RNA–Protein interactions for RNA: ENST00000533167.5

PMS2P3-208, Transcript of PMS1 homolog 2, mismatch repair system component pseudogene 3, humanhuman

TSL 1 (best)

Gene PMS2P3, Length 637 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS2P3-208ENST00000533167 PTPN23Q9H3S7 1636 aa13.05□□□□□ -0.32
PMS2P3-208ENST00000533167 MBD5Q9P267 1494 aa13.04□□□□□ -0.32
PMS2P3-208ENST00000533167 PCGF6Q9BYE7 350 aa13.04□□□□□ -0.32
PMS2P3-208ENST00000533167 CD109Q6YHK3 1445 aa13.04□□□□□ -0.32
PMS2P3-208ENST00000533167 CAMSAP2Q08AD1 1489 aa13.04□□□□□ -0.32
PMS2P3-208ENST00000533167 ITSN2Q9NZM3 1697 aa13.03□□□□□ -0.32
PMS2P3-208ENST00000533167 CDC42BPBQ9Y5S2 1711 aa13.03□□□□□ -0.32
PMS2P3-208ENST00000533167 KIAA1107Q9UPP5 1409 aa13.03□□□□□ -0.32
PMS2P3-208ENST00000533167 ARHGEF12Q9NZN5 1544 aa13.03□□□□□ -0.32
PMS2P3-208ENST00000533167 SAMD9LQ8IVG5 1584 aa13.03□□□□□ -0.32
PMS2P3-208ENST00000533167 ABCC5O15440 1437 aa13.02□□□□□ -0.33
PMS2P3-208ENST00000533167 MAP3K4Q9Y6R4 1608 aa13.02□□□□□ -0.33
PMS2P3-208ENST00000533167 EFCAB2Q5VUJ9 269 aa13.01□□□□□ -0.33
PMS2P3-208ENST00000533167 ARHGAP5Q13017 1502 aa13□□□□□ -0.33
PMS2P3-208ENST00000533167 FAM69CQ0P6D2 419 aa13□□□□□ -0.33
PMS2P3-208ENST00000533167 FAM50AQ14320 339 aaKnown RBP13□□□□□ -0.33
PMS2P3-208ENST00000533167 MYO5CQ9NQX4 1742 aa12.99□□□□□ -0.33
PMS2P3-208ENST00000533167 FANCAO15360 1455 aa12.99□□□□□ -0.33
PMS2P3-208ENST00000533167 ABCC1P33527 1531 aa12.98□□□□□ -0.33
PMS2P3-208ENST00000533167 PLEKHH2Q8IVE3 1493 aa12.98□□□□□ -0.33
PMS2P3-208ENST00000533167 DAPK1P53355 1430 aa12.98□□□□□ -0.33
PMS2P3-208ENST00000533167 ARHGEF5Q12774 1597 aa12.98□□□□□ -0.33
PMS2P3-208ENST00000533167 NEO1Q92859 1461 aa12.97□□□□□ -0.33
PMS2P3-208ENST00000533167 AKNAQ7Z591 1439 aa12.96□□□□□ -0.33
PMS2P3-208ENST00000533167 TRAPPC8Q9Y2L5 1435 aa12.96□□□□□ -0.33
PMS2P3-208ENST00000533167 DNMT1P26358 1616 aaKnown RBP12.96□□□□□ -0.33
PMS2P3-208ENST00000533167 ZNF777Q9ULD5 760 aaPredicted RBP12.96□□□□□ -0.33
PMS2P3-208ENST00000533167 PPRC1Q5VV67 1664 aaKnown RBP12.96□□□□□ -0.34
PMS2P3-208ENST00000533167 SYCP2Q9BX26 1530 aa12.95□□□□□ -0.34
PMS2P3-208ENST00000533167 HNRNPMP52272 730 aaKnown RBP eCLIP12.95□□□□□ -0.34
PMS2P3-208ENST00000533167 SHANK2Q9UPX8 1470 aa12.95□□□□□ -0.34
PMS2P3-208ENST00000533167 KIF13AQ9H1H9 1805 aa12.95□□□□□ -0.34
PMS2P3-208ENST00000533167 CCDC141Q6ZP82 1450 aa12.94□□□□□ -0.34
PMS2P3-208ENST00000533167 ROCK1Q13464 1354 aa12.94□□□□□ -0.34
PMS2P3-208ENST00000533167 ADGRL2O95490 1459 aa12.93□□□□□ -0.34
PMS2P3-208ENST00000533167 RSPH4AQ5TD94 716 aa12.93□□□□□ -0.34
PMS2P3-208ENST00000533167 SCAPERQ9BY12 1400 aa12.93□□□□□ -0.34
PMS2P3-208ENST00000533167 ADGRL1O94910 1474 aa12.92□□□□□ -0.34
PMS2P3-208ENST00000533167 HFM1A2PYH4 1435 aa12.92□□□□□ -0.34
PMS2P3-208ENST00000533167 NAIPQ13075 1403 aa12.91□□□□□ -0.34
PMS2P3-208ENST00000533167 NCOA1Q15788 1441 aa12.91□□□□□ -0.34
PMS2P3-208ENST00000533167 ITGAEP38570 1179 aa12.91□□□□□ -0.34
PMS2P3-208ENST00000533167 MAST1Q9Y2H9 1570 aa12.9□□□□□ -0.34
PMS2P3-208ENST00000533167 C9orf84Q5VXU9 1444 aa12.9□□□□□ -0.34
PMS2P3-208ENST00000533167 POGZQ7Z3K3 1410 aa12.9□□□□□ -0.34
PMS2P3-208ENST00000533167 COL17A1Q9UMD9 1497 aaPredicted RBP12.9□□□□□ -0.34
PMS2P3-208ENST00000533167 AFAP1Q8N556 730 aa12.89□□□□□ -0.35
PMS2P3-208ENST00000533167 TEX14Q8IWB6 1497 aa12.89□□□□□ -0.35
PMS2P3-208ENST00000533167 CFAP74Q9C0B2 1584 aa12.89□□□□□ -0.35
PMS2P3-208ENST00000533167 CROCC2H7BZ55 1655 aa12.89□□□□□ -0.35
PMS2P3-208ENST00000533167 KDM5CP41229 1560 aa12.88□□□□□ -0.35
PMS2P3-208ENST00000533167 RTEL1-TNFRSF6BF6WH68 1400 aa12.88□□□□□ -0.35
PMS2P3-208ENST00000533167 DENND4BO75064 1496 aaPredicted RBP12.87□□□□□ -0.35
PMS2P3-208ENST00000533167 FRMPD1Q5SYB0 1578 aa12.86□□□□□ -0.35
PMS2P3-208ENST00000533167 CHIC2Q9UKJ5 165 aa12.86□□□□□ -0.35
PMS2P3-208ENST00000533167 ZFYVE16Q7Z3T8 1539 aa12.86□□□□□ -0.35
PMS2P3-208ENST00000533167 SETD5Q9C0A6 1442 aa12.86□□□□□ -0.35
PMS2P3-208ENST00000533167 ZNF518AQ6AHZ1 1483 aa12.85□□□□□ -0.35
PMS2P3-208ENST00000533167 MLH3Q9UHC1 1453 aa12.85□□□□□ -0.35
PMS2P3-208ENST00000533167 HRCP23327 699 aa12.85□□□□□ -0.35
PMS2P3-208ENST00000533167 INO80Q9ULG1 1556 aaPredicted RBP12.85□□□□□ -0.35
PMS2P3-208ENST00000533167 ANKRD30AQ9BXX3 1397 aa12.84□□□□□ -0.35
PMS2P3-208ENST00000533167 RAB3GAP2Q9H2M9 1393 aa12.84□□□□□ -0.35
PMS2P3-208ENST00000533167 TSPY4P0CV99 314 aa12.84□□□□□ -0.35
PMS2P3-208ENST00000533167 TSPY10P0CW01 314 aa12.84□□□□□ -0.35
PMS2P3-208ENST00000533167 RRP7BPQ9NSQ0 103 aa12.84□□□□□ -0.35
PMS2P3-208ENST00000533167 RAPGEF3O95398 923 aa12.83□□□□□ -0.36
PMS2P3-208ENST00000533167 SPAG9O60271 1321 aaKnown RBP12.83□□□□□ -0.36
PMS2P3-208ENST00000533167 ZMYM4Q5VZL5 1548 aa12.83□□□□□ -0.36
PMS2P3-208ENST00000533167 PLXNC1O60486 1568 aa12.82□□□□□ -0.36
PMS2P3-208ENST00000533167 KIF15Q9NS87 1388 aa12.81□□□□□ -0.36
PMS2P3-208ENST00000533167 KDM6BO15054 1643 aa12.81□□□□□ -0.36
PMS2P3-208ENST00000533167 RICTORQ6R327 1708 aa12.81□□□□□ -0.36
PMS2P3-208ENST00000533167 ATP7AQ04656 1500 aa12.81□□□□□ -0.36
PMS2P3-208ENST00000533167 GCC2Q8IWJ2 1684 aa12.8□□□□□ -0.36
PMS2P3-208ENST00000533167 TRHP20396 242 aaPredicted RBP12.79□□□□□ -0.36
PMS2P3-208ENST00000533167 ADGBQ8N7X0 1667 aa12.79□□□□□ -0.36
PMS2P3-208ENST00000533167 KIDINS220Q9ULH0 1771 aa12.79□□□□□ -0.36
PMS2P3-208ENST00000533167 ANKRD50Q9ULJ7 1429 aa12.79□□□□□ -0.36
PMS2P3-208ENST00000533167 YEATS2Q9ULM3 1422 aa12.79□□□□□ -0.36
PMS2P3-208ENST00000533167 TSPOAP1O95153 1857 aa12.78□□□□□ -0.36
PMS2P3-208ENST00000533167 HECW2Q9P2P5 1572 aa12.77□□□□□ -0.36
PMS2P3-208ENST00000533167 MAGI2Q86UL8 1455 aa12.77□□□□□ -0.37
PMS2P3-208ENST00000533167 DUOX2Q9NRD8 1548 aa12.77□□□□□ -0.37
PMS2P3-208ENST00000533167 DHX57Q6P158 1386 aaKnown RBP12.76□□□□□ -0.37
PMS2P3-208ENST00000533167 DHX29Q7Z478 1369 aaKnown RBP12.76□□□□□ -0.37
PMS2P3-208ENST00000533167 ERBINQ96RT1 1412 aa12.76□□□□□ -0.37
PMS2P3-208ENST00000533167 DIP2CQ9Y2E4 1556 aa12.75□□□□□ -0.37
PMS2P3-208ENST00000533167 ABCA6Q8N139 1617 aa12.74□□□□□ -0.37
PMS2P3-208ENST00000533167 A2MP01023 1474 aa12.73□□□□□ -0.37
PMS2P3-208ENST00000533167 KDM5DQ9BY66 1539 aa12.72□□□□□ -0.37
PMS2P3-208ENST00000533167 PZPP20742 1482 aa12.72□□□□□ -0.37
PMS2P3-208ENST00000533167 REREQ9P2R6 1566 aa12.71□□□□□ -0.37
PMS2P3-208ENST00000533167 ATP10AO60312 1499 aa12.7□□□□□ -0.38
PMS2P3-208ENST00000533167 UNC13BO14795 1591 aa12.69□□□□□ -0.38
PMS2P3-208ENST00000533167 ACIN1Q9UKV3 1341 aaKnown RBP12.69□□□□□ -0.38
PMS2P3-208ENST00000533167 ARHGEF40Q8TER5 1519 aa12.69□□□□□ -0.38
PMS2P3-208ENST00000533167 MROH1Q8NDA8 1641 aa12.69□□□□□ -0.38
PMS2P3-208ENST00000533167 AGLP35573 1532 aa12.68□□□□□ -0.38
PMS2P3-208ENST00000533167 VWDEQ8N2E2 1590 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms