RNA–Protein interactions for RNA: ENST00000534400.5

BRPF3-211, Transcript of bromodomain and PHD finger containing 3, humanhuman

TSL 5 BASIC

Gene BRPF3, Length 4,254 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRPF3-211ENST00000534400 RAPGEF3O95398 923 aa13.9□□□□□ -0.18
BRPF3-211ENST00000534400 LMOD2Q6P5Q4 547 aa13.89□□□□□ -0.19
BRPF3-211ENST00000534400 SCAPERQ9BY12 1400 aa13.87□□□□□ -0.19
BRPF3-211ENST00000534400 WDR97A6NE52 1622 aa13.87□□□□□ -0.19
BRPF3-211ENST00000534400 TEX14Q8IWB6 1497 aa13.86□□□□□ -0.19
BRPF3-211ENST00000534400 FYCO1Q9BQS8 1478 aa13.86□□□□□ -0.19
BRPF3-211ENST00000534400 PLEKHG5O94827 1062 aa13.84□□□□□ -0.19
BRPF3-211ENST00000534400 TMC1Q8TDI8 760 aa13.84□□□□□ -0.19
BRPF3-211ENST00000534400 PHLDB1Q86UU1 1377 aa13.83□□□□□ -0.2
BRPF3-211ENST00000534400 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.82□□□□□ -0.2
BRPF3-211ENST00000534400 DCAF11Q8TEB1 546 aa13.82□□□□□ -0.2
BRPF3-211ENST00000534400 NUP160Q12769 1436 aa13.82□□□□□ -0.2
BRPF3-211ENST00000534400 SETD5Q9C0A6 1442 aa13.82□□□□□ -0.2
BRPF3-211ENST00000534400 HECW1Q76N89 1606 aa13.82□□□□□ -0.2
BRPF3-211ENST00000534400 ZBTB7CA1YPR0 619 aa13.81□□□□□ -0.2
BRPF3-211ENST00000534400 ANP32CO43423 234 aa13.81□□□□□ -0.2
BRPF3-211ENST00000534400 VGFO15240 615 aaPredicted RBP13.8□□□□□ -0.2
BRPF3-211ENST00000534400 EIF4G2P78344 907 aaKnown RBP eCLIP13.8□□□□□ -0.2
BRPF3-211ENST00000534400 THEMISQ8N1K5 641 aaPredicted RBP13.8□□□□□ -0.2
BRPF3-211ENST00000534400 CARD11Q9BXL7 1154 aa13.8□□□□□ -0.2
BRPF3-211ENST00000534400 ADAMTS12P58397 1594 aa13.8□□□□□ -0.2
BRPF3-211ENST00000534400 KIF15Q9NS87 1388 aa13.79□□□□□ -0.2
BRPF3-211ENST00000534400 MPHOSPH9Q99550 1183 aa13.79□□□□□ -0.2
BRPF3-211ENST00000534400 ASXL2Q76L83 1435 aa13.79□□□□□ -0.2
BRPF3-211ENST00000534400 ZNF316A6NFI3 1004 aaPredicted RBP13.79□□□□□ -0.2
BRPF3-211ENST00000534400 ZNF644Q9H582 1327 aaPredicted RBP13.79□□□□□ -0.2
BRPF3-211ENST00000534400 A0A0G2JS52 829 aa13.78□□□□□ -0.2
BRPF3-211ENST00000534400 STK26Q9P289 416 aa13.78□□□□□ -0.2
BRPF3-211ENST00000534400 DENND4BO75064 1496 aaPredicted RBP13.77□□□□□ -0.21
BRPF3-211ENST00000534400 EPRSP07814 1512 aaKnown RBP13.76□□□□□ -0.21
BRPF3-211ENST00000534400 NCOA2Q15596 1464 aa13.75□□□□□ -0.21
BRPF3-211ENST00000534400 ARAP1Q96P48 1450 aa13.75□□□□□ -0.21
BRPF3-211ENST00000534400 AKNAQ7Z591 1439 aa13.75□□□□□ -0.21
BRPF3-211ENST00000534400 THOC2Q8NI27 1593 aaKnown RBP13.75□□□□□ -0.21
BRPF3-211ENST00000534400 NPM2Q86SE8 214 aaKnown RBP13.75□□□□□ -0.21
BRPF3-211ENST00000534400 SRPK2P78362 688 aaKnown RBP13.74□□□□□ -0.21
BRPF3-211ENST00000534400 DMRT2Q9Y5R5 561 aa13.73□□□□□ -0.21
BRPF3-211ENST00000534400 LRRC9Q6ZRR7 1453 aa13.73□□□□□ -0.21
BRPF3-211ENST00000534400 FGD6Q6ZV73 1430 aa13.73□□□□□ -0.21
BRPF3-211ENST00000534400 ADGRL1O94910 1474 aa13.73□□□□□ -0.21
BRPF3-211ENST00000534400 PPP6R1Q9UPN7 881 aa13.72□□□□□ -0.21
BRPF3-211ENST00000534400 MIA2Q96PC5 1412 aa13.72□□□□□ -0.21
BRPF3-211ENST00000534400 EHBP1L1Q8N3D4 1523 aa13.71□□□□□ -0.21
BRPF3-211ENST00000534400 ANKLE2Q86XL3 938 aa13.71□□□□□ -0.21
BRPF3-211ENST00000534400 TIMELESSQ9UNS1 1208 aa13.71□□□□□ -0.21
BRPF3-211ENST00000534400 CLSPNQ9HAW4 1339 aa13.71□□□□□ -0.21
BRPF3-211ENST00000534400 SAFB2Q14151 953 aaKnown RBP eCLIP13.7□□□□□ -0.22
BRPF3-211ENST00000534400 SLC52A1Q9NWF4 448 aa13.7□□□□□ -0.22
BRPF3-211ENST00000534400 WDR7Q9Y4E6 1490 aa13.69□□□□□ -0.22
BRPF3-211ENST00000534400 TXNDC2Q86VQ3 553 aa13.69□□□□□ -0.22
BRPF3-211ENST00000534400 CCDC144AA2RUR9 1427 aa13.69□□□□□ -0.22
BRPF3-211ENST00000534400 ABCC2Q92887 1545 aa13.69□□□□□ -0.22
BRPF3-211ENST00000534400 ANKRD50Q9ULJ7 1429 aa13.69□□□□□ -0.22
BRPF3-211ENST00000534400 UGGT2Q9NYU1 1516 aa13.68□□□□□ -0.22
BRPF3-211ENST00000534400 FANCAO15360 1455 aa13.68□□□□□ -0.22
BRPF3-211ENST00000534400 NUTM2DQ5VT03 806 aaPredicted RBP13.68□□□□□ -0.22
BRPF3-211ENST00000534400 STAC3Q96MF2 364 aa13.67□□□□□ -0.22
BRPF3-211ENST00000534400 CDK13Q14004 1512 aaKnown RBP13.67□□□□□ -0.22
BRPF3-211ENST00000534400 TMF1P82094 1093 aa13.67□□□□□ -0.22
BRPF3-211ENST00000534400 FOXD1Q16676 465 aa13.67□□□□□ -0.22
BRPF3-211ENST00000534400 TARBP1Q13395 1621 aaKnown RBP13.66□□□□□ -0.22
BRPF3-211ENST00000534400 ARHGEF11O15085 1522 aa13.66□□□□□ -0.22
BRPF3-211ENST00000534400 ATF3P18847 181 aa13.66□□□□□ -0.22
BRPF3-211ENST00000534400 CEP170Q5SW79 1584 aa13.66□□□□□ -0.22
BRPF3-211ENST00000534400 KNSTRNQ9Y448 316 aa13.65□□□□□ -0.22
BRPF3-211ENST00000534400 ATP10BO94823 1461 aa13.65□□□□□ -0.23
BRPF3-211ENST00000534400 RAB3GAP2Q9H2M9 1393 aa13.65□□□□□ -0.23
BRPF3-211ENST00000534400 HDGFL2Q7Z4V5 671 aaPredicted RBP13.64□□□□□ -0.23
BRPF3-211ENST00000534400 SIN3AQ96ST3 1273 aa13.64□□□□□ -0.23
BRPF3-211ENST00000534400 PAK3O75914 559 aaPredicted RBP13.64□□□□□ -0.23
BRPF3-211ENST00000534400 NGDNQ8NEJ9 315 aaKnown RBP13.64□□□□□ -0.23
BRPF3-211ENST00000534400 CFAP53Q96M91 514 aa13.64□□□□□ -0.23
BRPF3-211ENST00000534400 C9orf84Q5VXU9 1444 aa13.64□□□□□ -0.23
BRPF3-211ENST00000534400 ABCA5Q8WWZ7 1642 aa13.64□□□□□ -0.23
BRPF3-211ENST00000534400 KIF14Q15058 1648 aa13.64□□□□□ -0.23
BRPF3-211ENST00000534400 PBRM1Q86U86 1689 aa13.62□□□□□ -0.23
BRPF3-211ENST00000534400 PROSER2Q86WR7 435 aaPredicted RBP13.61□□□□□ -0.23
BRPF3-211ENST00000534400 DAXXQ9UER7 740 aaPredicted RBP13.61□□□□□ -0.23
BRPF3-211ENST00000534400 EIF3AQ14152 1382 aaKnown RBP13.61□□□□□ -0.23
BRPF3-211ENST00000534400 PLCH2O75038 1416 aa13.6□□□□□ -0.23
BRPF3-211ENST00000534400 PPM1GO15355 546 aaPredicted RBP13.6□□□□□ -0.23
BRPF3-211ENST00000534400 CCDC9Q9Y3X0 531 aaKnown RBP13.6□□□□□ -0.23
BRPF3-211ENST00000534400 CCDC141Q6ZP82 1450 aa13.6□□□□□ -0.23
BRPF3-211ENST00000534400 WDR43Q15061 677 aaKnown RBP eCLIP13.59□□□□□ -0.23
BRPF3-211ENST00000534400 KIAA0556O60303 1618 aa13.58□□□□□ -0.24
BRPF3-211ENST00000534400 RAPGEF6Q8TEU7 1601 aa13.57□□□□□ -0.24
BRPF3-211ENST00000534400 NUDCQ9Y266 331 aa13.56□□□□□ -0.24
BRPF3-211ENST00000534400 TERF2IPQ9NYB0 399 aa13.56□□□□□ -0.24
BRPF3-211ENST00000534400 CSB-PGBD3P0DP91 1061 aa13.56□□□□□ -0.24
BRPF3-211ENST00000534400 MEX3CQ5U5Q3 659 aaKnown RBP13.55□□□□□ -0.24
BRPF3-211ENST00000534400 TRAK1Q9UPV9 953 aa13.55□□□□□ -0.24
BRPF3-211ENST00000534400 ZBTB47Q9UFB7 747 aaPredicted RBP13.55□□□□□ -0.24
BRPF3-211ENST00000534400 ROCK2O75116 1388 aaKnown RBP13.55□□□□□ -0.24
BRPF3-211ENST00000534400 SUPT6HQ7KZ85 1726 aaKnown RBP13.54□□□□□ -0.24
BRPF3-211ENST00000534400 DDX10Q13206 875 aaKnown RBP13.54□□□□□ -0.24
BRPF3-211ENST00000534400 NUTM2FA1L443 756 aa13.53□□□□□ -0.24
BRPF3-211ENST00000534400 SOX12O15370 315 aa13.53□□□□□ -0.24
BRPF3-211ENST00000534400 CEBPAP49715 358 aaPredicted RBP13.53□□□□□ -0.24
BRPF3-211ENST00000534400 TIAM1Q13009 1591 aa13.53□□□□□ -0.24
BRPF3-211ENST00000534400 ZNF518AQ6AHZ1 1483 aa13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms