RNA–Protein interactions for RNA: ENST00000533370.1

TGFBR3-211, Transcript of transforming growth factor beta receptor 3, humanhuman

TSL 4

Gene TGFBR3, Length 563 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3-211ENST00000533370 ABCC10Q5T3U5 1492 aa18.48■□□□□ 0.55
TGFBR3-211ENST00000533370 KIF14Q15058 1648 aa18.48■□□□□ 0.55
TGFBR3-211ENST00000533370 GPATCH8Q9UKJ3 1502 aaKnown RBP18.48■□□□□ 0.55
TGFBR3-211ENST00000533370 TCOF1Q13428 1488 aaKnown RBP18.45■□□□□ 0.54
TGFBR3-211ENST00000533370 ASXL2Q76L83 1435 aa18.44■□□□□ 0.54
TGFBR3-211ENST00000533370 ITGAEP38570 1179 aa18.44■□□□□ 0.54
TGFBR3-211ENST00000533370 WDR7Q9Y4E6 1490 aa18.44■□□□□ 0.54
TGFBR3-211ENST00000533370 PTPN23Q9H3S7 1636 aa18.41■□□□□ 0.54
TGFBR3-211ENST00000533370 MAPK8IP2Q13387 824 aaPredicted RBP18.4■□□□□ 0.54
TGFBR3-211ENST00000533370 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP18.39■□□□□ 0.54
TGFBR3-211ENST00000533370 ZNF644Q9H582 1327 aaPredicted RBP18.39■□□□□ 0.53
TGFBR3-211ENST00000533370 ZNF777Q9ULD5 760 aaPredicted RBP18.38■□□□□ 0.53
TGFBR3-211ENST00000533370 ITSN2Q9NZM3 1697 aa18.38■□□□□ 0.53
TGFBR3-211ENST00000533370 PLCH2O75038 1416 aa18.36■□□□□ 0.53
TGFBR3-211ENST00000533370 EFCAB2Q5VUJ9 269 aa18.36■□□□□ 0.53
TGFBR3-211ENST00000533370 RSPH4AQ5TD94 716 aa18.34■□□□□ 0.53
TGFBR3-211ENST00000533370 CDC42BPAQ5VT25 1732 aa18.32■□□□□ 0.52
TGFBR3-211ENST00000533370 HRCP23327 699 aa18.32■□□□□ 0.52
TGFBR3-211ENST00000533370 TTC37Q6PGP7 1564 aa18.32■□□□□ 0.52
TGFBR3-211ENST00000533370 MAPKBP1O60336 1514 aa18.32■□□□□ 0.52
TGFBR3-211ENST00000533370 CAMSAP2Q08AD1 1489 aa18.32■□□□□ 0.52
TGFBR3-211ENST00000533370 PTPRKQ15262 1439 aa18.32■□□□□ 0.52
TGFBR3-211ENST00000533370 PREX2Q70Z35 1606 aa18.29■□□□□ 0.52
TGFBR3-211ENST00000533370 ABCC5O15440 1437 aa18.29■□□□□ 0.52
TGFBR3-211ENST00000533370 SETD5Q9C0A6 1442 aa18.29■□□□□ 0.52
TGFBR3-211ENST00000533370 ARHGAP5Q13017 1502 aa18.28■□□□□ 0.52
TGFBR3-211ENST00000533370 ARAP3Q8WWN8 1544 aa18.28■□□□□ 0.52
TGFBR3-211ENST00000533370 HNRNPMP52272 730 aaKnown RBP eCLIP18.28■□□□□ 0.522e-6■■□□□ 12.3
TGFBR3-211ENST00000533370 DAPK1P53355 1430 aa18.28■□□□□ 0.52
TGFBR3-211ENST00000533370 ABCA9Q8IUA7 1624 aa18.27■□□□□ 0.52
TGFBR3-211ENST00000533370 PLEKHH2Q8IVE3 1493 aa18.27■□□□□ 0.52
TGFBR3-211ENST00000533370 KIAA1107Q9UPP5 1409 aa18.27■□□□□ 0.52
TGFBR3-211ENST00000533370 CHIC2Q9UKJ5 165 aa18.27■□□□□ 0.52
TGFBR3-211ENST00000533370 TSPY4P0CV99 314 aa18.26■□□□□ 0.51
TGFBR3-211ENST00000533370 TSPY10P0CW01 314 aa18.26■□□□□ 0.51
TGFBR3-211ENST00000533370 MYO5CQ9NQX4 1742 aa18.26■□□□□ 0.51
TGFBR3-211ENST00000533370 CDC42BPBQ9Y5S2 1711 aa18.26■□□□□ 0.51
TGFBR3-211ENST00000533370 ROCK1Q13464 1354 aa18.25■□□□□ 0.51
TGFBR3-211ENST00000533370 CD109Q6YHK3 1445 aa18.24■□□□□ 0.51
TGFBR3-211ENST00000533370 DNMT1P26358 1616 aaKnown RBP18.24■□□□□ 0.51
TGFBR3-211ENST00000533370 HFM1A2PYH4 1435 aa18.23■□□□□ 0.51
TGFBR3-211ENST00000533370 AKNAQ7Z591 1439 aa18.23■□□□□ 0.51
TGFBR3-211ENST00000533370 MBD5Q9P267 1494 aa18.23■□□□□ 0.51
TGFBR3-211ENST00000533370 CCER1Q8TC90 406 aaPredicted RBP18.23■□□□□ 0.51
TGFBR3-211ENST00000533370 RAB3GAP2Q9H2M9 1393 aa18.22■□□□□ 0.51
TGFBR3-211ENST00000533370 SAMD9LQ8IVG5 1584 aa18.21■□□□□ 0.51
TGFBR3-211ENST00000533370 RRP7BPQ9NSQ0 103 aa18.21■□□□□ 0.51
TGFBR3-211ENST00000533370 ARHGEF5Q12774 1597 aa18.21■□□□□ 0.51
TGFBR3-211ENST00000533370 ACIN1Q9UKV3 1341 aaKnown RBP18.21■□□□□ 0.51
TGFBR3-211ENST00000533370 FAM69CQ0P6D2 419 aa18.2■□□□□ 0.5
TGFBR3-211ENST00000533370 NAIPQ13075 1403 aa18.2■□□□□ 0.5
TGFBR3-211ENST00000533370 GLI2P10070 1586 aa18.19■□□□□ 0.5
TGFBR3-211ENST00000533370 RNF216Q9NWF9 866 aaPredicted RBP18.19■□□□□ 0.5
TGFBR3-211ENST00000533370 FANCAO15360 1455 aa18.19■□□□□ 0.5
TGFBR3-211ENST00000533370 ANKRD30AQ9BXX3 1397 aa18.18■□□□□ 0.5
TGFBR3-211ENST00000533370 ZEB1P37275 1124 aaPredicted RBP18.17■□□□□ 0.5
TGFBR3-211ENST00000533370 CCDC141Q6ZP82 1450 aa18.17■□□□□ 0.5
TGFBR3-211ENST00000533370 SHANK2Q9UPX8 1470 aa18.17■□□□□ 0.5
TGFBR3-211ENST00000533370 NCOA1Q15788 1441 aa18.16■□□□□ 0.5
TGFBR3-211ENST00000533370 C9orf84Q5VXU9 1444 aa18.15■□□□□ 0.5
TGFBR3-211ENST00000533370 ADGRL2O95490 1459 aa18.15■□□□□ 0.5
TGFBR3-211ENST00000533370 ARHGEF12Q9NZN5 1544 aa18.14■□□□□ 0.49
TGFBR3-211ENST00000533370 SYCP2Q9BX26 1530 aa18.13■□□□□ 0.49
TGFBR3-211ENST00000533370 ABCC1P33527 1531 aa18.13■□□□□ 0.49
TGFBR3-211ENST00000533370 SCAPERQ9BY12 1400 aa18.12■□□□□ 0.49
TGFBR3-211ENST00000533370 ZBTB22O15209 634 aa18.11■□□□□ 0.49
TGFBR3-211ENST00000533370 AFAP1Q8N556 730 aa18.11■□□□□ 0.49
TGFBR3-211ENST00000533370 NEO1Q92859 1461 aa18.11■□□□□ 0.49
TGFBR3-211ENST00000533370 ADGRL1O94910 1474 aa18.1■□□□□ 0.49
TGFBR3-211ENST00000533370 TRAPPC8Q9Y2L5 1435 aa18.1■□□□□ 0.49
TGFBR3-211ENST00000533370 DHX57Q6P158 1386 aaKnown RBP18.1■□□□□ 0.49
TGFBR3-211ENST00000533370 CLSPNQ9HAW4 1339 aa18.1■□□□□ 0.49
TGFBR3-211ENST00000533370 CROCC2H7BZ55 1655 aa18.09■□□□□ 0.49
TGFBR3-211ENST00000533370 DIP2BQ9P265 1576 aa18.09■□□□□ 0.49
TGFBR3-211ENST00000533370 SPAG9O60271 1321 aaKnown RBP18.09■□□□□ 0.49
TGFBR3-211ENST00000533370 MAP3K4Q9Y6R4 1608 aa18.09■□□□□ 0.49
TGFBR3-211ENST00000533370 CFAP74Q9C0B2 1584 aa18.08■□□□□ 0.49
TGFBR3-211ENST00000533370 MAST1Q9Y2H9 1570 aa18.08■□□□□ 0.49
TGFBR3-211ENST00000533370 RTEL1-TNFRSF6BF6WH68 1400 aa18.08■□□□□ 0.49
TGFBR3-211ENST00000533370 KIF15Q9NS87 1388 aa18.06■□□□□ 0.48
TGFBR3-211ENST00000533370 ADGBQ8N7X0 1667 aa18.06■□□□□ 0.48
TGFBR3-211ENST00000533370 DMRT2Q9Y5R5 561 aa18.06■□□□□ 0.48
TGFBR3-211ENST00000533370 TRIM52Q96A61 297 aa18.05■□□□□ 0.48
TGFBR3-211ENST00000533370 GCC2Q8IWJ2 1684 aa18.05■□□□□ 0.48
TGFBR3-211ENST00000533370 ANKRD50Q9ULJ7 1429 aa18.04■□□□□ 0.48
TGFBR3-211ENST00000533370 TEX14Q8IWB6 1497 aa18.02■□□□□ 0.48
TGFBR3-211ENST00000533370 ZNF518AQ6AHZ1 1483 aa18.01■□□□□ 0.47
TGFBR3-211ENST00000533370 DENND4BO75064 1496 aaPredicted RBP18.01■□□□□ 0.47
TGFBR3-211ENST00000533370 MYT1LQ9UL68 1186 aa18■□□□□ 0.47
TGFBR3-211ENST00000533370 POGZQ7Z3K3 1410 aa17.99■□□□□ 0.47
TGFBR3-211ENST00000533370 KDM6BO15054 1643 aa17.98■□□□□ 0.47
TGFBR3-211ENST00000533370 MPHOSPH9Q99550 1183 aa17.98■□□□□ 0.47
TGFBR3-211ENST00000533370 PLXNC1O60486 1568 aa17.98■□□□□ 0.47
TGFBR3-211ENST00000533370 RAPGEF3O95398 923 aa17.97■□□□□ 0.47
TGFBR3-211ENST00000533370 DUOX2Q9NRD8 1548 aa17.97■□□□□ 0.47
TGFBR3-211ENST00000533370 MLH3Q9UHC1 1453 aa17.95■□□□□ 0.46
TGFBR3-211ENST00000533370 HOXD11P31277 338 aaPredicted RBP17.95■□□□□ 0.46
TGFBR3-211ENST00000533370 FOXD4L1Q9NU39 408 aa17.94■□□□□ 0.46
TGFBR3-211ENST00000533370 ATP7AQ04656 1500 aa17.93■□□□□ 0.46
TGFBR3-211ENST00000533370 ZFYVE16Q7Z3T8 1539 aa17.93■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms