RNA–Protein interactions for RNA: ENST00000533632.5

TRAPPC4-214, Transcript of trafficking protein particle complex 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAPPC4, Length 1,759 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-214ENST00000533632 FANCAO15360 1455 aa20.78■□□□□ 0.92
TRAPPC4-214ENST00000533632 PHLDB1Q86UU1 1377 aa20.77■□□□□ 0.92
TRAPPC4-214ENST00000533632 GPATCH8Q9UKJ3 1502 aaKnown RBP20.76■□□□□ 0.91
TRAPPC4-214ENST00000533632 CFAP74Q9C0B2 1584 aa20.76■□□□□ 0.91
TRAPPC4-214ENST00000533632 ARHGAP5Q13017 1502 aa20.73■□□□□ 0.91
TRAPPC4-214ENST00000533632 AKNAQ7Z591 1439 aa20.73■□□□□ 0.91
TRAPPC4-214ENST00000533632 FRMPD1Q5SYB0 1578 aa20.71■□□□□ 0.91
TRAPPC4-214ENST00000533632 ITSN2Q9NZM3 1697 aa20.7■□□□□ 0.9
TRAPPC4-214ENST00000533632 RICTORQ6R327 1708 aa20.7■□□□□ 0.9
TRAPPC4-214ENST00000533632 MYOM3Q5VTT5 1437 aa20.69■□□□□ 0.9
TRAPPC4-214ENST00000533632 CCNB3Q8WWL7 1395 aa20.69■□□□□ 0.9
TRAPPC4-214ENST00000533632 SAMD9LQ8IVG5 1584 aa20.68■□□□□ 0.9
TRAPPC4-214ENST00000533632 EFCAB2Q5VUJ9 269 aa20.67■□□□□ 0.9
TRAPPC4-214ENST00000533632 ADGRL1O94910 1474 aa20.66■□□□□ 0.9
TRAPPC4-214ENST00000533632 ABCC1P33527 1531 aa20.66■□□□□ 0.9
TRAPPC4-214ENST00000533632 ARHGEF12Q9NZN5 1544 aa20.65■□□□□ 0.9
TRAPPC4-214ENST00000533632 FGD6Q6ZV73 1430 aa20.64■□□□□ 0.9
TRAPPC4-214ENST00000533632 SCAPERQ9BY12 1400 aa20.63■□□□□ 0.89
TRAPPC4-214ENST00000533632 RAPGEF3O95398 923 aa20.63■□□□□ 0.89
TRAPPC4-214ENST00000533632 DENND4BO75064 1496 aaPredicted RBP20.63■□□□□ 0.89
TRAPPC4-214ENST00000533632 PTPN23Q9H3S7 1636 aa20.61■□□□□ 0.89
TRAPPC4-214ENST00000533632 POGZQ7Z3K3 1410 aa20.6■□□□□ 0.89
TRAPPC4-214ENST00000533632 RRBP1Q9P2E9 1410 aaKnown RBP20.6■□□□□ 0.89
TRAPPC4-214ENST00000533632 CFDP1Q9UEE9 299 aaPredicted RBP20.6■□□□□ 0.89
TRAPPC4-214ENST00000533632 MIA2Q96PC5 1412 aa20.6■□□□□ 0.89
TRAPPC4-214ENST00000533632 ZMYM4Q5VZL5 1548 aa20.59■□□□□ 0.89
TRAPPC4-214ENST00000533632 SYCP2Q9BX26 1530 aa20.59■□□□□ 0.89
TRAPPC4-214ENST00000533632 ZNF644Q9H582 1327 aaPredicted RBP20.58■□□□□ 0.89
TRAPPC4-214ENST00000533632 KDM5CP41229 1560 aa20.57■□□□□ 0.88
TRAPPC4-214ENST00000533632 TRIM26Q12899 539 aaPredicted RBP20.57■□□□□ 0.88
TRAPPC4-214ENST00000533632 TRAPPC8Q9Y2L5 1435 aa20.57■□□□□ 0.88
TRAPPC4-214ENST00000533632 ZNF777Q9ULD5 760 aaPredicted RBP20.57■□□□□ 0.88
TRAPPC4-214ENST00000533632 CAMSAP2Q08AD1 1489 aa20.56■□□□□ 0.88
TRAPPC4-214ENST00000533632 TCOF1Q13428 1488 aaKnown RBP20.56■□□□□ 0.88
TRAPPC4-214ENST00000533632 KIAA1107Q9UPP5 1409 aa20.55■□□□□ 0.88
TRAPPC4-214ENST00000533632 ZNF518AQ6AHZ1 1483 aa20.54■□□□□ 0.88
TRAPPC4-214ENST00000533632 MBD5Q9P267 1494 aa20.54■□□□□ 0.88
TRAPPC4-214ENST00000533632 PLEKHH2Q8IVE3 1493 aa20.53■□□□□ 0.88
TRAPPC4-214ENST00000533632 AFAP1Q8N556 730 aa20.52■□□□□ 0.88
TRAPPC4-214ENST00000533632 HNRNPMP52272 730 aaKnown RBP eCLIP20.51■□□□□ 0.87
TRAPPC4-214ENST00000533632 ARHGEF40Q8TER5 1519 aa20.5■□□□□ 0.87
TRAPPC4-214ENST00000533632 YEATS2Q9ULM3 1422 aa20.49■□□□□ 0.87
TRAPPC4-214ENST00000533632 FAM50AQ14320 339 aaKnown RBP20.49■□□□□ 0.87
TRAPPC4-214ENST00000533632 HECW2Q9P2P5 1572 aa20.49■□□□□ 0.87
TRAPPC4-214ENST00000533632 KIDINS220Q9ULH0 1771 aa20.48■□□□□ 0.87
TRAPPC4-214ENST00000533632 MAGI2Q86UL8 1455 aa20.48■□□□□ 0.87
TRAPPC4-214ENST00000533632 ZFYVE16Q7Z3T8 1539 aa20.47■□□□□ 0.87
TRAPPC4-214ENST00000533632 SIGLEC1Q9BZZ2 1709 aa20.47■□□□□ 0.87
TRAPPC4-214ENST00000533632 PCGF6Q9BYE7 350 aa20.47■□□□□ 0.87
TRAPPC4-214ENST00000533632 ARHGEF5Q12774 1597 aa20.47■□□□□ 0.87
TRAPPC4-214ENST00000533632 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP20.47■□□□□ 0.873e-6■■■■□ 26.4
TRAPPC4-214ENST00000533632 MLH3Q9UHC1 1453 aa20.47■□□□□ 0.87
TRAPPC4-214ENST00000533632 DNMT1P26358 1616 aaKnown RBP20.46■□□□□ 0.87
TRAPPC4-214ENST00000533632 INO80Q9ULG1 1556 aaPredicted RBP20.46■□□□□ 0.87
TRAPPC4-214ENST00000533632 ABCA6Q8N139 1617 aa20.45■□□□□ 0.86
TRAPPC4-214ENST00000533632 DIP2CQ9Y2E4 1556 aa20.43■□□□□ 0.86
TRAPPC4-214ENST00000533632 CROCC2H7BZ55 1655 aa20.43■□□□□ 0.86
TRAPPC4-214ENST00000533632 CCDC141Q6ZP82 1450 aa20.42■□□□□ 0.86
TRAPPC4-214ENST00000533632 PTPRKQ15262 1439 aa20.42■□□□□ 0.86
TRAPPC4-214ENST00000533632 ABCC5O15440 1437 aa20.41■□□□□ 0.86
TRAPPC4-214ENST00000533632 DAPK1P53355 1430 aa20.41■□□□□ 0.86
TRAPPC4-214ENST00000533632 ATP7AQ04656 1500 aa20.41■□□□□ 0.86
TRAPPC4-214ENST00000533632 ITGAEP38570 1179 aa20.38■□□□□ 0.85
TRAPPC4-214ENST00000533632 ATP10AO60312 1499 aa20.37■□□□□ 0.85
TRAPPC4-214ENST00000533632 SPAG9O60271 1321 aaKnown RBP20.37■□□□□ 0.85
TRAPPC4-214ENST00000533632 MAST1Q9Y2H9 1570 aa20.36■□□□□ 0.85
TRAPPC4-214ENST00000533632 REREQ9P2R6 1566 aa20.36■□□□□ 0.85
TRAPPC4-214ENST00000533632 ADGBQ8N7X0 1667 aa20.35■□□□□ 0.85
TRAPPC4-214ENST00000533632 RSPH4AQ5TD94 716 aa20.35■□□□□ 0.85
TRAPPC4-214ENST00000533632 RTEL1-TNFRSF6BF6WH68 1400 aa20.35■□□□□ 0.85
TRAPPC4-214ENST00000533632 C9orf84Q5VXU9 1444 aa20.34■□□□□ 0.85
TRAPPC4-214ENST00000533632 SHANK2Q9UPX8 1470 aa20.33■□□□□ 0.85
TRAPPC4-214ENST00000533632 PLXNC1O60486 1568 aa20.32■□□□□ 0.84
TRAPPC4-214ENST00000533632 BCORL1Q5H9F3 1711 aa20.31■□□□□ 0.84
TRAPPC4-214ENST00000533632 CHIC2Q9UKJ5 165 aa20.3■□□□□ 0.84
TRAPPC4-214ENST00000533632 MYT1LQ9UL68 1186 aa20.29■□□□□ 0.84
TRAPPC4-214ENST00000533632 KDM4FA0A1W2PPD8 638 aa20.28■□□□□ 0.84
TRAPPC4-214ENST00000533632 ADAMTSL3P82987 1691 aa20.27■□□□□ 0.84
TRAPPC4-214ENST00000533632 ADGRL2O95490 1459 aa20.27■□□□□ 0.84
TRAPPC4-214ENST00000533632 AGLP35573 1532 aa20.27■□□□□ 0.84
TRAPPC4-214ENST00000533632 A2MP01023 1474 aa20.26■□□□□ 0.83
TRAPPC4-214ENST00000533632 TSPY4P0CV99 314 aa20.26■□□□□ 0.83
TRAPPC4-214ENST00000533632 TSPY10P0CW01 314 aa20.26■□□□□ 0.83
TRAPPC4-214ENST00000533632 NCOA1Q15788 1441 aa20.24■□□□□ 0.83
TRAPPC4-214ENST00000533632 ROCK1Q13464 1354 aa20.23■□□□□ 0.83
TRAPPC4-214ENST00000533632 GCC2Q8IWJ2 1684 aa20.22■□□□□ 0.83
TRAPPC4-214ENST00000533632 RRP7BPQ9NSQ0 103 aa20.21■□□□□ 0.83
TRAPPC4-214ENST00000533632 ARID4BQ4LE39 1312 aaPredicted RBP20.21■□□□□ 0.83
TRAPPC4-214ENST00000533632 MADDQ8WXG6 1647 aa20.21■□□□□ 0.83
TRAPPC4-214ENST00000533632 DHX29Q7Z478 1369 aaKnown RBP20.21■□□□□ 0.83
TRAPPC4-214ENST00000533632 ANKRD30AQ9BXX3 1397 aa20.2■□□□□ 0.82
TRAPPC4-214ENST00000533632 HFM1A2PYH4 1435 aa20.19■□□□□ 0.82
TRAPPC4-214ENST00000533632 NAIPQ13075 1403 aa20.19■□□□□ 0.82
TRAPPC4-214ENST00000533632 KIF15Q9NS87 1388 aa20.18■□□□□ 0.82
TRAPPC4-214ENST00000533632 FER1L4A9Z1Z3 1794 aa20.17■□□□□ 0.82
TRAPPC4-214ENST00000533632 DUOX2Q9NRD8 1548 aa20.17■□□□□ 0.82
TRAPPC4-214ENST00000533632 MLECQ14165 292 aa20.15■□□□□ 0.82
TRAPPC4-214ENST00000533632 RIMS1Q86UR5 1692 aaKnown RBP20.15■□□□□ 0.82
TRAPPC4-214ENST00000533632 EIF2AK4Q9P2K8 1649 aaKnown RBP20.15■□□□□ 0.82
TRAPPC4-214ENST00000533632 RNF17Q9BXT8 1623 aaKnown RBP20.13■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms