RNA–Protein interactions for RNA: ENST00000535094.6

MCF2L-232, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene MCF2L, Length 3,752 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-232ENST00000535094 MAP3K1Q13233 1512 aa21.2■□□□□ 0.98
MCF2L-232ENST00000535094 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.18■□□□□ 0.987e-7■■□□□ 14.2
MCF2L-232ENST00000535094 CC2D1BQ5T0F9 858 aaKnown RBP21.17■□□□□ 0.98
MCF2L-232ENST00000535094 PLIN1O60240 522 aa21.17■□□□□ 0.98
MCF2L-232ENST00000535094 DCAF11Q8TEB1 546 aa21.17■□□□□ 0.98
MCF2L-232ENST00000535094 RCAN3Q9UKA8 241 aa21.13■□□□□ 0.97
MCF2L-232ENST00000535094 EIF5BO60841 1220 aaKnown RBP21.12■□□□□ 0.97
MCF2L-232ENST00000535094 SKAP1Q86WV1 359 aa21.12■□□□□ 0.97
MCF2L-232ENST00000535094 ST20-MTHFSA0A0A6YYL1 179 aa21.12■□□□□ 0.97
MCF2L-232ENST00000535094 HMGXB3Q12766 1538 aa21.11■□□□□ 0.97
MCF2L-232ENST00000535094 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP21.11■□□□□ 0.972e-7■■□□□ 13.3
MCF2L-232ENST00000535094 SLC4A3P48751 1232 aa21.1■□□□□ 0.97
MCF2L-232ENST00000535094 NESP48681 1621 aa21.1■□□□□ 0.97
MCF2L-232ENST00000535094 USP47Q96K76 1375 aa21.09■□□□□ 0.97
MCF2L-232ENST00000535094 ZBTB4Q9P1Z0 1013 aaPredicted RBP21.09■□□□□ 0.97
MCF2L-232ENST00000535094 PTPN23Q9H3S7 1636 aa21.09■□□□□ 0.97
MCF2L-232ENST00000535094 IL27Q8NEV9 243 aa21.07■□□□□ 0.96
MCF2L-232ENST00000535094 PDE4AP27815 886 aa21.06■□□□□ 0.96
MCF2L-232ENST00000535094 POLA1P09884 1462 aaPredicted RBP21.06■□□□□ 0.96
MCF2L-232ENST00000535094 TSPY4P0CV99 314 aa21.05■□□□□ 0.96
MCF2L-232ENST00000535094 TSPY10P0CW01 314 aa21.05■□□□□ 0.96
MCF2L-232ENST00000535094 RGS3P49796 1198 aa21.05■□□□□ 0.96
MCF2L-232ENST00000535094 ARXQ96QS3 562 aa21.04■□□□□ 0.96
MCF2L-232ENST00000535094 CDCA7LQ96GN5 454 aa21.04■□□□□ 0.96
MCF2L-232ENST00000535094 ANO8Q9HCE9 1232 aaPredicted RBP21.04■□□□□ 0.96
MCF2L-232ENST00000535094 RRP1P56182 461 aaKnown RBP21.03■□□□□ 0.96
MCF2L-232ENST00000535094 PNISRQ8TF01 805 aaKnown RBP21.02■□□□□ 0.96
MCF2L-232ENST00000535094 NCOA1Q15788 1441 aa21.01■□□□□ 0.95
MCF2L-232ENST00000535094 EFCAB5A4FU69 1503 aa20.98■□□□□ 0.95
MCF2L-232ENST00000535094 TCERG1O14776 1098 aaKnown RBP20.98■□□□□ 0.95
MCF2L-232ENST00000535094 NUP155O75694 1391 aa20.98■□□□□ 0.95
MCF2L-232ENST00000535094 GAPVD1Q14C86 1478 aa20.97■□□□□ 0.95
MCF2L-232ENST00000535094 TOPBP1Q92547 1522 aa20.96■□□□□ 0.95
MCF2L-232ENST00000535094 SMG6Q86US8 1419 aaKnown RBP20.95■□□□□ 0.94
MCF2L-232ENST00000535094 CHMP7Q8WUX9 453 aaPredicted RBP20.95■□□□□ 0.94
MCF2L-232ENST00000535094 ANKRD30BQ9BXX2 1392 aa20.95■□□□□ 0.94
MCF2L-232ENST00000535094 CFAP43Q8NDM7 1665 aa20.94■□□□□ 0.94
MCF2L-232ENST00000535094 CDK13Q14004 1512 aaKnown RBP20.94■□□□□ 0.94
MCF2L-232ENST00000535094 CANXP27824 592 aaKnown RBP20.93■□□□□ 0.94
MCF2L-232ENST00000535094 WDR43Q15061 677 aaKnown RBP eCLIP20.93■□□□□ 0.94
MCF2L-232ENST00000535094 CRBNQ96SW2 442 aa20.93■□□□□ 0.94
MCF2L-232ENST00000535094 PPM1GO15355 546 aaPredicted RBP20.93■□□□□ 0.94
MCF2L-232ENST00000535094 DNAJC5BQ9UF47 199 aa20.92■□□□□ 0.94
MCF2L-232ENST00000535094 MYBBP1AQ9BQG0 1328 aaKnown RBP20.91■□□□□ 0.94
MCF2L-232ENST00000535094 ROCK2O75116 1388 aaKnown RBP20.9■□□□□ 0.94
MCF2L-232ENST00000535094 PLEKHD1A6NEE1 506 aa20.9■□□□□ 0.94
MCF2L-232ENST00000535094 RALBP1Q15311 655 aa20.89■□□□□ 0.94
MCF2L-232ENST00000535094 NLRP13Q86W25 1043 aa20.89■□□□□ 0.94
MCF2L-232ENST00000535094 KIF15Q9NS87 1388 aa20.88■□□□□ 0.93
MCF2L-232ENST00000535094 ABCA10Q8WWZ4 1543 aa20.88■□□□□ 0.93
MCF2L-232ENST00000535094 PDS5BQ9NTI5 1447 aa20.88■□□□□ 0.93
MCF2L-232ENST00000535094 SUPT6HQ7KZ85 1726 aaKnown RBP20.88■□□□□ 0.93
MCF2L-232ENST00000535094 SNAPC4Q5SXM2 1469 aa20.87■□□□□ 0.93
MCF2L-232ENST00000535094 HNRNPMP52272 730 aaKnown RBP eCLIP20.87■□□□□ 0.93
MCF2L-232ENST00000535094 KTN1Q86UP2 1357 aaKnown RBP20.87■□□□□ 0.93
MCF2L-232ENST00000535094 DDRGK1Q96HY6 314 aa20.87■□□□□ 0.93
MCF2L-232ENST00000535094 EHBP1L1Q8N3D4 1523 aa20.87■□□□□ 0.93
MCF2L-232ENST00000535094 PANK3Q9H999 370 aa20.82■□□□□ 0.92
MCF2L-232ENST00000535094 BACH2Q9BYV9 841 aa20.82■□□□□ 0.92
MCF2L-232ENST00000535094 BRPF3Q9ULD4 1205 aa20.82■□□□□ 0.92
MCF2L-232ENST00000535094 NEUROD2Q15784 382 aa20.82■□□□□ 0.92
MCF2L-232ENST00000535094 NBPF1Q3BBV0 1214 aa20.81■□□□□ 0.92
MCF2L-232ENST00000535094 RPRD2Q5VT52 1461 aaKnown RBP20.81■□□□□ 0.92
MCF2L-232ENST00000535094 DAPK1P53355 1430 aa20.8■□□□□ 0.92
MCF2L-232ENST00000535094 CCDC146Q8IYE0 955 aa20.8■□□□□ 0.92
MCF2L-232ENST00000535094 KNSTRNQ9Y448 316 aa20.8■□□□□ 0.92
MCF2L-232ENST00000535094 ANKRD30AQ9BXX3 1397 aa20.8■□□□□ 0.92
MCF2L-232ENST00000535094 KDM6BO15054 1643 aa20.79■□□□□ 0.92
MCF2L-232ENST00000535094 EPRSP07814 1512 aaKnown RBP20.79■□□□□ 0.92
MCF2L-232ENST00000535094 GRIN2BQ13224 1484 aa20.79■□□□□ 0.92
MCF2L-232ENST00000535094 DNMBPQ6XZF7 1577 aa20.78■□□□□ 0.92
MCF2L-232ENST00000535094 C20orf194Q5TEA3 1177 aa20.77■□□□□ 0.92
MCF2L-232ENST00000535094 GOLGA6L2Q8N9W4 650 aaPredicted RBP20.77■□□□□ 0.92
MCF2L-232ENST00000535094 ABCC5O15440 1437 aa20.77■□□□□ 0.91
MCF2L-232ENST00000535094 DHX29Q7Z478 1369 aaKnown RBP20.76■□□□□ 0.91
MCF2L-232ENST00000535094 SENP3Q9H4L4 574 aaPredicted RBP20.76■□□□□ 0.91
MCF2L-232ENST00000535094 PRG4Q92954 1404 aaPredicted RBP20.74■□□□□ 0.91
MCF2L-232ENST00000535094 UGGT2Q9NYU1 1516 aa20.74■□□□□ 0.91
MCF2L-232ENST00000535094 TNNT2P45379 298 aaPredicted RBP20.74■□□□□ 0.91
MCF2L-232ENST00000535094 PDE3BQ13370 1112 aa20.74■□□□□ 0.91
MCF2L-232ENST00000535094 MIA2Q96PC5 1412 aa20.74■□□□□ 0.91
MCF2L-232ENST00000535094 FRAT1Q92837 279 aaPredicted RBP20.73■□□□□ 0.91
MCF2L-232ENST00000535094 MAGI3Q5TCQ9 1506 aa20.73■□□□□ 0.91
MCF2L-232ENST00000535094 NFKBIBQ15653 356 aa20.73■□□□□ 0.91
MCF2L-232ENST00000535094 SLKQ9H2G2 1235 aaPredicted RBP20.72■□□□□ 0.91
MCF2L-232ENST00000535094 KDM5BQ9UGL1 1544 aa20.72■□□□□ 0.91
MCF2L-232ENST00000535094 PRDM2Q13029 1718 aa20.72■□□□□ 0.91
MCF2L-232ENST00000535094 TMF1P82094 1093 aa20.72■□□□□ 0.91
MCF2L-232ENST00000535094 SPRYD3Q8NCJ5 442 aa20.72■□□□□ 0.91
MCF2L-232ENST00000535094 BRD4O60885 1362 aaPredicted RBP20.72■□□□□ 0.91
MCF2L-232ENST00000535094 GSE1Q14687 1217 aa20.71■□□□□ 0.91
MCF2L-232ENST00000535094 ADAMTS8Q9UP79 889 aa20.71■□□□□ 0.91
MCF2L-232ENST00000535094 DENND4BO75064 1496 aaPredicted RBP20.71■□□□□ 0.91
MCF2L-232ENST00000535094 MS4A1P11836 297 aa20.7■□□□□ 0.9
MCF2L-232ENST00000535094 CC2D2AQ9P2K1 1620 aa20.7■□□□□ 0.9
MCF2L-232ENST00000535094 ANKRD50Q9ULJ7 1429 aa20.7■□□□□ 0.9
MCF2L-232ENST00000535094 KIAA1107Q9UPP5 1409 aa20.69■□□□□ 0.9
MCF2L-232ENST00000535094 THOC2Q8NI27 1593 aaKnown RBP20.69■□□□□ 0.9
MCF2L-232ENST00000535094 USP35Q9P2H5 1018 aa20.69■□□□□ 0.9
MCF2L-232ENST00000535094 URB2Q14146 1524 aaKnown RBP20.67■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms