RNA–Protein interactions for RNA: ENST00000533411.5

SOX6-215, Transcript of SRY-box 6, humanhuman

TSL 4

Gene SOX6, Length 586 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX6-215ENST00000533411 NEO1Q92859 1461 aa10.89□□□□□ -0.67
SOX6-215ENST00000533411 RAPGEF3O95398 923 aa10.88□□□□□ -0.67
SOX6-215ENST00000533411 CASKIN1Q8WXD9 1431 aa10.87□□□□□ -0.67
SOX6-215ENST00000533411 HOXD11P31277 338 aaPredicted RBP10.87□□□□□ -0.67
SOX6-215ENST00000533411 RNF39Q9H2S5 420 aa10.87□□□□□ -0.67
SOX6-215ENST00000533411 FANCAO15360 1455 aa10.87□□□□□ -0.67
SOX6-215ENST00000533411 MYO5CQ9NQX4 1742 aa10.87□□□□□ -0.67
SOX6-215ENST00000533411 CFAP74Q9C0B2 1584 aa10.86□□□□□ -0.67
SOX6-215ENST00000533411 PHLDB1Q86UU1 1377 aa10.86□□□□□ -0.67
SOX6-215ENST00000533411 RICTORQ6R327 1708 aa10.86□□□□□ -0.67
SOX6-215ENST00000533411 TROQ12816 1431 aaPredicted RBP10.85□□□□□ -0.67
SOX6-215ENST00000533411 AKNAQ7Z591 1439 aa10.85□□□□□ -0.67
SOX6-215ENST00000533411 CCDC18Q5T9S5 1454 aa10.84□□□□□ -0.67
SOX6-215ENST00000533411 FYCO1Q9BQS8 1478 aa10.84□□□□□ -0.67
SOX6-215ENST00000533411 DENND4BO75064 1496 aaPredicted RBP10.83□□□□□ -0.68
SOX6-215ENST00000533411 CNKSR2Q8WXI2 1034 aa10.83□□□□□ -0.68
SOX6-215ENST00000533411 CDK11AQ9UQ88 783 aaPredicted RBP10.83□□□□□ -0.68
SOX6-215ENST00000533411 PLCH2O75038 1416 aa10.83□□□□□ -0.68
SOX6-215ENST00000533411 CDC42BPBQ9Y5S2 1711 aa10.81□□□□□ -0.68
SOX6-215ENST00000533411 ARHGEF40Q8TER5 1519 aa10.81□□□□□ -0.68
SOX6-215ENST00000533411 APLP2Q06481 763 aa10.81□□□□□ -0.68
SOX6-215ENST00000533411 ARHGAP5Q13017 1502 aa10.8□□□□□ -0.68
SOX6-215ENST00000533411 CDC42BPAQ5VT25 1732 aa10.79□□□□□ -0.68
SOX6-215ENST00000533411 SCAPERQ9BY12 1400 aa10.79□□□□□ -0.68
SOX6-215ENST00000533411 PREX2Q70Z35 1606 aa10.79□□□□□ -0.68
SOX6-215ENST00000533411 ZMYM4Q5VZL5 1548 aa10.79□□□□□ -0.68
SOX6-215ENST00000533411 SIGLEC1Q9BZZ2 1709 aa10.78□□□□□ -0.68
SOX6-215ENST00000533411 POGZQ7Z3K3 1410 aa10.78□□□□□ -0.68
SOX6-215ENST00000533411 YEATS2Q9ULM3 1422 aa10.78□□□□□ -0.68
SOX6-215ENST00000533411 MAP3K1Q13233 1512 aa10.78□□□□□ -0.68
SOX6-215ENST00000533411 TIAM1Q13009 1591 aa10.77□□□□□ -0.68
SOX6-215ENST00000533411 EFCAB2Q5VUJ9 269 aa10.77□□□□□ -0.69
SOX6-215ENST00000533411 PPARGC1BQ86YN6 1023 aaKnown RBP10.77□□□□□ -0.69
SOX6-215ENST00000533411 RNF216Q9NWF9 866 aaPredicted RBP10.77□□□□□ -0.69
SOX6-215ENST00000533411 BCORL1Q5H9F3 1711 aa10.77□□□□□ -0.69
SOX6-215ENST00000533411 ZFYVE16Q7Z3T8 1539 aa10.77□□□□□ -0.69
SOX6-215ENST00000533411 ADAMTSL3P82987 1691 aa10.76□□□□□ -0.69
SOX6-215ENST00000533411 ARID4BQ4LE39 1312 aaPredicted RBP10.75□□□□□ -0.69
SOX6-215ENST00000533411 ITSN2Q9NZM3 1697 aa10.75□□□□□ -0.69
SOX6-215ENST00000533411 MADDQ8WXG6 1647 aa10.74□□□□□ -0.69
SOX6-215ENST00000533411 ABCC1P33527 1531 aa10.74□□□□□ -0.69
SOX6-215ENST00000533411 ARHGEF12Q9NZN5 1544 aa10.74□□□□□ -0.69
SOX6-215ENST00000533411 MTUS2Q5JR59 1369 aa10.73□□□□□ -0.69
SOX6-215ENST00000533411 ZNF518AQ6AHZ1 1483 aa10.73□□□□□ -0.69
SOX6-215ENST00000533411 KDM5CP41229 1560 aa10.73□□□□□ -0.69
SOX6-215ENST00000533411 AFAP1Q8N556 730 aa10.72□□□□□ -0.69
SOX6-215ENST00000533411 MAGI2Q86UL8 1455 aa10.72□□□□□ -0.69
SOX6-215ENST00000533411 SAMD9LQ8IVG5 1584 aa10.72□□□□□ -0.69
SOX6-215ENST00000533411 RIMS1Q86UR5 1692 aaKnown RBP10.72□□□□□ -0.69
SOX6-215ENST00000533411 EHBP1L1Q8N3D4 1523 aa10.71□□□□□ -0.69
SOX6-215ENST00000533411 HECW2Q9P2P5 1572 aa10.71□□□□□ -0.69
SOX6-215ENST00000533411 GPATCH8Q9UKJ3 1502 aaKnown RBP10.71□□□□□ -0.69
SOX6-215ENST00000533411 TRAPPC8Q9Y2L5 1435 aa10.71□□□□□ -0.69
SOX6-215ENST00000533411 PTPRMP28827 1452 aa10.7□□□□□ -0.7
SOX6-215ENST00000533411 C1QBPQ07021 282 aaKnown RBP10.7□□□□□ -0.7
SOX6-215ENST00000533411 ZNF777Q9ULD5 760 aaPredicted RBP10.7□□□□□ -0.7
SOX6-215ENST00000533411 ABCA6Q8N139 1617 aa10.69□□□□□ -0.7
SOX6-215ENST00000533411 DIP2CQ9Y2E4 1556 aa10.69□□□□□ -0.7
SOX6-215ENST00000533411 SYCP2Q9BX26 1530 aa10.69□□□□□ -0.7
SOX6-215ENST00000533411 ATP10AO60312 1499 aa10.69□□□□□ -0.7
SOX6-215ENST00000533411 CCNB3Q8WWL7 1395 aa10.69□□□□□ -0.7
SOX6-215ENST00000533411 HRCP23327 699 aa10.69□□□□□ -0.7
SOX6-215ENST00000533411 C9orf84Q5VXU9 1444 aa10.68□□□□□ -0.7
SOX6-215ENST00000533411 MYT1LQ9UL68 1186 aa10.68□□□□□ -0.7
SOX6-215ENST00000533411 FER1L4A9Z1Z3 1794 aa10.67□□□□□ -0.7
SOX6-215ENST00000533411 KIDINS220Q9ULH0 1771 aa10.67□□□□□ -0.7
SOX6-215ENST00000533411 MLECQ14165 292 aa10.67□□□□□ -0.7
SOX6-215ENST00000533411 LRRC9Q6ZRR7 1453 aa10.67□□□□□ -0.7
SOX6-215ENST00000533411 CFDP1Q9UEE9 299 aaPredicted RBP10.66□□□□□ -0.7
SOX6-215ENST00000533411 SUPT6HQ7KZ85 1726 aaKnown RBP10.66□□□□□ -0.7
SOX6-215ENST00000533411 MLH3Q9UHC1 1453 aa10.66□□□□□ -0.7
SOX6-215ENST00000533411 HNRNPMP52272 730 aaKnown RBP eCLIP10.65□□□□□ -0.7
SOX6-215ENST00000533411 ZNF644Q9H582 1327 aaPredicted RBP10.64□□□□□ -0.71
SOX6-215ENST00000533411 NCOA2Q15596 1464 aa10.64□□□□□ -0.71
SOX6-215ENST00000533411 RRBP1Q9P2E9 1410 aaKnown RBP10.63□□□□□ -0.71
SOX6-215ENST00000533411 REREQ9P2R6 1566 aa10.63□□□□□ -0.71
SOX6-215ENST00000533411 INO80Q9ULG1 1556 aaPredicted RBP10.63□□□□□ -0.71
SOX6-215ENST00000533411 ATP7AQ04656 1500 aa10.63□□□□□ -0.71
SOX6-215ENST00000533411 PLEKHH2Q8IVE3 1493 aa10.61□□□□□ -0.71
SOX6-215ENST00000533411 KIAA1107Q9UPP5 1409 aa10.61□□□□□ -0.71
SOX6-215ENST00000533411 KANK4Q5T7N3 995 aaPredicted RBP10.61□□□□□ -0.71
SOX6-215ENST00000533411 SPAG9O60271 1321 aaKnown RBP10.6□□□□□ -0.71
SOX6-215ENST00000533411 CAMSAP2Q08AD1 1489 aa10.6□□□□□ -0.71
SOX6-215ENST00000533411 MBD5Q9P267 1494 aa10.6□□□□□ -0.71
SOX6-215ENST00000533411 AGLP35573 1532 aa10.59□□□□□ -0.71
SOX6-215ENST00000533411 LMTK3Q96Q04 1460 aa10.58□□□□□ -0.72
SOX6-215ENST00000533411 ZEB1P37275 1124 aaPredicted RBP10.58□□□□□ -0.72
SOX6-215ENST00000533411 CEBPAP49715 358 aaPredicted RBP10.58□□□□□ -0.72
SOX6-215ENST00000533411 ADGBQ8N7X0 1667 aa10.57□□□□□ -0.72
SOX6-215ENST00000533411 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.57□□□□□ -0.72
SOX6-215ENST00000533411 C3P01024 1663 aa10.57□□□□□ -0.72
SOX6-215ENST00000533411 PLXNC1O60486 1568 aa10.56□□□□□ -0.72
SOX6-215ENST00000533411 A2MP01023 1474 aa10.55□□□□□ -0.72
SOX6-215ENST00000533411 CCDC141Q6ZP82 1450 aa10.55□□□□□ -0.72
SOX6-215ENST00000533411 HSPA2P54652 639 aa10.55□□□□□ -0.72
SOX6-215ENST00000533411 PREX1Q8TCU6 1659 aa10.54□□□□□ -0.72
SOX6-215ENST00000533411 ARHGEF5Q12774 1597 aa10.54□□□□□ -0.72
SOX6-215ENST00000533411 MYOM3Q5VTT5 1437 aa10.54□□□□□ -0.72
SOX6-215ENST00000533411 CLTCQ00610 1675 aaKnown RBP10.53□□□□□ -0.72
SOX6-215ENST00000533411 RTEL1-TNFRSF6BF6WH68 1400 aa10.52□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms