11-205ENST00000535120 CEP170BQ9Y4F5 1589 aaPredicted RBP11.64□□□□□ -0.55
MRE11-205ENST00000535120 HSPA1LP34931 641 aa11.64□□□□□ -0.55
MRE11-205ENST00000535120 MYO3AQ8NEV4 1616 aa11.64□□□□□ -0.55
MRE11-205ENST00000535120 MROH2AA6NES4 1674 aa11.63□□□□□ -0.55
MRE11-205ENST00000535120 TNRQ92752 1358 aa11.62□□□□□ -0.55
MRE11-205ENST00000535120 PLA2R1Q13018 1463 aa11.62□□□□□ -0.55
MRE11-205ENST00000535120 INO80Q9ULG1 1556 aaPredicted RBP11.62□□□□□ -0.55
MRE11-205ENST00000535120 WASHC2CQ9Y4E1 1318 aa11.61□□□□□ -0.55
MRE11-205ENST00000535120 TOM1O60784 492 aa11.61□□□□□ -0.55
MRE11-205ENST00000535120 TCOF1Q13428 1488 aaKnown RBP11.61□□□□□ -0.55
MRE11-205ENST00000535120 PLXNC1O60486 1568 aa11.61□□□□□ -0.55
MRE11-205ENST00000535120 A2ML1A8K2U0 1454 aa11.6□□□□□ -0.55
MRE11-205ENST00000535120 DHX29Q7Z478 1369 aaKnown RBP11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms