RNA–Protein interactions for RNA: ENST00000533671.1

NXF1-217, Transcript of nuclear RNA export factor 1, humanhuman

TSL 4

Gene NXF1, Length 589 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF1-217ENST00000533671 CDC42BPAQ5VT25 1732 aa27.57■■■□□ 2
NXF1-217ENST00000533671 ADGRL1O94910 1474 aa27.57■■■□□ 2
NXF1-217ENST00000533671 APLP2Q06481 763 aa27.56■■■□□ 2
NXF1-217ENST00000533671 RICTORQ6R327 1708 aa27.53■■■□□ 2
NXF1-217ENST00000533671 SCAPERQ9BY12 1400 aa27.52■■■□□ 2
NXF1-217ENST00000533671 CCNB3Q8WWL7 1395 aa27.52■■■□□ 2
NXF1-217ENST00000533671 SUPT6HQ7KZ85 1726 aaKnown RBP27.5■■□□□ 1.99
NXF1-217ENST00000533671 FRMPD1Q5SYB0 1578 aa27.5■■□□□ 1.99
NXF1-217ENST00000533671 ZNF777Q9ULD5 760 aaPredicted RBP27.48■■□□□ 1.99
NXF1-217ENST00000533671 MAP3K1Q13233 1512 aa27.46■■□□□ 1.99
NXF1-217ENST00000533671 GPATCH8Q9UKJ3 1502 aaKnown RBP27.46■■□□□ 1.99
NXF1-217ENST00000533671 CFDP1Q9UEE9 299 aaPredicted RBP27.45■■□□□ 1.98
NXF1-217ENST00000533671 ITSN2Q9NZM3 1697 aa27.45■■□□□ 1.98
NXF1-217ENST00000533671 LRRC9Q6ZRR7 1453 aa27.44■■□□□ 1.98
NXF1-217ENST00000533671 POGZQ7Z3K3 1410 aa27.43■■□□□ 1.98
NXF1-217ENST00000533671 AEBP2Q6ZN18 517 aaPredicted RBP27.43■■□□□ 1.98
NXF1-217ENST00000533671 MYT1LQ9UL68 1186 aa27.41■■□□□ 1.98
NXF1-217ENST00000533671 NCOA2Q15596 1464 aa27.4■■□□□ 1.98
NXF1-217ENST00000533671 ABCC1P33527 1531 aa27.39■■□□□ 1.98
NXF1-217ENST00000533671 ZNF518AQ6AHZ1 1483 aa27.38■■□□□ 1.97
NXF1-217ENST00000533671 ZMYM4Q5VZL5 1548 aa27.38■■□□□ 1.97
NXF1-217ENST00000533671 KANK4Q5T7N3 995 aaPredicted RBP27.38■■□□□ 1.97
NXF1-217ENST00000533671 SAMD9LQ8IVG5 1584 aa27.37■■□□□ 1.97
NXF1-217ENST00000533671 ZFYVE16Q7Z3T8 1539 aa27.36■■□□□ 1.97
NXF1-217ENST00000533671 AFAP1Q8N556 730 aa27.35■■□□□ 1.97
NXF1-217ENST00000533671 MAGI2Q86UL8 1455 aa27.35■■□□□ 1.97
NXF1-217ENST00000533671 ARHGEF40Q8TER5 1519 aa27.35■■□□□ 1.97
NXF1-217ENST00000533671 PLEKHH2Q8IVE3 1493 aa27.33■■□□□ 1.97
NXF1-217ENST00000533671 ARID4BQ4LE39 1312 aaPredicted RBP27.32■■□□□ 1.96
NXF1-217ENST00000533671 SYCP2Q9BX26 1530 aa27.31■■□□□ 1.96
NXF1-217ENST00000533671 ARHGEF12Q9NZN5 1544 aa27.31■■□□□ 1.96
NXF1-217ENST00000533671 KDM4FA0A1W2PPD8 638 aa27.3■■□□□ 1.96
NXF1-217ENST00000533671 HNRNPMP52272 730 aaKnown RBP eCLIP27.3■■□□□ 1.962e-7■□□□□ 9.4
NXF1-217ENST00000533671 TRAPPC8Q9Y2L5 1435 aa27.3■■□□□ 1.96
NXF1-217ENST00000533671 YEATS2Q9ULM3 1422 aa27.29■■□□□ 1.96
NXF1-217ENST00000533671 KDM5CP41229 1560 aa27.29■■□□□ 1.96
NXF1-217ENST00000533671 HECW2Q9P2P5 1572 aa27.28■■□□□ 1.96
NXF1-217ENST00000533671 KIAA1107Q9UPP5 1409 aa27.26■■□□□ 1.95
NXF1-217ENST00000533671 ZNF644Q9H582 1327 aaPredicted RBP27.25■■□□□ 1.95
NXF1-217ENST00000533671 ATP10AO60312 1499 aa27.22■■□□□ 1.95
NXF1-217ENST00000533671 MLH3Q9UHC1 1453 aa27.21■■□□□ 1.95
NXF1-217ENST00000533671 SPAG9O60271 1321 aaKnown RBP27.2■■□□□ 1.95
NXF1-217ENST00000533671 CAMSAP2Q08AD1 1489 aa27.2■■□□□ 1.95
NXF1-217ENST00000533671 MYOM3Q5VTT5 1437 aa27.18■■□□□ 1.94
NXF1-217ENST00000533671 C9orf84Q5VXU9 1444 aa27.18■■□□□ 1.94
NXF1-217ENST00000533671 KIDINS220Q9ULH0 1771 aa27.17■■□□□ 1.94
NXF1-217ENST00000533671 BCORL1Q5H9F3 1711 aa27.16■■□□□ 1.94
NXF1-217ENST00000533671 DIP2CQ9Y2E4 1556 aa27.16■■□□□ 1.94
NXF1-217ENST00000533671 ABCA6Q8N139 1617 aa27.16■■□□□ 1.94
NXF1-217ENST00000533671 MIA2Q96PC5 1412 aa27.14■■□□□ 1.93
NXF1-217ENST00000533671 MBD5Q9P267 1494 aa27.13■■□□□ 1.93
NXF1-217ENST00000533671 RSPH4AQ5TD94 716 aa27.12■■□□□ 1.93
NXF1-217ENST00000533671 ATP7AQ04656 1500 aa27.11■■□□□ 1.93
NXF1-217ENST00000533671 SIGLEC1Q9BZZ2 1709 aa27.11■■□□□ 1.93
NXF1-217ENST00000533671 MLECQ14165 292 aa27.11■■□□□ 1.93
NXF1-217ENST00000533671 CCDC141Q6ZP82 1450 aa27.1■■□□□ 1.93
NXF1-217ENST00000533671 ADAMTSL3P82987 1691 aa27.1■■□□□ 1.93
NXF1-217ENST00000533671 INO80Q9ULG1 1556 aaPredicted RBP27.09■■□□□ 1.93
NXF1-217ENST00000533671 TSPY4P0CV99 314 aa27.07■■□□□ 1.92
NXF1-217ENST00000533671 TSPY10P0CW01 314 aa27.07■■□□□ 1.92
NXF1-217ENST00000533671 ARHGEF5Q12774 1597 aa27.06■■□□□ 1.92
NXF1-217ENST00000533671 REREQ9P2R6 1566 aa27.06■■□□□ 1.92
NXF1-217ENST00000533671 PTPN23Q9H3S7 1636 aa27.06■■□□□ 1.92
NXF1-217ENST00000533671 MADDQ8WXG6 1647 aa27.05■■□□□ 1.92
NXF1-217ENST00000533671 ADGBQ8N7X0 1667 aa27.02■■□□□ 1.92
NXF1-217ENST00000533671 RTEL1-TNFRSF6BF6WH68 1400 aa27.02■■□□□ 1.92
NXF1-217ENST00000533671 FGD6Q6ZV73 1430 aa27.02■■□□□ 1.92
NXF1-217ENST00000533671 PPARGC1BQ86YN6 1023 aaKnown RBP27.02■■□□□ 1.92
NXF1-217ENST00000533671 RIMS1Q86UR5 1692 aaKnown RBP27.01■■□□□ 1.92
NXF1-217ENST00000533671 FER1L4A9Z1Z3 1794 aa27.01■■□□□ 1.91
NXF1-217ENST00000533671 A2MP01023 1474 aa26.99■■□□□ 1.91
NXF1-217ENST00000533671 AGLP35573 1532 aa26.98■■□□□ 1.91
NXF1-217ENST00000533671 PTPRMP28827 1452 aa26.95■■□□□ 1.91
NXF1-217ENST00000533671 ESF1Q9H501 851 aaKnown RBP26.95■■□□□ 1.9
NXF1-217ENST00000533671 FAM50AQ14320 339 aaKnown RBP26.94■■□□□ 1.9
NXF1-217ENST00000533671 PLPPR3Q6T4P5 718 aa26.94■■□□□ 1.9
NXF1-217ENST00000533671 TCOF1Q13428 1488 aaKnown RBP26.93■■□□□ 1.9
NXF1-217ENST00000533671 MAST1Q9Y2H9 1570 aa26.92■■□□□ 1.9
NXF1-217ENST00000533671 PLXNC1O60486 1568 aa26.9■■□□□ 1.9
NXF1-217ENST00000533671 CROCC2H7BZ55 1655 aa26.89■■□□□ 1.9
NXF1-217ENST00000533671 DNMT1P26358 1616 aaKnown RBP26.89■■□□□ 1.9
NXF1-217ENST00000533671 DHX29Q7Z478 1369 aaKnown RBP26.88■■□□□ 1.89
NXF1-217ENST00000533671 DAPK1P53355 1430 aa26.87■■□□□ 1.89
NXF1-217ENST00000533671 ABCC5O15440 1437 aa26.86■■□□□ 1.89
NXF1-217ENST00000533671 GGT6Q6P531 493 aa26.86■■□□□ 1.89
NXF1-217ENST00000533671 SHANK2Q9UPX8 1470 aa26.83■■□□□ 1.89
NXF1-217ENST00000533671 KIF3BO15066 747 aa26.82■■□□□ 1.88
NXF1-217ENST00000533671 CHIC2Q9UKJ5 165 aa26.81■■□□□ 1.88
NXF1-217ENST00000533671 CNTLNQ9NXG0 1405 aa26.78■■□□□ 1.88
NXF1-217ENST00000533671 RRP7BPQ9NSQ0 103 aa26.77■■□□□ 1.88
NXF1-217ENST00000533671 CEBPAP49715 358 aaPredicted RBP26.76■■□□□ 1.87
NXF1-217ENST00000533671 CLTCQ00610 1675 aaKnown RBP26.76■■□□□ 1.87
NXF1-217ENST00000533671 DUOX2Q9NRD8 1548 aa26.75■■□□□ 1.87
NXF1-217ENST00000533671 ANKRD30AQ9BXX3 1397 aa26.75■■□□□ 1.87
NXF1-217ENST00000533671 KIF15Q9NS87 1388 aa26.75■■□□□ 1.87
NXF1-217ENST00000533671 C3P01024 1663 aa26.74■■□□□ 1.87
NXF1-217ENST00000533671 PPP6R1Q9UPN7 881 aa26.74■■□□□ 1.87
NXF1-217ENST00000533671 MROH2AA6NES4 1674 aa26.73■■□□□ 1.87
NXF1-217ENST00000533671 EIF2AK4Q9P2K8 1649 aaKnown RBP26.72■■□□□ 1.87
NXF1-217ENST00000533671 ITGAEP38570 1179 aa26.7■■□□□ 1.86
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms